PDB Short entry for 2B6S HEADER SIGNALING PROTEIN 03-OCT-05 2B6S TITLE HOMOLOGY MODEL OF THE HUMAN P2Y11 RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: P2Y PURINOCEPTOR 11; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: P2Y11 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN KEYWDS P2Y, G-PROTEIN COUPLED RECEPTOR, TRANSMEMBRANE, NUCLEOTIDE R EXPDTA THEORETICAL MODEL AUTHOR S.COSTANZI REVDAT 1 01-NOV-05 2B6S 0 JRNL AUTH S.COSTANZI,L.MAMEDOVA,Z.G.GAO,K.A.JACOBSON JRNL TITL ARCHITECTURE OF P2Y NUCLEOTIDE RECEPTORS: JRNL TITL 2 STRUCTURAL COMPARISON BASED ON SEQUENCE ANALYSIS, JRNL TITL 3 MUTAGENESIS AND HOMOLOGY MODELING JRNL REF J.MED.CHEM. V. 47 5393 2004 JRNL REFN ASTM JMCMAR US ISSN 0022-2623 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2B6S COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-OCT-2005. REMARK 100 THE RCSB ID CODE IS RCSB034745. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 9 REMARK 465 ALA A 10 REMARK 465 ALA A 11 REMARK 465 ASN A 12 REMARK 465 VAL A 13 REMARK 465 SER A 14 REMARK 465 GLY A 15 REMARK 465 PRO A 334 REMARK 465 SER A 335 REMARK 465 LEU A 336 REMARK 465 GLY A 337 REMARK 465 CYS A 338 REMARK 465 CYS A 339 REMARK 465 CYS A 340 REMARK 465 ARG A 341 REMARK 465 HIS A 342 REMARK 465 CYS A 343 REMARK 465 PRO A 344 REMARK 465 GLY A 345 REMARK 465 TYR A 346 REMARK 465 ARG A 347 REMARK 465 ASP A 348 REMARK 465 SER A 349 REMARK 465 TRP A 350 REMARK 465 ASN A 351 REMARK 465 PRO A 352 REMARK 465 GLU A 353 REMARK 465 ASP A 354 REMARK 465 ALA A 355 REMARK 465 LYS A 356 REMARK 465 SER A 357 REMARK 465 THR A 358 REMARK 465 GLY A 359 REMARK 465 GLN A 360 REMARK 465 ALA A 361 REMARK 465 LEU A 362 REMARK 465 PRO A 363 REMARK 465 LEU A 364 REMARK 465 ASN A 365 REMARK 465 ALA A 366 REMARK 465 THR A 367 REMARK 465 ALA A 368 REMARK 465 ALA A 369 REMARK 465 PRO A 370 REMARK 465 LYS A 371 REMARK 465 PRO A 372 REMARK 465 SER A 373 REMARK 465 GLU A 374 REMARK 465 PRO A 375 REMARK 465 GLN A 376 REMARK 465 SER A 377 REMARK 465 ARG A 378 REMARK 465 GLU A 379 REMARK 465 LEU A 380 REMARK 465 SER A 381 REMARK 465 GLN A 382 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 101 -41.85 94.68 REMARK 500 PHE A 143 163.99 86.42 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 100 LYS A 101 142.96 REMARK 500 HIS A 141 PRO A 142 145.17 REMARK 500 GLN A 182 GLN A 183 -142.79 REMARK 500 PRO A 193 GLU A 194 148.42 REMARK 500 CYS A 196 ILE A 197 148.55 REMARK 500 SER A 287 THR A 288 147.66 REMARK 500 PRO A 307 TYR A 308 -148.54 DBREF 2B6S A 9 382 UNP Q96G91 P2Y11_HUMAN 1 374 SEQRES 1 A 374 MET ALA ALA ASN VAL SER GLY ALA LYS SER CYS PRO ALA SEQRES 2 A 374 ASN PHE LEU ALA ALA ALA ASP ASP LYS LEU SER GLY PHE SEQRES 3 A 374 GLN GLY ASP PHE LEU TRP PRO ILE LEU VAL VAL GLU PHE SEQRES 4 A 374 LEU VAL ALA VAL ALA SER ASN GLY LEU ALA LEU TYR ARG SEQRES 5 A 374 PHE SER ILE ARG LYS GLN ARG PRO TRP HIS PRO ALA VAL SEQRES 6 A 374 VAL PHE SER VAL GLN LEU ALA VAL SER ASP LEU LEU CYS SEQRES 7 A 374 ALA LEU THR LEU PRO PRO LEU ALA ALA TYR LEU TYR PRO SEQRES 8 A 374 PRO LYS HIS TRP ARG TYR GLY GLU ALA ALA CYS ARG LEU SEQRES 9 A 374 GLU ARG PHE LEU PHE THR CYS ASN LEU LEU GLY SER VAL SEQRES 10 A 374 ILE PHE ILE THR CYS ILE SER LEU ASN ARG TYR LEU GLY SEQRES 11 A 374 ILE VAL HIS PRO PHE PHE ALA ARG SER HIS LEU ARG PRO SEQRES 12 A 374 LYS HIS ALA TRP ALA VAL SER ALA ALA GLY TRP VAL LEU SEQRES 13 A 374 ALA ALA LEU LEU ALA MET PRO THR LEU SER PHE SER HIS SEQRES 14 A 374 LEU LYS ARG PRO GLN GLN GLY ALA GLY ASN CYS SER VAL SEQRES 15 A 374 ALA ARG PRO GLU ALA CYS ILE LYS CYS LEU GLY THR ALA SEQRES 16 A 374 ASP HIS GLY LEU ALA ALA TYR ARG ALA TYR SER LEU VAL SEQRES 17 A 374 LEU ALA GLY LEU GLY CYS GLY LEU PRO LEU LEU LEU THR SEQRES 18 A 374 LEU ALA ALA TYR GLY ALA LEU GLY ARG ALA VAL LEU ARG SEQRES 19 A 374 SER PRO GLY MET THR VAL ALA GLU LYS LEU ARG VAL ALA SEQRES 20 A 374 ALA LEU VAL ALA SER GLY VAL ALA LEU TYR ALA SER SER SEQRES 21 A 374 TYR VAL PRO TYR HIS ILE MET ARG VAL LEU ASN VAL ASP SEQRES 22 A 374 ALA ARG ARG ARG TRP SER THR ARG CYS PRO SER PHE ALA SEQRES 23 A 374 ASP ILE ALA GLN ALA THR ALA ALA LEU GLU LEU GLY PRO SEQRES 24 A 374 TYR VAL GLY TYR GLN VAL MET ARG GLY LEU MET PRO LEU SEQRES 25 A 374 ALA PHE CYS VAL HIS PRO LEU LEU TYR MET ALA ALA VAL SEQRES 26 A 374 PRO SER LEU GLY CYS CYS CYS ARG HIS CYS PRO GLY TYR SEQRES 27 A 374 ARG ASP SER TRP ASN PRO GLU ASP ALA LYS SER THR GLY SEQRES 28 A 374 GLN ALA LEU PRO LEU ASN ALA THR ALA ALA PRO LYS PRO SEQRES 29 A 374 SER GLU PRO GLN SER ARG GLU LEU SER GLN HELIX 1 1 CYS A 19 PHE A 23 5 5 HELIX 2 2 PHE A 34 ILE A 63 1 30 HELIX 3 3 HIS A 70 LEU A 90 1 21 HELIX 4 4 LEU A 90 TYR A 98 1 9 HELIX 5 5 GLY A 106 GLY A 138 1 33 HELIX 6 6 ARG A 150 MET A 170 1 21 HELIX 7 7 MET A 170 PHE A 175 1 6 HELIX 8 8 ALA A 209 CYS A 222 1 14 HELIX 9 9 CYS A 222 GLY A 237 1 16 HELIX 10 10 VAL A 248 ALA A 282 1 35 HELIX 11 11 GLY A 310 MET A 318 1 9 HELIX 12 12 LEU A 320 VAL A 333 1 14 SHEET 1 A 2 LYS A 179 PRO A 181 0 SHEET 2 A 2 CYS A 188 VAL A 190 -1 O SER A 189 N ARG A 180 SSBOND 1 CYS A 19 CYS A 290 SSBOND 2 CYS A 110 CYS A 188 CISPEP 1 GLY A 245 MET A 246 0 9.72 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000