PDB Short entry for 2BBS HEADER TRANSPORT PROTEIN 17-OCT-05 2BBS TITLE HUMAN DELTAF508 NBD1 WITH THREE SOLUBILIZING MUTATIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 389-678; COMPND 5 SYNONYM: CFTR, CAMP-DEPENDENT CHLORIDE CHANNEL; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CFTR, ABCC7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON+RIL.; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET26B-DERIVED KEYWDS ATP BINDING CASSETTE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.A.LEWIS,M.C.KEARINS,K.CONNERS,X.ZHAO,F.LU,J.M.SAUDER,S.EMTAGE REVDAT 7 23-AUG-23 2BBS 1 REMARK REVDAT 6 20-OCT-21 2BBS 1 REMARK SEQADV LINK REVDAT 5 14-NOV-18 2BBS 1 AUTHOR REVDAT 4 18-OCT-17 2BBS 1 REMARK REVDAT 3 16-FEB-10 2BBS 1 JRNL REVDAT 2 24-FEB-09 2BBS 1 VERSN REVDAT 1 01-NOV-05 2BBS 0 JRNL AUTH H.A.LEWIS,C.WANG,X.ZHAO,Y.HAMURO,K.CONNERS,M.C.KEARINS,F.LU, JRNL AUTH 2 J.M.SAUDER,K.S.MOLNAR,S.J.COALES,P.C.MALONEY,W.B.GUGGINO, JRNL AUTH 3 D.R.WETMORE,P.C.WEBER,J.F.HUNT JRNL TITL STRUCTURE AND DYNAMICS OF NBD1 FROM CFTR CHARACTERIZED USING JRNL TITL 2 CRYSTALLOGRAPHY AND HYDROGEN/DEUTERIUM EXCHANGE MASS JRNL TITL 3 SPECTROMETRY. JRNL REF J.MOL.BIOL. V. 396 406 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 19944699 JRNL DOI 10.1016/J.JMB.2009.11.051 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH-HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 31918 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1608 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3822 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 313 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.31800 REMARK 3 B22 (A**2) : -0.53100 REMARK 3 B33 (A**2) : -0.78700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; 0.011 ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; 1.384 ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; 5.540 ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; 0.092 ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; 0.004 ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; 0.951 ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; 1.688 ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; 1.929 ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; 3.030 ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT CORRECTION REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2BBS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-OCT-05. REMARK 100 THE DEPOSITION ID IS D_1000034914. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-05 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31918 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 28.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1XMJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 39% PEG4000, 0.1M LICL, 50MM TRIS, PH REMARK 280 9.0, 3MM ATP, 5MM MGCL2, 2MM TCEP, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 280K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.46850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.26550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.11250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.26550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.46850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.11250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 414 REMARK 465 ASN A 415 REMARK 465 ASN A 416 REMARK 465 ASN A 417 REMARK 465 ASN A 418 REMARK 465 ARG A 419 REMARK 465 LYS A 420 REMARK 465 THR A 421 REMARK 465 SER A 422 REMARK 465 ASN A 423 REMARK 465 GLY A 424 REMARK 465 ASP A 425 REMARK 465 ASP A 426 REMARK 465 SER A 427 REMARK 465 LEU A 428 REMARK 465 SER A 429 REMARK 465 PHE A 430 REMARK 465 SER A 431 REMARK 465 ASN A 432 REMARK 465 PHE A 433 REMARK 465 SER A 434 REMARK 465 LEU A 435 REMARK 465 LEU A 436 REMARK 465 GLY A 542 REMARK 465 GLU A 543 REMARK 465 GLY A 544 REMARK 465 GLY A 545 REMARK 465 GLY A 646 REMARK 465 CYS A 647 REMARK 465 ASP A 648 REMARK 465 GLU A 672 REMARK 465 GLY A 673 REMARK 465 ASP A 674 REMARK 465 ALA A 675 REMARK 465 PRO A 676 REMARK 465 VAL A 677 REMARK 465 SER A 678 REMARK 465 SER B 388 REMARK 465 GLU B 402 REMARK 465 GLU B 403 REMARK 465 GLY B 404 REMARK 465 PHE B 405 REMARK 465 GLY B 406 REMARK 465 GLU B 407 REMARK 465 LEU B 408 REMARK 465 PHE B 409 REMARK 465 GLU B 410 REMARK 465 LYS B 411 REMARK 465 ALA B 412 REMARK 465 LYS B 413 REMARK 465 GLN B 414 REMARK 465 ASN B 415 REMARK 465 ASN B 416 REMARK 465 ASN B 417 REMARK 465 ASN B 418 REMARK 465 ARG B 419 REMARK 465 LYS B 420 REMARK 465 THR B 421 REMARK 465 SER B 422 REMARK 465 ASN B 423 REMARK 465 GLY B 424 REMARK 465 ASP B 425 REMARK 465 ASP B 426 REMARK 465 SER B 427 REMARK 465 LEU B 428 REMARK 465 SER B 429 REMARK 465 PHE B 430 REMARK 465 SER B 431 REMARK 465 ASN B 432 REMARK 465 PHE B 433 REMARK 465 SER B 434 REMARK 465 LEU B 435 REMARK 465 LEU B 436 REMARK 465 GLY B 437 REMARK 465 THR B 438 REMARK 465 PRO B 439 REMARK 465 GLU B 543 REMARK 465 GLY B 544 REMARK 465 PRO B 638 REMARK 465 ASP B 639 REMARK 465 PHE B 640 REMARK 465 SER B 641 REMARK 465 SER B 642 REMARK 465 LYS B 643 REMARK 465 LEU B 644 REMARK 465 MET B 645 REMARK 465 GLY B 646 REMARK 465 CYS B 647 REMARK 465 LEU B 671 REMARK 465 GLU B 672 REMARK 465 GLY B 673 REMARK 465 ASP B 674 REMARK 465 ALA B 675 REMARK 465 PRO B 676 REMARK 465 VAL B 677 REMARK 465 SER B 678 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE B 546 CG1 CG2 CD1 REMARK 470 LEU B 636 CG CD1 CD2 REMARK 470 GLU B 664 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 159 O HOH B 250 2.15 REMARK 500 O HOH A 46 O HOH A 210 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 412 34.67 -61.99 REMARK 500 LYS A 536 -130.35 52.26 REMARK 500 CYS A 590 -64.76 -92.48 REMARK 500 LYS A 593 -64.40 -107.83 REMARK 500 LYS B 536 -143.41 52.54 REMARK 500 TYR B 577 17.94 56.20 REMARK 500 CYS B 590 -63.56 -93.24 REMARK 500 LYS B 593 -72.73 -102.11 REMARK 500 SER B 649 -22.41 -146.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 3 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 1 O2G REMARK 620 2 ATP A 1 O2B 87.4 REMARK 620 3 HOH A 7 O 89.3 93.2 REMARK 620 4 HOH A 202 O 90.1 87.0 179.4 REMARK 620 5 THR A 465 OG1 177.5 90.1 90.3 90.3 REMARK 620 6 GLN A 493 OE1 96.0 170.6 95.6 84.3 86.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 4 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP B 2 O2B REMARK 620 2 ATP B 2 O2G 83.1 REMARK 620 3 HOH B 8 O 89.2 88.6 REMARK 620 4 HOH B 203 O 98.7 87.6 170.8 REMARK 620 5 THR B 465 OG1 94.4 173.6 85.5 98.6 REMARK 620 6 GLN B 493 OE1 170.6 91.8 82.7 89.0 89.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BBO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NBD1 WITH PHE508 REMARK 900 RELATED ID: 2BBT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN DELTAF508 NBD1 WITH TWO SOLUBLIZING REMARK 900 MUTATIONS. DBREF 2BBS A 389 677 UNP P13569 CFTR_HUMAN 389 678 DBREF 2BBS B 389 677 UNP P13569 CFTR_HUMAN 389 678 SEQADV 2BBS SER A 388 UNP P13569 THR 388 CLONING ARTIFACT SEQADV 2BBS SER A 429 UNP P13569 PHE 429 ENGINEERED MUTATION SEQADV 2BBS ASN A 494 UNP P13569 PHE 494 ENGINEERED MUTATION SEQADV 2BBS A UNP P13569 PHE 508 DELETION SEQADV 2BBS ARG A 553 UNP P13569 GLN 637 ENGINEERED MUTATION SEQADV 2BBS SER B 388 UNP P13569 THR 388 CLONING ARTIFACT SEQADV 2BBS SER B 429 UNP P13569 PHE 429 ENGINEERED MUTATION SEQADV 2BBS ASN B 494 UNP P13569 PHE 494 ENGINEERED MUTATION SEQADV 2BBS B UNP P13569 PHE 508 DELETION SEQADV 2BBS ARG B 553 UNP P13569 GLN 637 ENGINEERED MUTATION SEQRES 1 A 290 SER THR THR GLU VAL VAL MET GLU ASN VAL THR ALA PHE SEQRES 2 A 290 TRP GLU GLU GLY PHE GLY GLU LEU PHE GLU LYS ALA LYS SEQRES 3 A 290 GLN ASN ASN ASN ASN ARG LYS THR SER ASN GLY ASP ASP SEQRES 4 A 290 SER LEU SER PHE SER ASN PHE SER LEU LEU GLY THR PRO SEQRES 5 A 290 VAL LEU LYS ASP ILE ASN PHE LYS ILE GLU ARG GLY GLN SEQRES 6 A 290 LEU LEU ALA VAL ALA GLY SER THR GLY ALA GLY LYS THR SEQRES 7 A 290 SER LEU LEU MET MET ILE MET GLY GLU LEU GLU PRO SER SEQRES 8 A 290 GLU GLY LYS ILE LYS HIS SER GLY ARG ILE SER PHE CYS SEQRES 9 A 290 SER GLN ASN SER TRP ILE MET PRO GLY THR ILE LYS GLU SEQRES 10 A 290 ASN ILE ILE GLY VAL SER TYR ASP GLU TYR ARG TYR ARG SEQRES 11 A 290 SER VAL ILE LYS ALA CYS GLN LEU GLU GLU ASP ILE SER SEQRES 12 A 290 LYS PHE ALA GLU LYS ASP ASN ILE VAL LEU GLY GLU GLY SEQRES 13 A 290 GLY ILE THR LEU SER GLY GLY GLN ARG ALA ARG ILE SER SEQRES 14 A 290 LEU ALA ARG ALA VAL TYR LYS ASP ALA ASP LEU TYR LEU SEQRES 15 A 290 LEU ASP SER PRO PHE GLY TYR LEU ASP VAL LEU THR GLU SEQRES 16 A 290 LYS GLU ILE PHE GLU SER CYS VAL CYS LYS LEU MET ALA SEQRES 17 A 290 ASN LYS THR ARG ILE LEU VAL THR SER LYS MET GLU HIS SEQRES 18 A 290 LEU LYS LYS ALA ASP LYS ILE LEU ILE LEU HIS GLU GLY SEQRES 19 A 290 SER SER TYR PHE TYR GLY THR PHE SER GLU LEU GLN ASN SEQRES 20 A 290 LEU ARG PRO ASP PHE SER SER LYS LEU MET GLY CYS ASP SEQRES 21 A 290 SER PHE ASP GLN PHE SER ALA GLU ARG ARG ASN SER ILE SEQRES 22 A 290 LEU THR GLU THR LEU HIS ARG PHE SER LEU GLU GLY ASP SEQRES 23 A 290 ALA PRO VAL SER SEQRES 1 B 290 SER THR THR GLU VAL VAL MET GLU ASN VAL THR ALA PHE SEQRES 2 B 290 TRP GLU GLU GLY PHE GLY GLU LEU PHE GLU LYS ALA LYS SEQRES 3 B 290 GLN ASN ASN ASN ASN ARG LYS THR SER ASN GLY ASP ASP SEQRES 4 B 290 SER LEU SER PHE SER ASN PHE SER LEU LEU GLY THR PRO SEQRES 5 B 290 VAL LEU LYS ASP ILE ASN PHE LYS ILE GLU ARG GLY GLN SEQRES 6 B 290 LEU LEU ALA VAL ALA GLY SER THR GLY ALA GLY LYS THR SEQRES 7 B 290 SER LEU LEU MET MET ILE MET GLY GLU LEU GLU PRO SER SEQRES 8 B 290 GLU GLY LYS ILE LYS HIS SER GLY ARG ILE SER PHE CYS SEQRES 9 B 290 SER GLN ASN SER TRP ILE MET PRO GLY THR ILE LYS GLU SEQRES 10 B 290 ASN ILE ILE GLY VAL SER TYR ASP GLU TYR ARG TYR ARG SEQRES 11 B 290 SER VAL ILE LYS ALA CYS GLN LEU GLU GLU ASP ILE SER SEQRES 12 B 290 LYS PHE ALA GLU LYS ASP ASN ILE VAL LEU GLY GLU GLY SEQRES 13 B 290 GLY ILE THR LEU SER GLY GLY GLN ARG ALA ARG ILE SER SEQRES 14 B 290 LEU ALA ARG ALA VAL TYR LYS ASP ALA ASP LEU TYR LEU SEQRES 15 B 290 LEU ASP SER PRO PHE GLY TYR LEU ASP VAL LEU THR GLU SEQRES 16 B 290 LYS GLU ILE PHE GLU SER CYS VAL CYS LYS LEU MET ALA SEQRES 17 B 290 ASN LYS THR ARG ILE LEU VAL THR SER LYS MET GLU HIS SEQRES 18 B 290 LEU LYS LYS ALA ASP LYS ILE LEU ILE LEU HIS GLU GLY SEQRES 19 B 290 SER SER TYR PHE TYR GLY THR PHE SER GLU LEU GLN ASN SEQRES 20 B 290 LEU ARG PRO ASP PHE SER SER LYS LEU MET GLY CYS ASP SEQRES 21 B 290 SER PHE ASP GLN PHE SER ALA GLU ARG ARG ASN SER ILE SEQRES 22 B 290 LEU THR GLU THR LEU HIS ARG PHE SER LEU GLU GLY ASP SEQRES 23 B 290 ALA PRO VAL SER HET MG A 3 1 HET ATP A 1 31 HET MG B 4 1 HET ATP B 2 31 HETNAM MG MAGNESIUM ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 3 MG 2(MG 2+) FORMUL 4 ATP 2(C10 H16 N5 O13 P3) FORMUL 7 HOH *313(H2 O) HELIX 1 1 GLU A 402 ALA A 412 1 11 HELIX 2 2 GLY A 463 MET A 472 1 10 HELIX 3 3 ILE A 502 GLY A 509 1 7 HELIX 4 4 ASP A 513 CYS A 524 1 12 HELIX 5 5 LEU A 526 LYS A 532 1 7 HELIX 6 6 GLU A 535 ASN A 538 5 4 HELIX 7 7 SER A 549 LYS A 564 1 16 HELIX 8 8 ASP A 579 CYS A 590 1 12 HELIX 9 9 LYS A 606 ALA A 613 1 8 HELIX 10 10 THR A 629 ARG A 637 1 9 HELIX 11 11 ARG A 637 MET A 645 1 9 HELIX 12 12 SER A 649 PHE A 653 5 5 HELIX 13 13 SER A 654 SER A 670 1 17 HELIX 14 14 GLY B 463 MET B 472 1 10 HELIX 15 15 ILE B 502 GLY B 509 1 7 HELIX 16 16 ASP B 513 CYS B 524 1 12 HELIX 17 17 LEU B 526 SER B 531 1 6 HELIX 18 18 GLU B 535 ASN B 538 5 4 HELIX 19 19 SER B 549 LYS B 564 1 16 HELIX 20 20 ASP B 579 CYS B 590 1 12 HELIX 21 21 LYS B 606 ALA B 613 1 8 HELIX 22 22 THR B 629 ARG B 637 1 9 HELIX 23 23 SER B 649 PHE B 653 5 5 HELIX 24 24 SER B 654 PHE B 669 1 16 SHEET 1 A 3 LEU A 441 ILE A 448 0 SHEET 2 A 3 VAL A 392 ALA A 399 -1 N VAL A 392 O ILE A 448 SHEET 3 A 3 PRO A 477 LYS A 483 -1 O SER A 478 N THR A 398 SHEET 1 B 6 ILE A 488 CYS A 491 0 SHEET 2 B 6 LEU A 568 ASP A 572 1 O LEU A 570 N SER A 489 SHEET 3 B 6 THR A 599 VAL A 603 1 O ILE A 601 N LEU A 571 SHEET 4 B 6 LEU A 453 GLY A 458 1 N VAL A 456 O LEU A 602 SHEET 5 B 6 LYS A 615 HIS A 620 1 O LEU A 619 N ALA A 457 SHEET 6 B 6 SER A 623 GLY A 628 -1 O PHE A 626 N ILE A 618 SHEET 1 C 2 GLY A 500 THR A 501 0 SHEET 2 C 2 VAL A 540 LEU A 541 -1 O LEU A 541 N GLY A 500 SHEET 1 D 3 LEU B 441 ILE B 448 0 SHEET 2 D 3 VAL B 392 ALA B 399 -1 N VAL B 397 O ILE B 444 SHEET 3 D 3 PRO B 477 LYS B 483 -1 O LYS B 483 N VAL B 393 SHEET 1 E 6 ILE B 488 CYS B 491 0 SHEET 2 E 6 LEU B 568 ASP B 572 1 O LEU B 570 N CYS B 491 SHEET 3 E 6 THR B 599 VAL B 603 1 O ILE B 601 N LEU B 571 SHEET 4 E 6 LEU B 453 GLY B 458 1 N VAL B 456 O LEU B 602 SHEET 5 E 6 LYS B 615 HIS B 620 1 O LEU B 619 N ALA B 457 SHEET 6 E 6 SER B 623 GLY B 628 -1 O TYR B 625 N ILE B 618 SHEET 1 F 2 GLY B 500 THR B 501 0 SHEET 2 F 2 VAL B 540 LEU B 541 -1 O LEU B 541 N GLY B 500 LINK O2G ATP A 1 MG MG A 3 1555 1555 2.03 LINK O2B ATP A 1 MG MG A 3 1555 1555 2.03 LINK MG MG A 3 O HOH A 7 1555 1555 2.15 LINK MG MG A 3 O HOH A 202 1555 1555 2.20 LINK MG MG A 3 OG1 THR A 465 1555 1555 2.02 LINK MG MG A 3 OE1 GLN A 493 1555 1555 2.07 LINK O2B ATP B 2 MG MG B 4 1555 1555 2.01 LINK O2G ATP B 2 MG MG B 4 1555 1555 2.13 LINK MG MG B 4 O HOH B 8 1555 1555 1.99 LINK MG MG B 4 O HOH B 203 1555 1555 2.10 LINK MG MG B 4 OG1 THR B 465 1555 1555 2.01 LINK MG MG B 4 OE1 GLN B 493 1555 1555 2.07 SITE 1 AC1 5 ATP A 1 HOH A 7 HOH A 202 THR A 465 SITE 2 AC1 5 GLN A 493 SITE 1 AC2 5 ATP B 2 HOH B 8 HOH B 203 THR B 465 SITE 2 AC2 5 GLN B 493 SITE 1 AC3 23 MG A 3 HOH A 7 HOH A 28 HOH A 88 SITE 2 AC3 23 HOH A 130 HOH A 141 HOH A 202 HOH A 224 SITE 3 AC3 23 HOH A 240 HOH A 254 TRP A 401 VAL A 440 SITE 4 AC3 23 THR A 460 GLY A 461 ALA A 462 GLY A 463 SITE 5 AC3 23 LYS A 464 THR A 465 SER A 466 GLN A 493 SITE 6 AC3 23 HOH B 65 HOH B 140 ASN B 597 SITE 1 AC4 15 HOH A 93 ASN A 597 MG B 4 HOH B 8 SITE 2 AC4 15 HOH B 203 HOH B 259 TRP B 401 VAL B 440 SITE 3 AC4 15 GLY B 461 ALA B 462 GLY B 463 LYS B 464 SITE 4 AC4 15 THR B 465 SER B 466 GLN B 493 CRYST1 62.937 66.225 122.531 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015889 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015100 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008161 0.00000