PDB Short entry for 2BOT
HEADER    CONTRACTILE PROTEIN                     13-APR-05   2BOT              
TITLE     HOMOLOGY-BASED MODEL OF THE DYNEIN COILED-COIL STALK IN THE           
TITLE    2 22:19 CONFIGURATION.                                                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DYNEIN HEAVY CHAIN;                                        
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: STALK, RESIDUES 3197-3296;                                 
COMPND   5 SYNONYM: DYHC, CYTOPLASMIC DYNEIN HEAVY CHAIN 1, DYHC1;              
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: DYNEIN HEAVY CHAIN;                                        
COMPND   8 CHAIN: B;                                                            
COMPND   9 FRAGMENT: STALK, RESIDUES 3398-3497;                                 
COMPND  10 SYNONYM: DYHC, CYTOPLASMIC DYNEIN HEAVY CHAIN 1, DYHC1               
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 MOL_ID: 2;                                                           
SOURCE   5 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   6 ORGANISM_COMMON: HUMAN                                               
KEYWDS    DYNEIN STALK, 14 HEPTAD ANTIPARALLEL COILED-COIL, 22:19               
KEYWDS   2 CONFIGURATION, CONTRACTILE PROTEIN                                   
EXPDTA    THEORETICAL MODEL                                                     
AUTHOR    I.R.GIBBONS,J.E.GARBARINO,C.E.TAN,S.L.RECK-PETERSON,                  
AUTHOR   2 R.D.VALE,A.P.CARTER                                                  
REVDAT   2   22-JUN-05 2BOT    1       JRNL                                     
REVDAT   1   18-APR-05 2BOT    0                                                
JRNL        AUTH   I.R.GIBBONS,J.E.GARBARINO,C.E.TAN,                           
JRNL        AUTH 2 S.L.RECK-PETERSON,R.D.VALE,A.P.CARTER                        
JRNL        TITL   THE AFFINITY OF THE DYNEIN MICROTUBULE-BINDING               
JRNL        TITL 2 DOMAIN IS MODULATED BY THE CONFORMATION OF ITS               
JRNL        TITL 3 COILED-COIL STALK                                            
JRNL        REF    J.BIOL.CHEM.                  V. 280 23960 2005              
JRNL        REFN   ASTM JBCHA3  FR ISSN 0021-9258                               
REMARK   1                                                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : NULL                                                 
REMARK   3   AUTHORS     : NULL                                                 
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: ENERGY MINIMIZATION AND MANUAL            
REMARK   3  ADJUSTMENT                                                          
REMARK   4                                                                      
REMARK   4 2BOT COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998                       
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY EBI  ON 14-APR-2005.                
REMARK 100 THE EBI ID CODE IS EBI-23620.                                        
REMARK 220                                                                      
REMARK 220 EXPERIMENTAL DETAILS                                                 
REMARK 220  EXPERIMENT TYPE                : THEORETICAL MODELLING              
REMARK 220                                                                      
REMARK 220 REMARK: THE ATOMIC-LEVEL MODEL OF THE DYNEIN COILED-COIL STALK       
REMARK 220         WAS CONSTRUCTED BY INITIALLY CONSTRUCTING A 15- HEPTAD       
REMARK 220         COILED COIL REGION USING THE 2.5-HEPTAD OF THE HEPATITIS     
REMARK 220         DELTA ANTIGENOLIGOMERIZATION DOMAIN AS A TEMPLATE (PDB:      
REMARK 220         1A92). AMINO-ACID SEQUENCES OF CC1 AND CC2 FROM MOUSE        
REMARK 220         CYTOPLASMIC DYNEIN WERE THREADED ONTO THE 15- HEPTAD         
REMARK 220         TEMPLATE                                                     
REMARK 225                                                                      
REMARK 225 THEORETICAL MODEL                                                    
REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE.           
REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND                
REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE                   
REMARK 225 RECORDS ARE MEANINGLESS.                                             
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI                             
REMARK 500   CE2  TYR B    54     CD1  ILE B    58              1.86            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991                                
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    TYR B  50   CB  -  CG  -  CD1 ANGL. DEV. =-15.2 DEGREES           
REMARK 500    SER B  78   CA  -  C   -  O   ANGL. DEV. =-15.8 DEGREES           
REMARK 500    THR B  95   CA  -  CB  -  CG2 ANGL. DEV. = 17.8 DEGREES           
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 2BOR   RELATED DB: PDB                                   
REMARK 900  HOMOLOGY-BASED MODEL OF THE DYNEIN COILED-                          
REMARK 900  COIL STALK IN THE 19:19 CONFIGURATION.                              
DBREF  2BOT A   20   119  UNP    Q14204   DYHC_HUMAN    3197   3296             
DBREF  2BOT B    1   100  UNP    Q14204   DYHC_HUMAN    3398   3497             
SEQRES   1 A  100  GLN GLN MET HIS LEU ASN VAL GLY LEU ARG LYS ILE LYS          
SEQRES   2 A  100  GLU THR VAL ASP GLN VAL GLU GLU LEU ARG ARG ASP LEU          
SEQRES   3 A  100  ARG ILE LYS SER GLN GLU LEU GLU VAL LYS ASN ALA ALA          
SEQRES   4 A  100  ALA ASN ASP LYS LEU LYS LYS MET VAL LYS ASP GLN GLN          
SEQRES   5 A  100  GLU ALA GLU LYS LYS LYS VAL MET SER GLN GLU ILE GLN          
SEQRES   6 A  100  GLU GLN LEU HIS LYS GLN GLN GLU VAL ILE ALA ASP LYS          
SEQRES   7 A  100  GLN MET SER VAL LYS GLU ASP LEU ASP LYS VAL GLU PRO          
SEQRES   8 A  100  ALA VAL ILE GLU ALA GLN ASN ALA VAL                          
SEQRES   1 B  100  ALA GLN LEU ASN TYR ALA ASP MET LEU LYS ARG VAL GLU          
SEQRES   2 B  100  PRO LEU ARG ASN GLU LEU GLN LYS LEU GLU ASP ASP ALA          
SEQRES   3 B  100  LYS ASP ASN GLN GLN LYS ALA ASN GLU VAL GLU GLN MET          
SEQRES   4 B  100  ILE ARG ASP LEU GLU ALA SER ILE ALA ARG TYR LYS GLU          
SEQRES   5 B  100  GLU TYR ALA VAL LEU ILE SER GLU ALA GLN ALA ILE LYS          
SEQRES   6 B  100  ALA ASP LEU ALA ALA VAL GLU ALA LYS VAL ASN ARG SER          
SEQRES   7 B  100  THR ALA LEU LEU LYS SER LEU SER ALA GLU ARG GLU ARG          
SEQRES   8 B  100  TRP GLU LYS THR SER GLU THR PHE LYS                          
HELIX    1   1 GLN A   20  VAL A  119  1                                 100    
HELIX    2   2 ALA B    1  LYS B  100  1                                 100    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000