PDB Short entry for 2BV5
HEADER    HYDROLASE                               22-JUN-05   2BV5              
TITLE     CRYSTAL STRUCTURE OF THE HUMAN PROTEIN TYROSINE PHOSPHATASE PTPN5 AT  
TITLE    2 1.8A RESOLUTION                                                      
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE, NON-RECEPTOR TYPE 5;         
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: CATALYTIC DOMAIN, RESIDUES 256-537;                        
COMPND   5 SYNONYM: HUMAN PROTEIN TYROSINE PHOSPHATASE PTPN5;                   
COMPND   6 EC: 3.1.3.48;                                                        
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 ORGAN: BRAIN;                                                        
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_VECTOR: T7;                                        
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PLIC SGC                                  
KEYWDS    PTPN5, STEP, PHOSPHATASE, HYDROLASE                                   
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.E.DEBRECZENI,A.J.BARR,J.ESWARAN,C.SMEE,N.BURGESS,O.GILEADI,F.VON    
AUTHOR   2 DELFT,M.SUNDSTROM,C.ARROWSMITH,A.EDWARDS,S.KNAPP                     
REVDAT  10   13-DEC-23 2BV5    1       REMARK                                   
REVDAT   9   23-OCT-19 2BV5    1       SEQADV                                   
REVDAT   8   08-MAY-19 2BV5    1       REMARK LINK                              
REVDAT   7   28-FEB-18 2BV5    1       SOURCE JRNL                              
REVDAT   6   24-JAN-18 2BV5    1       AUTHOR                                   
REVDAT   5   13-JUL-11 2BV5    1       VERSN                                    
REVDAT   4   02-JUN-09 2BV5    1       AUTHOR                                   
REVDAT   3   24-FEB-09 2BV5    1       VERSN                                    
REVDAT   2   13-MAY-08 2BV5    1       VERSN  AUTHOR JRNL   REMARK              
REVDAT   2 2                   1       FORMUL                                   
REVDAT   1   14-JUL-05 2BV5    0                                                
JRNL        AUTH   J.ESWARAN,J.P.VON KRIES,B.MARSDEN,E.LONGMAN,J.E.DEBRECZENI,  
JRNL        AUTH 2 E.UGOCHUKWU,A.TURNBULL,W.H.LEE,S.KNAPP,A.J.BARR              
JRNL        TITL   CRYSTAL STRUCTURES AND INHIBITOR IDENTIFICATION FOR PTPN5,   
JRNL        TITL 2 PTPRR AND PTPN7: A FAMILY OF HUMAN MAPK-SPECIFIC PROTEIN     
JRNL        TITL 3 TYROSINE PHOSPHATASES.                                       
JRNL        REF    BIOCHEM. J.                   V. 395   483 2006              
JRNL        REFN                   ESSN 1470-8728                               
JRNL        PMID   16441242                                                     
JRNL        DOI    10.1042/BJ20051931                                           
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.2.0005                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 68.04                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 31160                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.166                           
REMARK   3   R VALUE            (WORKING SET) : 0.164                           
REMARK   3   FREE R VALUE                     : 0.201                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1665                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.80                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.85                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 2086                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2370                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 132                          
REMARK   3   BIN FREE R VALUE                    : 0.2610                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2239                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 11                                      
REMARK   3   SOLVENT ATOMS            : 271                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   B VALUE TYPE : LIKELY RESIDUAL                                     
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 17.76                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 0.36000                                              
REMARK   3    B22 (A**2) : -0.41000                                             
REMARK   3    B33 (A**2) : 0.04000                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.107         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.107         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.070         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.362         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.961                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.947                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  2390 ; 0.011 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  2132 ; 0.001 ; 0.020       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  3267 ; 1.322 ; 1.957       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  4967 ; 0.783 ; 3.000       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   300 ; 5.503 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   116 ;34.983 ;23.879       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   390 ;12.096 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    17 ;12.622 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   359 ; 0.079 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  2661 ; 0.005 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):   475 ; 0.001 ; 0.020       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):   500 ; 0.253 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  2261 ; 0.183 ; 0.200       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  1166 ; 0.178 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  1383 ; 0.082 ; 0.200       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   189 ; 0.190 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    15 ; 0.270 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):    58 ; 0.304 ; 0.200       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):    18 ; 0.191 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1510 ; 0.715 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  2368 ; 1.122 ; 2.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1024 ; 1.773 ; 3.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):   889 ; 2.662 ; 4.500       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 1                                          
REMARK   3                                                                      
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   256        A   537                          
REMARK   3    ORIGIN FOR THE GROUP (A):   1.2560  -9.2830 -19.2380              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:  -0.0748 T22:  -0.0394                                     
REMARK   3      T33:  -0.0498 T12:  -0.0029                                     
REMARK   3      T13:   0.0185 T23:   0.0074                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.8479 L22:   1.7696                                     
REMARK   3      L33:   1.0521 L12:  -0.1540                                     
REMARK   3      L13:   0.2624 L23:   0.2367                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0297 S12:  -0.1131 S13:   0.0053                       
REMARK   3      S21:   0.2053 S22:  -0.0333 S23:   0.0769                       
REMARK   3      S31:  -0.0045 S32:  -0.0148 S33:   0.0630                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS.                                                          
REMARK   4                                                                      
REMARK   4 2BV5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUN-05.                  
REMARK 100 THE DEPOSITION ID IS D_1290024606.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 04-MAR-05                          
REMARK 200  TEMPERATURE           (KELVIN) : 100.0                              
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : BESSY                              
REMARK 200  BEAMLINE                       : 14.1                               
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9184                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 32877                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.800                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 39.960                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 2.500                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.7                               
REMARK 200  DATA REDUNDANCY                : 4.900                              
REMARK 200  R MERGE                    (I) : 0.06000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 12.9000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.90                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 95.4                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.50                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.37000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.500                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: PDB ENTRY 2BIJ                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 50.20                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: SITTING DROP, 25% PEG3350, 0.2M          
REMARK 280  LI2SO4, 100MM BIS TRIS PROPANE PH 5.5, VAPOR DIFFUSION, SITTING     
REMARK 280  DROP                                                                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       19.97850            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       68.07450            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       32.00500            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       68.07450            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       19.97850            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       32.00500            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 400                                                                      
REMARK 400 COMPOUND                                                             
REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ALA 257 TO PRO                        
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLU A 264    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 291    CG   CD   CE   NZ                                   
REMARK 470     ASP A 294    CG   OD1  OD2                                       
REMARK 470     LYS A 305    CD   CE   NZ                                        
REMARK 470     ASN A 381    CG   OD1  ND2                                       
REMARK 470     GLU A 382    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 383    CG   CD   CE   NZ                                   
REMARK 470     GLU A 390    CG   CD   OE1  OE2                                  
REMARK 470     GLU A 391    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 419    CG   CD   CE   NZ                                   
REMARK 470     THR A 422    OG1  CG2                                            
REMARK 470     GLU A 424    CD   OE1  OE2                                       
REMARK 470     LYS A 533    CE   NZ                                             
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    HOH A  2198     O    HOH A  2261              1.97            
REMARK 500   N    SER A   256     O    HOH A  2002              2.06            
REMARK 500   O    SER A   319     NH1  ARG A   361              2.09            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    HIS A 471   C     SCY A 472   N       0.228                       
REMARK 500    SCY A 472   C     SER A 473   N       0.152                       
REMARK 500    SCY A 472   C     SER A 473   N      -0.405                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    SCY A 472   O   -  C   -  N   ANGL. DEV. =  11.5 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ILE A 374       75.70   -117.71                                   
REMARK 500    GLU A 391      -61.04   -129.80                                   
REMARK 500    SCY A 472     -111.24   -142.58                                   
REMARK 500    SER A 473      -70.95    -25.00                                   
REMARK 500    ILE A 515       93.79     64.62                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A2105        DISTANCE =  6.30 ANGSTROMS                       
REMARK 525    HOH A2161        DISTANCE =  5.86 ANGSTROMS                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1538                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1539                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 2BIJ   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE HUMAN PROTEIN TYROSINE PHOSPHATASE PTPN5    
REMARK 900 (STEP, STRIATUM ENRICHED ENRICHED PHOSPHATASE)                       
REMARK 900 RELATED ID: 2CJZ   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE C472S MUTANT OF HUMAN PROTEIN TYROSINE      
REMARK 900 PHOSPHATASE PTPN5 (STEP , STRIATUM ENRICHED PHOSPHATASE) IN COMPLEX  
REMARK 900 WITH PHOSPHOTYROSINE                                                 
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999 ASP A 289, LEU A 298, VAL A 299, THR A 517 ARE VARIANT               
REMARK 999 MUTATIONS, SEE ALSO PREVIOUS DEPOSITION 2BIJ                         
DBREF  2BV5 A  256   537  UNP    P54829   PTN5_HUMAN     256    537             
SEQADV 2BV5 PRO A  257  UNP  P54829    ALA   257 ENGINEERED MUTATION            
SEQADV 2BV5 ASP A  289  UNP  P54829    VAL   289 VARIANT                        
SEQADV 2BV5 LEU A  298  UNP  P54829    ARG   298 VARIANT                        
SEQADV 2BV5 VAL A  299  UNP  P54829    CYS   299 VARIANT                        
SEQADV 2BV5 THR A  517  UNP  P54829    HIS   517 VARIANT                        
SEQRES   1 A  282  SER PRO SER ARG VAL LEU GLN ALA GLU GLU LEU HIS GLU          
SEQRES   2 A  282  LYS ALA LEU ASP PRO PHE LEU LEU GLN ALA GLU PHE PHE          
SEQRES   3 A  282  GLU ILE PRO MET ASN PHE VAL ASP PRO LYS GLU TYR ASP          
SEQRES   4 A  282  ILE PRO GLY LEU VAL ARG LYS ASN ARG TYR LYS THR ILE          
SEQRES   5 A  282  LEU PRO ASN PRO HIS SER ARG VAL CYS LEU THR SER PRO          
SEQRES   6 A  282  ASP PRO ASP ASP PRO LEU SER SER TYR ILE ASN ALA ASN          
SEQRES   7 A  282  TYR ILE ARG GLY TYR GLY GLY GLU GLU LYS VAL TYR ILE          
SEQRES   8 A  282  ALA THR GLN GLY PRO ILE VAL SER THR VAL ALA ASP PHE          
SEQRES   9 A  282  TRP ARG MET VAL TRP GLN GLU HIS THR PRO ILE ILE VAL          
SEQRES  10 A  282  MET ILE THR ASN ILE GLU GLU MET ASN GLU LYS CYS THR          
SEQRES  11 A  282  GLU TYR TRP PRO GLU GLU GLN VAL ALA TYR ASP GLY VAL          
SEQRES  12 A  282  GLU ILE THR VAL GLN LYS VAL ILE HIS THR GLU ASP TYR          
SEQRES  13 A  282  ARG LEU ARG LEU ILE SER LEU LYS SER GLY THR GLU GLU          
SEQRES  14 A  282  ARG GLY LEU LYS HIS TYR TRP PHE THR SER TRP PRO ASP          
SEQRES  15 A  282  GLN LYS THR PRO ASP ARG ALA PRO PRO LEU LEU HIS LEU          
SEQRES  16 A  282  VAL ARG GLU VAL GLU GLU ALA ALA GLN GLN GLU GLY PRO          
SEQRES  17 A  282  HIS CYS ALA PRO ILE ILE VAL HIS SCY SER ALA GLY ILE          
SEQRES  18 A  282  GLY ARG THR GLY CYS PHE ILE ALA THR SER ILE CYS CYS          
SEQRES  19 A  282  GLN GLN LEU ARG GLN GLU GLY VAL VAL ASP ILE LEU LYS          
SEQRES  20 A  282  THR THR CYS GLN LEU ARG GLN ASP ARG GLY GLY MET ILE          
SEQRES  21 A  282  GLN THR CYS GLU GLN TYR GLN PHE VAL HIS HIS VAL MET          
SEQRES  22 A  282  SER LEU TYR GLU LYS GLN LEU SER HIS                          
MODRES 2BV5 SCY A  472  CYS  S-ACETYL-CYSTEINE                                  
HET    SCY  A 472      18                                                       
HET    SO4  A1538       5                                                       
HET    GOL  A1539       6                                                       
HETNAM     SCY S-ACETYL-CYSTEINE                                                
HETNAM     SO4 SULFATE ION                                                      
HETNAM     GOL GLYCEROL                                                         
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   1  SCY    C5 H9 N O3 S                                                 
FORMUL   2  SO4    O4 S 2-                                                      
FORMUL   3  GOL    C3 H8 O3                                                     
FORMUL   4  HOH   *271(H2 O)                                                    
HELIX    1   1 GLN A  262  LEU A  271  1                                  10    
HELIX    2   2 ASP A  272  PHE A  281  1                                  10    
HELIX    3   3 ASP A  289  ASP A  294  5                                   6    
HELIX    4   4 GLY A  297  ASN A  302  5                                   6    
HELIX    5   5 ASN A  310  HIS A  312  5                                   3    
HELIX    6   6 GLY A  337  GLU A  341  5                                   5    
HELIX    7   7 ILE A  352  SER A  354  5                                   3    
HELIX    8   8 THR A  355  GLU A  366  1                                  12    
HELIX    9   9 ASN A  376  MET A  380  5                                   5    
HELIX   10  10 THR A  440  ASP A  442  5                                   3    
HELIX   11  11 ARG A  443  GLN A  460  1                                  18    
HELIX   12  12 ILE A  476  GLY A  496  1                                  21    
HELIX   13  13 ASP A  499  ARG A  511  1                                  13    
HELIX   14  14 THR A  517  HIS A  537  1                                  21    
SHEET    1  AA 9 ARG A 314  CYS A 316  0                                        
SHEET    2  AA 9 TYR A 329  ILE A 335 -1  N  ILE A 330   O  VAL A 315           
SHEET    3  AA 9 TYR A 345  THR A 348 -1  O  TYR A 345   N  ILE A 335           
SHEET    4  AA 9 ILE A 468  HIS A 471  1  O  ILE A 468   N  ILE A 346           
SHEET    5  AA 9 ILE A 370  ILE A 374  1  O  ILE A 370   N  ILE A 469           
SHEET    6  AA 9 GLU A 423  PHE A 432  1  O  LYS A 428   N  ILE A 371           
SHEET    7  AA 9 ARG A 412  SER A 420 -1  O  ARG A 412   N  TRP A 431           
SHEET    8  AA 9 VAL A 398  HIS A 407 -1  O  GLU A 399   N  LYS A 419           
SHEET    9  AA 9 GLN A 392  TYR A 395 -1  O  VAL A 393   N  ILE A 400           
LINK         C   HIS A 471                 N  ASCY A 472     1555   1555  1.56  
LINK         C   HIS A 471                 N  BSCY A 472     1555   1555  1.72  
LINK         C  ASCY A 472                 N  ASER A 473     1555   1555  1.49  
CISPEP   1 SER A  319    PRO A  320          0        -1.17                     
SITE     1 AC1  7 TRP A 435  LYS A 439  ARG A 478  GLN A 520                    
SITE     2 AC1  7 HOH A2256  HOH A2270  HOH A2271                               
SITE     1 AC2  5 PHE A 280  PHE A 281  ILE A 283  ARG A 508                    
SITE     2 AC2  5 HOH A2235                                                     
CRYST1   39.957   64.010  136.149  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.025027  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.015623  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.007345        0.00000