PDB Short entry for 2CXJ HEADER METAL BINDING PROTEIN 30-JUN-05 2CXJ TITLE 3D SOLUTION STRUCTURE OF S100A13 COMPND MOL_ID: 1; COMPND 2 MOLECULE: S100 CALCIUM-BINDING PROTEIN A13; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: S100A13; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PLYS KEYWDS S100A13, SOLUTION, FGF, NON-CLASSICAL SECRETION, CALCIUM, METAL KEYWDS 2 BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.VAITHIYALINGAM,T.K.S.KUMAR,C.YU REVDAT 3 09-MAR-22 2CXJ 1 REMARK REVDAT 2 24-FEB-09 2CXJ 1 VERSN REVDAT 1 30-JUN-06 2CXJ 0 JRNL AUTH S.VAITHIYALINGAM,T.K.S.KUMAR,C.YU JRNL TITL THREE-DIMENSIONAL SOLUTION STRUCTURE OF S100A13 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 3.5, CNS 1.1 REMARK 3 AUTHORS : BRUKER (CNS), A.T. BRUNGER (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CXJ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000024737. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 25MM TRIS-HCL, 0.3MM CALCIUM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : PROTEIN (S100A13) REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; 3D_15N- REMARK 210 SEPARATED_NOESY; 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.1, SPARKY 2.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING STANDARD 2D & 3D HOMO- REMARK 210 AND HETERONUCLEAR TECHNIQUES REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 41 H GLN A 45 1.54 REMARK 500 O LEU B 41 H GLN B 45 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 4 -90.14 -73.76 REMARK 500 1 THR A 5 -155.15 -88.19 REMARK 500 1 THR A 19 -88.98 -86.57 REMARK 500 1 ARG A 29 162.00 -42.70 REMARK 500 1 LYS A 30 51.49 -98.36 REMARK 500 1 ASN A 34 -117.43 -117.72 REMARK 500 1 ILE A 35 28.46 -143.15 REMARK 500 1 LEU A 41 -91.35 -76.46 REMARK 500 1 ALA A 42 -37.90 -38.66 REMARK 500 1 LEU A 46 -70.72 -42.93 REMARK 500 1 LEU A 49 -79.91 -82.09 REMARK 500 1 LEU A 50 49.26 -86.18 REMARK 500 1 LYS A 51 152.56 -39.46 REMARK 500 1 VAL A 53 84.38 100.66 REMARK 500 1 THR A 62 -28.77 -38.84 REMARK 500 1 VAL A 65 -77.78 -55.87 REMARK 500 1 ASN A 66 49.35 -82.84 REMARK 500 1 ASP A 68 37.96 -88.47 REMARK 500 1 PHE A 73 -97.79 -97.19 REMARK 500 1 GLU A 75 24.23 -62.60 REMARK 500 1 ARG A 88 -73.19 -43.05 REMARK 500 1 ILE A 95 60.94 -66.09 REMARK 500 1 GLU B 4 -89.34 -73.43 REMARK 500 1 THR B 5 -155.16 -89.06 REMARK 500 1 THR B 19 -90.77 -86.07 REMARK 500 1 ARG B 29 161.84 -41.95 REMARK 500 1 LYS B 30 51.79 -98.35 REMARK 500 1 ASN B 34 -117.90 -115.71 REMARK 500 1 ILE B 35 27.26 -142.27 REMARK 500 1 LEU B 41 -88.01 -81.24 REMARK 500 1 LEU B 46 -72.16 -42.00 REMARK 500 1 HIS B 48 -164.17 -100.72 REMARK 500 1 LEU B 49 -80.31 -82.72 REMARK 500 1 LEU B 50 49.15 -86.88 REMARK 500 1 LYS B 51 157.62 -39.15 REMARK 500 1 VAL B 53 75.98 101.45 REMARK 500 1 VAL B 65 -73.73 -55.24 REMARK 500 1 ASN B 66 35.71 -83.95 REMARK 500 1 ASP B 68 36.74 -87.35 REMARK 500 1 PHE B 73 -94.23 -97.81 REMARK 500 1 GLU B 75 25.75 -63.35 REMARK 500 1 ARG B 88 -73.06 -42.04 REMARK 500 1 ILE B 95 62.92 -64.53 REMARK 500 2 GLU A 4 -87.49 -65.53 REMARK 500 2 THR A 5 -160.32 -78.23 REMARK 500 2 THR A 19 -91.96 -88.00 REMARK 500 2 ARG A 29 165.14 -42.02 REMARK 500 2 ASN A 34 -166.56 -118.64 REMARK 500 2 LEU A 41 -93.62 -73.53 REMARK 500 2 ALA A 42 -34.25 -37.98 REMARK 500 REMARK 500 THIS ENTRY HAS 756 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2CXJ A 1 98 UNP P97352 S10AD_MOUSE 1 98 DBREF 2CXJ B 1 98 UNP P97352 S10AD_MOUSE 1 98 SEQRES 1 A 98 MET ALA ALA GLU THR LEU THR GLU LEU GLU ALA ALA ILE SEQRES 2 A 98 GLU THR VAL VAL SER THR PHE PHE THR PHE ALA GLY ARG SEQRES 3 A 98 GLU GLY ARG LYS GLY SER LEU ASN ILE ASN GLU PHE LYS SEQRES 4 A 98 GLU LEU ALA THR GLN GLN LEU PRO HIS LEU LEU LYS ASP SEQRES 5 A 98 VAL GLY SER LEU ASP GLU LYS MET LYS THR LEU ASP VAL SEQRES 6 A 98 ASN GLN ASP SER GLU LEU ARG PHE SER GLU TYR TRP ARG SEQRES 7 A 98 LEU ILE GLY GLU LEU ALA LYS GLU VAL ARG LYS GLU LYS SEQRES 8 A 98 ALA LEU GLY ILE ARG LYS LYS SEQRES 1 B 98 MET ALA ALA GLU THR LEU THR GLU LEU GLU ALA ALA ILE SEQRES 2 B 98 GLU THR VAL VAL SER THR PHE PHE THR PHE ALA GLY ARG SEQRES 3 B 98 GLU GLY ARG LYS GLY SER LEU ASN ILE ASN GLU PHE LYS SEQRES 4 B 98 GLU LEU ALA THR GLN GLN LEU PRO HIS LEU LEU LYS ASP SEQRES 5 B 98 VAL GLY SER LEU ASP GLU LYS MET LYS THR LEU ASP VAL SEQRES 6 B 98 ASN GLN ASP SER GLU LEU ARG PHE SER GLU TYR TRP ARG SEQRES 7 B 98 LEU ILE GLY GLU LEU ALA LYS GLU VAL ARG LYS GLU LYS SEQRES 8 B 98 ALA LEU GLY ILE ARG LYS LYS HELIX 1 1 LEU A 9 PHE A 20 1 12 HELIX 2 2 PHE A 21 GLU A 27 5 7 HELIX 3 3 ASN A 36 LYS A 39 5 4 HELIX 4 4 GLU A 40 LEU A 46 1 7 HELIX 5 5 SER A 55 ASN A 66 1 12 HELIX 6 6 TYR A 76 GLY A 81 1 6 HELIX 7 7 GLY A 81 GLY A 94 1 14 HELIX 8 8 LEU B 9 THR B 19 1 11 HELIX 9 9 PHE B 20 GLU B 27 5 8 HELIX 10 10 ASN B 36 LYS B 39 5 4 HELIX 11 11 GLU B 40 LEU B 46 1 7 HELIX 12 12 SER B 55 ASN B 66 1 12 HELIX 13 13 TYR B 76 GLY B 81 1 6 HELIX 14 14 GLY B 81 GLY B 94 1 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000