PDB Short entry for 2DHY
HEADER    IMMUNE SYSTEM                           27-MAR-06   2DHY              
TITLE     SOLUTION STRUCTURE OF THE CUE DOMAIN IN THE HUMAN CUE DOMAIN          
TITLE    2 CONTAINING PROTEIN 1 (CUEDC1)                                        
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: CUE DOMAIN-CONTAINING PROTEIN 1;                           
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: CUE DOMAIN;                                                
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: CUEDC1;                                                        
SOURCE   6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS;                              
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: P050905-16;                               
SOURCE   9 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS                           
KEYWDS    CUE DOMAIN CONTAINING PROTEIN 1 (CUEDC1), CUE DOMAIN, STRUCTURAL      
KEYWDS   2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND         
KEYWDS   3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS            
KEYWDS   4 INITIATIVE, RSGI, IMMUNE SYSTEM                                      
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    C.ZHAO,T.KIGAWA,M.SATO,S.KOSHIBA,M.INOUE,S.YOKOYAMA,RIKEN STRUCTURAL  
AUTHOR   2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)                                
REVDAT   3   09-MAR-22 2DHY    1       REMARK SEQADV                            
REVDAT   2   24-FEB-09 2DHY    1       VERSN                                    
REVDAT   1   27-SEP-06 2DHY    0                                                
JRNL        AUTH   C.ZHAO,T.KIGAWA,M.SATO,S.KOSHIBA,M.INOUE,S.YOKOYAMA          
JRNL        TITL   SOLUTION STRUCTURE OF THE CUE DOMAIN IN THE HUMAN CUE DOMAIN 
JRNL        TITL 2 CONTAINING PROTEIN 1 (CUEDC1)                                
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : XWINNMR 2.6, CYANA 1.0.8                             
REMARK   3   AUTHORS     : BRUKER (XWINNMR), GUNTERT, P. (CYANA)                
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2DHY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-MAR-06.                  
REMARK 100 THE DEPOSITION ID IS D_1000025434.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 296.0                              
REMARK 210  PH                             : 7.0                                
REMARK 210  IONIC STRENGTH                 : 120MM                              
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.40MM CUE DOMAIN U-15N, 13C;      
REMARK 210                                   20MM D-TRIS-HCL (PH7.0); 100MM     
REMARK 210                                   NACL; 1MM D-DTT; 0.02% NAN3; 90%   
REMARK 210                                   H2O; 10%D2O                        
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_15N-SEPARATED_NOESY; 3D_13C     
REMARK 210                                   -SEPARATED_NOESY                   
REMARK 210  SPECTROMETER FIELD STRENGTH    : 700 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE 20030801, NMRVIEW 5.0.4,   
REMARK 210                                   KUJIRA 0.9732, CYANA 1.0.8         
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS,            
REMARK 210                                   RESTRAINTED MOLECULAR DYNAMICS     
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : TARGET FUNCTION                    
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    CYS A    39     H    ALA A    43              1.51            
REMARK 500   O    ALA A    47     H    THR A    51              1.53            
REMARK 500   O    VAL A    40     H    ASN A    44              1.54            
REMARK 500   O    PHE A    25     H    PHE A    29              1.60            
REMARK 500   O    ILE A    52     H    LEU A    56              1.60            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 SER A   2       95.45     53.11                                   
REMARK 500  1 VAL A  13      -52.24   -136.86                                   
REMARK 500  1 ARG A  14       46.13     39.72                                   
REMARK 500  1 LEU A  16      165.79     64.09                                   
REMARK 500  1 SER A  45       78.59     81.21                                   
REMARK 500  1 ALA A  47       95.19   -167.48                                   
REMARK 500  1 THR A  51      -29.44    -39.60                                   
REMARK 500  1 ILE A  52      -72.10    -69.20                                   
REMARK 500  1 GLN A  54      -71.29    -55.83                                   
REMARK 500  1 GLU A  61      140.62     69.90                                   
REMARK 500  1 SER A  62      106.18    -39.89                                   
REMARK 500  1 SER A  66      145.59     64.57                                   
REMARK 500  2 SER A   2       88.95     45.60                                   
REMARK 500  2 SER A   3      168.66     56.01                                   
REMARK 500  2 SER A   6      143.25     67.98                                   
REMARK 500  2 ALA A  10       57.65   -163.86                                   
REMARK 500  2 GLN A  12       43.44     39.85                                   
REMARK 500  2 ARG A  15      152.49     79.82                                   
REMARK 500  2 LEU A  16      166.78     69.36                                   
REMARK 500  2 SER A  45       83.27     85.64                                   
REMARK 500  2 ALA A  47       99.21   -160.50                                   
REMARK 500  2 GLN A  54      -71.16    -60.14                                   
REMARK 500  2 GLU A  61       75.01     64.83                                   
REMARK 500  2 SER A  62      -58.71   -166.65                                   
REMARK 500  3 SER A   5      -59.24   -172.19                                   
REMARK 500  3 SER A   6      116.38     61.03                                   
REMARK 500  3 VAL A  13       96.98     55.26                                   
REMARK 500  3 LEU A  16      -71.69   -140.58                                   
REMARK 500  3 SER A  45       86.65     71.23                                   
REMARK 500  3 GLN A  54      -70.22    -53.46                                   
REMARK 500  3 GLU A  61      139.40     65.21                                   
REMARK 500  3 SER A  62       98.01    -69.59                                   
REMARK 500  4 SER A   2      -61.12   -107.23                                   
REMARK 500  4 SER A   3      121.24   -175.94                                   
REMARK 500  4 SER A   5      102.10     59.61                                   
REMARK 500  4 ARG A   8      160.55     58.63                                   
REMARK 500  4 VAL A  13      -46.78   -151.40                                   
REMARK 500  4 LEU A  16      172.29     58.60                                   
REMARK 500  4 PHE A  18       58.11   -113.99                                   
REMARK 500  4 SER A  45       87.50     70.10                                   
REMARK 500  4 ALA A  47       94.07   -167.91                                   
REMARK 500  4 GLN A  54      -70.97    -51.78                                   
REMARK 500  4 GLU A  61       90.25    -65.17                                   
REMARK 500  5 SER A   2      -59.26   -173.14                                   
REMARK 500  5 SER A   3      -57.66   -154.86                                   
REMARK 500  5 ARG A  15      -60.34     69.53                                   
REMARK 500  5 LEU A  16     -177.80     50.24                                   
REMARK 500  5 ALA A  47      100.96   -167.87                                   
REMARK 500  5 THR A  51      -30.05    -39.41                                   
REMARK 500  5 GLN A  54      -71.11    -65.90                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     213 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: HSS001001610.1   RELATED DB: TARGETDB                    
DBREF  2DHY A    8    61  UNP    Q9NWM3   CUED1_HUMAN     37     90             
SEQADV 2DHY GLY A    1  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY SER A    2  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY SER A    3  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY GLY A    4  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY SER A    5  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY SER A    6  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY GLY A    7  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY SER A   62  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY GLY A   63  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY PRO A   64  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY SER A   65  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY SER A   66  UNP  Q9NWM3              CLONING ARTIFACT               
SEQADV 2DHY GLY A   67  UNP  Q9NWM3              CLONING ARTIFACT               
SEQRES   1 A   67  GLY SER SER GLY SER SER GLY ARG PRO ALA ARG GLN VAL          
SEQRES   2 A   67  ARG ARG LEU GLU PHE ASN GLN ALA MET ASP ASP PHE LYS          
SEQRES   3 A   67  THR MET PHE PRO ASN MET ASP TYR ASP ILE ILE GLU CYS          
SEQRES   4 A   67  VAL LEU ARG ALA ASN SER GLY ALA VAL ASP ALA THR ILE          
SEQRES   5 A   67  ASP GLN LEU LEU GLN MET ASN LEU GLU SER GLY PRO SER          
SEQRES   6 A   67  SER GLY                                                      
HELIX    1   1 PHE A   18  PHE A   29  1                                  12    
HELIX    2   2 ASP A   33  SER A   45  1                                  13    
HELIX    3   3 ALA A   47  GLU A   61  1                                  15    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000