PDB Short entry for 2EBZ HEADER SIGNALING PROTEIN 09-FEB-07 2EBZ TITLE SOLUTION STRUCTURE OF THE RGS DOMAIN FROM HUMAN REGULATOR OF G-PROTEIN TITLE 2 SIGNALING 12 (RGS12) COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATOR OF G-PROTEIN SIGNALING 12; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RGS DOMAIN; COMPND 5 SYNONYM: RGS12; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RGS12; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060227-18; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS RGS DOMAIN, REGULATOR OF G-PROTEIN SIGNALING 12, RGS12, STRUCTURAL KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.P.ZHANG,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2EBZ 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EBZ 1 VERSN REVDAT 1 04-MAR-08 2EBZ 0 JRNL AUTH H.P.ZHANG,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RGS DOMAIN FROM HUMAN REGULATOR OF JRNL TITL 2 G-PROTEIN SIGNALING 12 (RGS12) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTENT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EBZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000026480. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.31MM 13C, 15N-LABELED PROTEIN; REMARK 210 20MM D-TRIS-HCL (PH7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02 %NAN3; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.04, REMARK 210 KUJIRA 0.9818, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 52 -39.18 -39.85 REMARK 500 1 PHE A 73 -71.52 -60.00 REMARK 500 1 SER A 74 -7.59 -56.25 REMARK 500 1 ASN A 86 -38.49 -37.92 REMARK 500 1 ALA A 94 -72.02 -36.38 REMARK 500 1 ASP A 95 -31.51 -38.76 REMARK 500 1 ASP A 96 -73.77 -87.53 REMARK 500 1 VAL A 97 -34.60 -39.85 REMARK 500 1 PRO A 101 -174.62 -69.80 REMARK 500 1 LYS A 107 -38.81 -32.34 REMARK 500 1 ASP A 120 -67.13 -98.02 REMARK 500 1 PRO A 145 -169.59 -69.80 REMARK 500 2 GLU A 43 -32.75 -38.28 REMARK 500 2 SER A 74 -5.98 -54.93 REMARK 500 2 ASN A 86 -35.50 -35.65 REMARK 500 2 ASP A 95 -32.79 -36.16 REMARK 500 2 ASP A 96 -75.14 -92.01 REMARK 500 2 VAL A 97 -32.20 -34.65 REMARK 500 2 PRO A 101 -170.93 -69.76 REMARK 500 2 ASP A 120 -69.79 -92.62 REMARK 500 2 GLU A 140 -60.95 -91.22 REMARK 500 2 PRO A 151 -177.57 -69.77 REMARK 500 3 GLU A 43 -33.54 -36.85 REMARK 500 3 PHE A 73 -70.18 -65.67 REMARK 500 3 SER A 74 -8.29 -54.13 REMARK 500 3 ASN A 86 -39.58 -35.53 REMARK 500 3 ASP A 95 -29.98 -36.81 REMARK 500 3 ASP A 96 -72.08 -91.27 REMARK 500 3 PRO A 101 -179.79 -69.76 REMARK 500 3 ASP A 120 -63.42 -95.31 REMARK 500 3 PRO A 145 -175.05 -69.75 REMARK 500 4 SER A 89 -9.04 -59.52 REMARK 500 4 ASP A 95 -29.75 -34.58 REMARK 500 4 ASP A 96 -75.68 -94.62 REMARK 500 4 VAL A 97 -30.89 -37.37 REMARK 500 4 PRO A 101 -171.70 -69.79 REMARK 500 4 PRO A 103 2.28 -69.83 REMARK 500 4 LYS A 107 -37.97 -34.35 REMARK 500 4 ASP A 120 -60.52 -93.69 REMARK 500 4 SER A 121 -64.15 -90.13 REMARK 500 4 PRO A 145 -172.67 -69.77 REMARK 500 5 ALA A 91 21.99 -76.75 REMARK 500 5 GLN A 92 36.21 34.08 REMARK 500 5 ALA A 94 -70.37 -51.71 REMARK 500 5 ASP A 95 -18.77 -41.12 REMARK 500 5 PRO A 101 -179.98 -69.77 REMARK 500 5 LYS A 118 -25.03 -39.65 REMARK 500 5 PRO A 145 -168.44 -69.75 REMARK 500 5 PRO A 154 -177.30 -69.77 REMARK 500 6 GLU A 20 -36.84 -33.58 REMARK 500 REMARK 500 THIS ENTRY HAS 202 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK003002628.1 RELATED DB: TARGETDB DBREF 2EBZ A 8 155 UNP O14924 RGS12_HUMAN 705 852 SEQADV 2EBZ GLY A 1 UNP O14924 EXPRESSION TAG SEQADV 2EBZ SER A 2 UNP O14924 EXPRESSION TAG SEQADV 2EBZ SER A 3 UNP O14924 EXPRESSION TAG SEQADV 2EBZ GLY A 4 UNP O14924 EXPRESSION TAG SEQADV 2EBZ SER A 5 UNP O14924 EXPRESSION TAG SEQADV 2EBZ SER A 6 UNP O14924 EXPRESSION TAG SEQADV 2EBZ GLY A 7 UNP O14924 EXPRESSION TAG SEQRES 1 A 155 GLY SER SER GLY SER SER GLY ARG GLU ARG ARG VAL ALA SEQRES 2 A 155 SER TRP ALA VAL SER PHE GLU ARG LEU LEU GLN ASP PRO SEQRES 3 A 155 VAL GLY VAL ARG TYR PHE SER ASP PHE LEU ARG LYS GLU SEQRES 4 A 155 PHE SER GLU GLU ASN ILE LEU PHE TRP GLN ALA CYS GLU SEQRES 5 A 155 TYR PHE ASN HIS VAL PRO ALA HIS ASP LYS LYS GLU LEU SEQRES 6 A 155 SER TYR ARG ALA ARG GLU ILE PHE SER LYS PHE LEU CYS SEQRES 7 A 155 SER LYS ALA THR THR PRO VAL ASN ILE ASP SER GLN ALA SEQRES 8 A 155 GLN LEU ALA ASP ASP VAL LEU ARG ALA PRO HIS PRO ASP SEQRES 9 A 155 MET PHE LYS GLU GLN GLN LEU GLN ILE PHE ASN LEU MET SEQRES 10 A 155 LYS PHE ASP SER TYR THR ARG PHE LEU LYS SER PRO LEU SEQRES 11 A 155 TYR GLN GLU CYS ILE LEU ALA GLU VAL GLU GLY ARG ALA SEQRES 12 A 155 LEU PRO ASP SER GLN GLN VAL PRO SER SER PRO ALA HELIX 1 1 ALA A 13 SER A 18 1 6 HELIX 2 2 SER A 18 ASP A 25 1 8 HELIX 3 3 ASP A 25 GLU A 39 1 15 HELIX 4 4 SER A 41 VAL A 57 1 17 HELIX 5 5 ASP A 61 LEU A 77 1 17 HELIX 6 6 ASP A 88 ALA A 91 5 4 HELIX 7 7 GLN A 92 ALA A 100 1 9 HELIX 8 8 ASP A 104 ASP A 120 1 17 HELIX 9 9 ASP A 120 SER A 128 1 9 HELIX 10 10 SER A 128 GLY A 141 1 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000