PDB Short entry for 2EPQ
HEADER    TRANSCRIPTION                           30-MAR-07   2EPQ              
TITLE     SOLUTION STRUCTURE OF THE THIRD ZINC FINGER DOMAIN OF ZINC FINGER     
TITLE    2 PROTEIN 278                                                          
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: POZ-, AT HOOK-, AND ZINC FINGER-CONTAINING PROTEIN 1;      
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: ZINC FINGER DOMAIN;                                        
COMPND   5 SYNONYM: ZINC FINGER PROTEIN 278, ZINC FINGER SARCOMA GENE PROTEIN,  
COMPND   6 BTB-POZ DOMAIN ZINC FINGER TRANSCRIPTION FACTOR, PROTEIN KINASE A RI-
COMPND   7 SUBUNIT ALPHA- ASSOCIATED PROTEIN, ZINC FINGER AND BTB DOMAIN-       
COMPND   8 CONTAINING PROTEIN 19;                                               
COMPND   9 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: PATZ1, PATZ, RIAZ, ZBTB19, ZNF278, ZSG;                        
SOURCE   6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   7 EXPRESSION_SYSTEM_PLASMID: P061204-01;                               
SOURCE   8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS                           
KEYWDS    C2H2, ZINC FINGER DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL       
KEYWDS   2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN         
KEYWDS   3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSCRIPTION       
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU,        
AUTHOR   2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)    
REVDAT   3   09-MAR-22 2EPQ    1       REMARK SEQADV LINK                       
REVDAT   2   24-FEB-09 2EPQ    1       VERSN                                    
REVDAT   1   12-FEB-08 2EPQ    0                                                
JRNL        AUTH   W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,          
JRNL        AUTH 2 M.SHIROUZU,S.YOKOYAMA                                        
JRNL        TITL   SOLUTION STRUCTURE OF THE THIRD ZINC FINGER DOMAIN OF ZINC   
JRNL        TITL 2 FINGER PROTEIN 278                                           
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : XWINNMR 3.5, CYANA 2.1                               
REMARK   3   AUTHORS     : BRUKER (XWINNMR), GUNTERT, P. (CYANA)                
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2EPQ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JUN-07.                  
REMARK 100 THE DEPOSITION ID IS D_1000026955.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 7.0                                
REMARK 210  IONIC STRENGTH                 : 120MM                              
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.97MM 13C-15N PROTEIN; 20MM D     
REMARK 210                                   -TRIS-HCL (PH7.0); 100MM NACL;     
REMARK 210                                   1MM D-DTT; 0.02% NAN3; 0.05MM      
REMARK 210                                   ZNCL2, 1MM IDA; 90% H2O, 10% D2O   
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_15N-SEPARATED_NOESY; 3D_13C     
REMARK 210                                   -SEPARATED_NOESY                   
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE 20060702, NMRVIEW 5.0.4,   
REMARK 210                                   KUJIRA 0.9820, CYANA 2.1           
REMARK 210   METHOD USED                   : TORSION ANGLE DYANAMICS,           
REMARK 210                                   SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LEAST          
REMARK 210                                   RESTRAINT VIOLATIONS, STRUCTURES   
REMARK 210                                   WITH THE LOWEST ENERGY, TARGET     
REMARK 210                                   FUNCTION                           
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 SER A 375      -70.14    -60.18                                   
REMARK 500  1 LYS A 381       73.69     59.63                                   
REMARK 500  1 CYS A 385       74.29   -113.66                                   
REMARK 500  1 LEU A 390      108.64   -168.06                                   
REMARK 500  1 VAL A 409      147.36   -172.16                                   
REMARK 500  2 SER A 377       44.44   -103.48                                   
REMARK 500  2 TYR A 383       76.27   -111.42                                   
REMARK 500  2 LEU A 390      106.06   -168.53                                   
REMARK 500  3 LYS A 381       73.74   -154.56                                   
REMARK 500  3 CYS A 385       74.75   -113.51                                   
REMARK 500  3 LEU A 390      109.81   -167.72                                   
REMARK 500  4 CYS A 385       74.70   -113.87                                   
REMARK 500  4 LEU A 390      105.70   -168.73                                   
REMARK 500  4 SER A 408       72.54   -116.74                                   
REMARK 500  5 SER A 377       66.31   -114.50                                   
REMARK 500  5 LYS A 381       74.03   -160.70                                   
REMARK 500  5 CYS A 385       75.05   -113.48                                   
REMARK 500  5 LEU A 390      112.42   -169.03                                   
REMARK 500  5 LYS A 411       99.13    -59.69                                   
REMARK 500  5 PRO A 414       93.79    -69.76                                   
REMARK 500  6 TYR A 383       68.33   -112.46                                   
REMARK 500  6 LEU A 390      106.33   -168.98                                   
REMARK 500  7 SER A 375      -68.70   -131.78                                   
REMARK 500  7 LYS A 381       73.71     56.79                                   
REMARK 500  7 CYS A 385       74.65   -113.54                                   
REMARK 500  7 LEU A 390      112.97   -168.61                                   
REMARK 500  7 HIS A 405       46.68    -91.24                                   
REMARK 500  8 CYS A 385       74.94   -117.44                                   
REMARK 500  8 LEU A 390      104.11   -168.01                                   
REMARK 500  8 SER A 412      -60.22   -103.99                                   
REMARK 500  8 PRO A 414     -175.32    -69.79                                   
REMARK 500  9 LYS A 381       73.57   -168.46                                   
REMARK 500  9 CYS A 385       75.25   -113.37                                   
REMARK 500  9 LEU A 390      110.88   -168.43                                   
REMARK 500 10 LEU A 390      108.40   -165.81                                   
REMARK 500 11 SER A 378       68.29   -100.40                                   
REMARK 500 11 TYR A 383       77.02   -101.59                                   
REMARK 500 11 CYS A 385       75.87   -113.36                                   
REMARK 500 11 LEU A 390      106.69   -167.57                                   
REMARK 500 11 SER A 415       62.36   -102.11                                   
REMARK 500 12 CYS A 385       74.23   -114.75                                   
REMARK 500 12 LEU A 390      110.30   -166.68                                   
REMARK 500 13 SER A 378      -65.29    -97.66                                   
REMARK 500 13 CYS A 385       74.16   -113.66                                   
REMARK 500 13 LEU A 390      104.71   -167.23                                   
REMARK 500 14 CYS A 385       74.25   -115.17                                   
REMARK 500 14 LEU A 390      113.36   -166.83                                   
REMARK 500 14 PRO A 414       91.82    -69.75                                   
REMARK 500 15 CYS A 385       74.37   -113.63                                   
REMARK 500 15 LEU A 390      109.51   -166.58                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      68 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 201  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 385   SG                                                     
REMARK 620 2 CYS A 388   SG  108.3                                              
REMARK 620 3 HIS A 401   NE2 112.4 119.0                                        
REMARK 620 4 HIS A 405   NE2  99.3 101.8 113.8                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201                  
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: HSI002013231.2   RELATED DB: TARGETDB                    
DBREF  2EPQ A  380   411  UNP    Q9HBE1   PATZ1_HUMAN    380    411             
SEQADV 2EPQ GLY A  373  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ SER A  374  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ SER A  375  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ GLY A  376  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ SER A  377  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ SER A  378  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ GLY A  379  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ SER A  412  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ GLY A  413  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ PRO A  414  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ SER A  415  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ SER A  416  UNP  Q9HBE1              EXPRESSION TAG                 
SEQADV 2EPQ GLY A  417  UNP  Q9HBE1              EXPRESSION TAG                 
SEQRES   1 A   45  GLY SER SER GLY SER SER GLY GLU LYS PRO TYR SER CYS          
SEQRES   2 A   45  PRO VAL CYS GLY LEU ARG PHE LYS ARG LYS ASP ARG MET          
SEQRES   3 A   45  SER TYR HIS VAL ARG SER HIS ASP GLY SER VAL GLY LYS          
SEQRES   4 A   45  SER GLY PRO SER SER GLY                                      
HET     ZN  A 201       1                                                       
HETNAM      ZN ZINC ION                                                         
FORMUL   2   ZN    ZN 2+                                                        
HELIX    1   1 ARG A  394  ASP A  406  1                                  13    
SHEET    1   A 2 SER A 384  CYS A 385  0                                        
SHEET    2   A 2 LEU A 390  ARG A 391 -1  O  LEU A 390   N  CYS A 385           
LINK        ZN    ZN A 201                 SG  CYS A 385     1555   1555  2.27  
LINK        ZN    ZN A 201                 SG  CYS A 388     1555   1555  2.19  
LINK        ZN    ZN A 201                 NE2 HIS A 401     1555   1555  2.10  
LINK        ZN    ZN A 201                 NE2 HIS A 405     1555   1555  2.09  
SITE     1 AC1  4 CYS A 385  CYS A 388  HIS A 401  HIS A 405                    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000