PDB Short entry for 2EQG
HEADER    HYDROLASE                               30-MAR-07   2EQG              
TITLE     SOLUTION STRUCTURE OF THE FIRST A20-TYPE ZINC FINGER DOMAIN           
TITLE    2 FROM HUMAN TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN3             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN 3;            
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: A20-TYPE ZINC FINGER DOMAIN;                               
COMPND   5 SYNONYM: PUTATIVE DNA-BINDING PROTEIN A20, ZINC FINGER               
COMPND   6 PROTEIN A20;                                                         
COMPND   7 EC: 3.-.-.-;                                                         
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: TNFAIP3;                                                       
SOURCE   6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   7 EXPRESSION_SYSTEM_PLASMID: P070115-04;                               
SOURCE   8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS                           
KEYWDS    ZF-A20 DOMAIN, TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN           
KEYWDS   2 3, PUTATIVE DNA-BINDING PROTEIN A20, ZINC FINGER PROTEIN             
KEYWDS   3 A20, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON                
KEYWDS   4 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN                    
KEYWDS   5 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, HYDROLASE           
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    H.P.ZHANG,F.HAYAHSI,S.YOKOYAMA,RIKEN STRUCTURAL                       
AUTHOR   2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)                                
REVDAT   2   24-FEB-09 2EQG    1       VERSN                                    
REVDAT   1   02-OCT-07 2EQG    0                                                
JRNL        AUTH   H.P.ZHANG,F.HAYASHI,S.YOKOYAMA                               
JRNL        TITL   SOLUTION STRUCTURE OF THE FIRST A20-TYPE ZINC                
JRNL        TITL 2 FINGER DOMAIN FROM HUMAN TUMOR NECROSIS FACTOR,              
JRNL        TITL 3 ALPHA-INDUCED PROTEIN3                                       
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   1                                                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CYANA 2.0.17                                         
REMARK   3   AUTHORS     : GUNTERT, P.                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2EQG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUN-07.                  
REMARK 100 THE RCSB ID CODE IS RCSB026981.                                      
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 7.0                                
REMARK 210  IONIC STRENGTH                 : 120MM                              
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.08MM 13C, 15N-LABELED            
REMARK 210                                   PROTEIN; 20MM D-TRIS-HCL(PH        
REMARK 210                                   7.0); 100MM NACL; 1MM D-DTT;       
REMARK 210                                   0.02% NAN3; 0.05MM ZNCL2+1MM       
REMARK 210                                   IDA; 90% H2O, 10% D2O              
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_13C-SEPARATED_NOESY, 3D_        
REMARK 210                                   15N-SEPARATED_NOESY                
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ                            
REMARK 210  SPECTROMETER MODEL             : INOVA                              
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : VNMR 6.1C, NMRPIPE 20031121,       
REMARK 210                                   NMRVIEW 5.0.4, KUJIRA 0.9818,      
REMARK 210                                   CYANA 2.0.17                       
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LEAST          
REMARK 210                                   RESTRAINT VIOLATIONS,              
REMARK 210                                   STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY, TARGET FUNCTION            
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  2 LEU A   9      107.24    -54.78                                   
REMARK 500  2 PRO A  17        0.21    -69.75                                   
REMARK 500  3 PRO A  17        3.15    -69.78                                   
REMARK 500  4 PRO A  17        0.75    -69.83                                   
REMARK 500  5 PRO A  46       86.70    -69.76                                   
REMARK 500  6 PRO A  17        0.22    -69.77                                   
REMARK 500  7 LEU A   9      105.00    -56.07                                   
REMARK 500  7 PRO A  17        0.41    -69.73                                   
REMARK 500  7 SER A  35      -37.09    -39.48                                   
REMARK 500  7 PRO A  46       99.52    -69.77                                   
REMARK 500  8 PRO A  17        1.35    -69.79                                   
REMARK 500  8 PRO A  20        0.85    -69.66                                   
REMARK 500  9 SER A   3      175.46    -58.26                                   
REMARK 500  9 PRO A  46       88.51    -69.78                                   
REMARK 500 10 LEU A   9      109.78    -58.24                                   
REMARK 500 10 PRO A  20        2.96    -69.78                                   
REMARK 500 10 PRO A  46       98.99    -69.74                                   
REMARK 500 11 LEU A   9      104.96    -54.83                                   
REMARK 500 11 PRO A  17        0.19    -69.79                                   
REMARK 500 12 LEU A   9      107.99    -55.98                                   
REMARK 500 13 GLU A  33      -31.89    -39.12                                   
REMARK 500 13 SER A  35      -33.55    -35.10                                   
REMARK 500 14 SER A  35      -37.43    -32.05                                   
REMARK 500 14 PRO A  46        3.10    -69.76                                   
REMARK 500 15 PRO A  17        0.89    -69.83                                   
REMARK 500 16 LEU A   9      104.31    -57.13                                   
REMARK 500 16 PRO A  17        1.32    -69.75                                   
REMARK 500 16 PRO A  46        2.56    -69.76                                   
REMARK 500 17 LYS A  40      -32.37    -37.51                                   
REMARK 500 17 PRO A  46       84.33    -69.74                                   
REMARK 500 18 PRO A  46       96.13    -69.80                                   
REMARK 500 20 PRO A  17        1.24    -69.76                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620  (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;              
REMARK 620  SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                            
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                           1  ZN A 201  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A  14   SG                                                     
REMARK 620 2 CYS A  19   SG  110.4                                              
REMARK 620 3 CYS A  31   SG  112.8 105.1                                        
REMARK 620 4 CYS A  34   SG  105.5 107.1 115.9                                  
REMARK 620 N                    1     2     3                                   
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: HSK003100168.1   RELATED DB: TARGETDB                    
DBREF  2EQG A    8    43  UNP    P21580   TNAP3_HUMAN    381    416             
SEQADV 2EQG GLY A    1  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG SER A    2  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG SER A    3  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG GLY A    4  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG SER A    5  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG SER A    6  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG GLY A    7  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG SER A   44  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG GLY A   45  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG PRO A   46  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG SER A   47  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG SER A   48  UNP  P21580              EXPRESSION TAG                 
SEQADV 2EQG GLY A   49  UNP  P21580              EXPRESSION TAG                 
SEQRES   1 A   49  GLY SER SER GLY SER SER GLY SER LEU MET ASP VAL LYS          
SEQRES   2 A   49  CYS GLU THR PRO ASN CYS PRO PHE PHE MET SER VAL ASN          
SEQRES   3 A   49  THR GLN PRO LEU CYS HIS GLU CYS SER GLU ARG ARG GLN          
SEQRES   4 A   49  LYS ASN GLN ASN SER GLY PRO SER SER GLY                      
HET     ZN  A 201       1                                                       
HETNAM      ZN ZINC ION                                                         
FORMUL   2   ZN    ZN 2+                                                        
HELIX    1   1 CYS A   31  LYS A   40  1                                  10    
LINK         SG  CYS A  14                ZN    ZN A 201     1555   1555  2.34  
LINK         SG  CYS A  19                ZN    ZN A 201     1555   1555  2.34  
LINK         SG  CYS A  31                ZN    ZN A 201     1555   1555  2.25  
LINK         SG  CYS A  34                ZN    ZN A 201     1555   1555  2.28  
CISPEP   1 GLN A   28    PRO A   29          1        -0.02                     
CISPEP   2 GLN A   28    PRO A   29          2         0.01                     
CISPEP   3 GLN A   28    PRO A   29          3        -0.01                     
CISPEP   4 GLN A   28    PRO A   29          4        -0.08                     
CISPEP   5 GLN A   28    PRO A   29          5         0.00                     
CISPEP   6 GLN A   28    PRO A   29          6         0.03                     
CISPEP   7 GLN A   28    PRO A   29          7         0.02                     
CISPEP   8 GLN A   28    PRO A   29          8         0.04                     
CISPEP   9 GLN A   28    PRO A   29          9         0.12                     
CISPEP  10 GLN A   28    PRO A   29         10        -0.04                     
CISPEP  11 GLN A   28    PRO A   29         11        -0.04                     
CISPEP  12 GLN A   28    PRO A   29         12        -0.05                     
CISPEP  13 GLN A   28    PRO A   29         13        -0.01                     
CISPEP  14 GLN A   28    PRO A   29         14        -0.05                     
CISPEP  15 GLN A   28    PRO A   29         15         0.05                     
CISPEP  16 GLN A   28    PRO A   29         16         0.04                     
CISPEP  17 GLN A   28    PRO A   29         17        -0.03                     
CISPEP  18 GLN A   28    PRO A   29         18         0.03                     
CISPEP  19 GLN A   28    PRO A   29         19        -0.06                     
CISPEP  20 GLN A   28    PRO A   29         20        -0.02                     
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000