PDB Short entry for 2FS4 HEADER HYDROLASE 20-JAN-06 2FS4 TITLE KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THE C RING COMPND MOL_ID: 1; COMPND 2 MOLECULE: RENIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ANGIOTENSINOGENASE; COMPND 5 EC: 3.4.23.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: REN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-LIGAND COMPLEXES, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.D.HOLSWORTH,C.CAI,X.-M.CHENG,W.L.CODY,D.M.DOWNING,N.ERASGA,C.LEE, AUTHOR 2 N.A.POWELL,J.J.EDMUNDS,M.STIER,M.JALAIE,E.ZHANG,P.MCCONNELL, AUTHOR 3 M.J.RYAN,J.BRYANT,T.LI,A.KASANI,E.HALL,R.SUBEDI,M.RAHIM,S.MAITI REVDAT 3 29-FEB-12 2FS4 1 VERSN REVDAT 2 24-FEB-09 2FS4 1 VERSN REVDAT 1 13-JUN-06 2FS4 0 JRNL AUTH D.D.HOLSWORTH,C.CAI,X.M.CHENG,W.L.CODY,D.M.DOWNING,N.ERASGA, JRNL AUTH 2 C.LEE,N.A.POWELL,J.J.EDNUNDS,M.STIER,M.JALAIE,E.ZHANG, JRNL AUTH 3 P.MCCONNELL,M.J.RYAN,J.BRYANT,T.LI,A.KASANI,E.HALL,R.SUBEDI, JRNL AUTH 4 M.RAHIM,S.MAITI JRNL TITL KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THE JRNL TITL 2 "C" RING JRNL REF BIOORG.MED.CHEM.LETT. V. 16 2500 2006 JRNL REFN ISSN 0960-894X JRNL PMID 16480874 JRNL DOI 10.1016/J.BMCL.2006.01.084 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 47471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4455 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5077 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 172 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FS4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-06. REMARK 100 THE RCSB ID CODE IS RCSB036244. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47471 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 1.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 70.95850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.95850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.95850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.95850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 70.95850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 70.95850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 70.95850 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 70.95850 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 70.95850 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 70.95850 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 70.95850 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 70.95850 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 70.95850 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 70.95850 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 70.95850 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 70.95850 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 70.95850 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 70.95850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 74000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 141.91700 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -70.95850 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 70.95850 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 70.95850 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 70.95850 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 141.91700 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 141.91700 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -70.95850 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 70.95850 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 70.95850 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 70.95850 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 141.91700 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 141.91700 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -70.95850 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 70.95850 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 70.95850 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 70.95850 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 141.91700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 162A REMARK 465 SER A 162B REMARK 465 GLN A 162C REMARK 465 SER A 162D REMARK 465 ASN B 162A REMARK 465 SER B 162B REMARK 465 GLN B 162C REMARK 465 SER B 162D REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 162 CG CD OE1 OE2 REMARK 470 GLU B 162 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 11 22.10 48.02 REMARK 500 ARG A 48 2.42 -69.11 REMARK 500 ASN A 70 -61.60 -141.60 REMARK 500 SER A 161 -143.50 44.01 REMARK 500 SER A 206 95.49 166.56 REMARK 500 ALA A 292 30.01 -81.52 REMARK 500 ALA B 52 0.39 -67.76 REMARK 500 LEU B 76 114.50 -167.27 REMARK 500 TYR B 78 174.81 -54.34 REMARK 500 SER B 79 -163.32 -57.08 REMARK 500 THR B 80 -119.81 38.05 REMARK 500 SER B 205 -11.42 -172.25 REMARK 500 THR B 207 75.59 -66.88 REMARK 500 ASP B 212 9.44 85.13 REMARK 500 ARG B 244 -96.92 -68.29 REMARK 500 ALA B 292 32.26 -96.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 432 DISTANCE = 6.50 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PZ1 B 805 DBREF 2FS4 A 3 333 UNP P00797 RENI_HUMAN 74 406 DBREF 2FS4 B 3 333 UNP P00797 RENI_HUMAN 74 406 SEQRES 1 A 333 SER SER VAL ILE LEU THR ASN TYR MET ASP THR GLN TYR SEQRES 2 A 333 TYR GLY GLU ILE GLY ILE GLY THR PRO PRO GLN THR PHE SEQRES 3 A 333 LYS VAL VAL PHE ASP THR GLY SER SER ASN VAL TRP VAL SEQRES 4 A 333 PRO SER SER LYS CYS SER ARG LEU TYR THR ALA CYS VAL SEQRES 5 A 333 TYR HIS LYS LEU PHE ASP ALA SER ASP SER SER SER TYR SEQRES 6 A 333 LYS HIS ASN GLY THR GLU LEU THR LEU ARG TYR SER THR SEQRES 7 A 333 GLY THR VAL SER GLY PHE LEU SER GLN ASP ILE ILE THR SEQRES 8 A 333 VAL GLY GLY ILE THR VAL THR GLN MET PHE GLY GLU VAL SEQRES 9 A 333 THR GLU MET PRO ALA LEU PRO PHE MET LEU ALA GLU PHE SEQRES 10 A 333 ASP GLY VAL VAL GLY MET GLY PHE ILE GLU GLN ALA ILE SEQRES 11 A 333 GLY ARG VAL THR PRO ILE PHE ASP ASN ILE ILE SER GLN SEQRES 12 A 333 GLY VAL LEU LYS GLU ASP VAL PHE SER PHE TYR TYR ASN SEQRES 13 A 333 ARG ASP SER GLU ASN SER GLN SER LEU GLY GLY GLN ILE SEQRES 14 A 333 VAL LEU GLY GLY SER ASP PRO GLN HIS TYR GLU GLY ASN SEQRES 15 A 333 PHE HIS TYR ILE ASN LEU ILE LYS THR GLY VAL TRP GLN SEQRES 16 A 333 ILE GLN MET LYS GLY VAL SER VAL GLY SER SER THR LEU SEQRES 17 A 333 LEU CYS GLU ASP GLY CYS LEU ALA LEU VAL ASP THR GLY SEQRES 18 A 333 ALA SER TYR ILE SER GLY SER THR SER SER ILE GLU LYS SEQRES 19 A 333 LEU MET GLU ALA LEU GLY ALA LYS LYS ARG LEU PHE ASP SEQRES 20 A 333 TYR VAL VAL LYS CYS ASN GLU GLY PRO THR LEU PRO ASP SEQRES 21 A 333 ILE SER PHE HIS LEU GLY GLY LYS GLU TYR THR LEU THR SEQRES 22 A 333 SER ALA ASP TYR VAL PHE GLN GLU SER TYR SER SER LYS SEQRES 23 A 333 LYS LEU CYS THR LEU ALA ILE HIS ALA MET ASP ILE PRO SEQRES 24 A 333 PRO PRO THR GLY PRO THR TRP ALA LEU GLY ALA THR PHE SEQRES 25 A 333 ILE ARG LYS PHE TYR THR GLU PHE ASP ARG ARG ASN ASN SEQRES 26 A 333 ARG ILE GLY PHE ALA LEU ALA ARG SEQRES 1 B 333 SER SER VAL ILE LEU THR ASN TYR MET ASP THR GLN TYR SEQRES 2 B 333 TYR GLY GLU ILE GLY ILE GLY THR PRO PRO GLN THR PHE SEQRES 3 B 333 LYS VAL VAL PHE ASP THR GLY SER SER ASN VAL TRP VAL SEQRES 4 B 333 PRO SER SER LYS CYS SER ARG LEU TYR THR ALA CYS VAL SEQRES 5 B 333 TYR HIS LYS LEU PHE ASP ALA SER ASP SER SER SER TYR SEQRES 6 B 333 LYS HIS ASN GLY THR GLU LEU THR LEU ARG TYR SER THR SEQRES 7 B 333 GLY THR VAL SER GLY PHE LEU SER GLN ASP ILE ILE THR SEQRES 8 B 333 VAL GLY GLY ILE THR VAL THR GLN MET PHE GLY GLU VAL SEQRES 9 B 333 THR GLU MET PRO ALA LEU PRO PHE MET LEU ALA GLU PHE SEQRES 10 B 333 ASP GLY VAL VAL GLY MET GLY PHE ILE GLU GLN ALA ILE SEQRES 11 B 333 GLY ARG VAL THR PRO ILE PHE ASP ASN ILE ILE SER GLN SEQRES 12 B 333 GLY VAL LEU LYS GLU ASP VAL PHE SER PHE TYR TYR ASN SEQRES 13 B 333 ARG ASP SER GLU ASN SER GLN SER LEU GLY GLY GLN ILE SEQRES 14 B 333 VAL LEU GLY GLY SER ASP PRO GLN HIS TYR GLU GLY ASN SEQRES 15 B 333 PHE HIS TYR ILE ASN LEU ILE LYS THR GLY VAL TRP GLN SEQRES 16 B 333 ILE GLN MET LYS GLY VAL SER VAL GLY SER SER THR LEU SEQRES 17 B 333 LEU CYS GLU ASP GLY CYS LEU ALA LEU VAL ASP THR GLY SEQRES 18 B 333 ALA SER TYR ILE SER GLY SER THR SER SER ILE GLU LYS SEQRES 19 B 333 LEU MET GLU ALA LEU GLY ALA LYS LYS ARG LEU PHE ASP SEQRES 20 B 333 TYR VAL VAL LYS CYS ASN GLU GLY PRO THR LEU PRO ASP SEQRES 21 B 333 ILE SER PHE HIS LEU GLY GLY LYS GLU TYR THR LEU THR SEQRES 22 B 333 SER ALA ASP TYR VAL PHE GLN GLU SER TYR SER SER LYS SEQRES 23 B 333 LYS LEU CYS THR LEU ALA ILE HIS ALA MET ASP ILE PRO SEQRES 24 B 333 PRO PRO THR GLY PRO THR TRP ALA LEU GLY ALA THR PHE SEQRES 25 B 333 ILE ARG LYS PHE TYR THR GLU PHE ASP ARG ARG ASN ASN SEQRES 26 B 333 ARG ILE GLY PHE ALA LEU ALA ARG HET PZ1 B 805 43 HETNAM PZ1 (6R)-6-({[1-(3-HYDROXYPROPYL)-1,7-DIHYDROQUINOLIN-7- HETNAM 2 PZ1 YL]OXY}METHYL)-1-(4-{3-[(2-METHOXYBENZYL) HETNAM 3 PZ1 OXY]PROPOXY}PHENYL)PIPERAZIN-2-ONE FORMUL 3 PZ1 C34 H41 N3 O6 FORMUL 4 HOH *172(H2 O) HELIX 1 1 TYR A 50 TYR A 55 1 6 HELIX 2 2 ASP A 60 SER A 64 5 5 HELIX 3 3 PRO A 110 MET A 115 1 6 HELIX 4 4 PHE A 127 VAL A 135 5 9 HELIX 5 5 PRO A 137 SER A 144 1 8 HELIX 6 6 ASP A 175 GLN A 177 5 3 HELIX 7 7 SER A 228 GLY A 240 1 13 HELIX 8 8 ASN A 253 GLY A 255 5 3 HELIX 9 9 THR A 273 VAL A 278 1 6 HELIX 10 10 GLY A 309 ARG A 314 1 6 HELIX 11 11 TYR B 50 VAL B 54 5 5 HELIX 12 12 ASP B 60 SER B 64 5 5 HELIX 13 13 PRO B 113 ALA B 117 5 5 HELIX 14 14 PHE B 127 VAL B 135 5 9 HELIX 15 15 PRO B 137 GLN B 145 1 9 HELIX 16 16 ASP B 175 GLN B 177 5 3 HELIX 17 17 SER B 228 GLY B 240 1 13 HELIX 18 18 GLU B 254 LEU B 258 5 5 HELIX 19 19 THR B 273 TYR B 277 1 5 HELIX 20 20 GLY B 309 LYS B 315 1 7 SHEET 1 A 9 LYS A 68 ARG A 77 0 SHEET 2 A 9 THR A 82 VAL A 94 -1 O VAL A 83 N LEU A 76 SHEET 3 A 9 GLN A 14 ILE A 21 -1 N GLY A 20 O THR A 93 SHEET 4 A 9 SER A 4 TYR A 10 -1 N THR A 8 O TYR A 16 SHEET 5 A 9 GLY A 167 LEU A 171 -1 O ILE A 169 N VAL A 5 SHEET 6 A 9 VAL A 152 TYR A 157 -1 N TYR A 156 O GLN A 168 SHEET 7 A 9 PHE A 316 ASP A 321 -1 O PHE A 320 N PHE A 153 SHEET 8 A 9 ARG A 326 ALA A 332 -1 O GLY A 328 N GLU A 319 SHEET 9 A 9 TYR A 179 ASN A 187 -1 N ILE A 186 O ILE A 327 SHEET 1 B13 LYS A 68 ARG A 77 0 SHEET 2 B13 THR A 82 VAL A 94 -1 O VAL A 83 N LEU A 76 SHEET 3 B13 ILE A 97 GLU A 108 -1 O GLU A 105 N PHE A 86 SHEET 4 B13 VAL A 39 PRO A 42 1 N VAL A 39 O GLY A 104 SHEET 5 B13 GLY A 121 GLY A 124 -1 O VAL A 122 N TRP A 40 SHEET 6 B13 GLN A 26 ASP A 33 1 N VAL A 31 O VAL A 123 SHEET 7 B13 GLN A 14 ILE A 21 -1 N GLY A 17 O VAL A 30 SHEET 8 B13 SER A 4 TYR A 10 -1 N THR A 8 O TYR A 16 SHEET 9 B13 GLY A 167 LEU A 171 -1 O ILE A 169 N VAL A 5 SHEET 10 B13 VAL A 152 TYR A 157 -1 N TYR A 156 O GLN A 168 SHEET 11 B13 PHE A 316 ASP A 321 -1 O PHE A 320 N PHE A 153 SHEET 12 B13 ARG A 326 ALA A 332 -1 O GLY A 328 N GLU A 319 SHEET 13 B13 TYR A 179 ASN A 187 -1 N ILE A 186 O ILE A 327 SHEET 1 C 5 GLN A 195 MET A 198 0 SHEET 2 C 5 CYS A 214 VAL A 218 -1 O ALA A 216 N ILE A 196 SHEET 3 C 5 TRP A 306 LEU A 308 1 O LEU A 308 N LEU A 217 SHEET 4 C 5 ILE A 225 GLY A 227 -1 N SER A 226 O ALA A 307 SHEET 5 C 5 ILE A 293 ALA A 295 1 O HIS A 294 N ILE A 225 SHEET 1 D 3 GLY A 200 VAL A 203 0 SHEET 2 D 3 ILE A 261 LEU A 265 -1 O SER A 262 N SER A 202 SHEET 3 D 3 LYS A 268 LEU A 272 -1 O LEU A 272 N ILE A 261 SHEET 1 E 3 LYS A 242 LYS A 243 0 SHEET 2 E 3 TYR A 248 LYS A 251 -1 O VAL A 249 N LYS A 242 SHEET 3 E 3 LEU A 288 THR A 290 -1 O CYS A 289 N VAL A 250 SHEET 1 F 9 GLU B 73 LEU B 76 0 SHEET 2 F 9 VAL B 83 VAL B 94 -1 O GLY B 85 N LEU B 74 SHEET 3 F 9 GLN B 14 ILE B 21 -1 N GLY B 20 O THR B 93 SHEET 4 F 9 SER B 4 TYR B 10 -1 N THR B 8 O TYR B 16 SHEET 5 F 9 GLY B 167 LEU B 171 -1 O GLY B 167 N LEU B 7 SHEET 6 F 9 VAL B 152 TYR B 157 -1 N SER B 154 O VAL B 170 SHEET 7 F 9 PHE B 316 ASP B 321 -1 O PHE B 320 N PHE B 153 SHEET 8 F 9 ARG B 326 ALA B 332 -1 O GLY B 328 N GLU B 319 SHEET 9 F 9 TYR B 179 ASN B 187 -1 N GLU B 180 O LEU B 331 SHEET 1 G13 GLU B 73 LEU B 76 0 SHEET 2 G13 VAL B 83 VAL B 94 -1 O GLY B 85 N LEU B 74 SHEET 3 G13 ILE B 97 GLU B 108 -1 O PHE B 103 N SER B 88 SHEET 4 G13 VAL B 39 PRO B 42 1 N VAL B 41 O VAL B 106 SHEET 5 G13 GLY B 121 GLY B 124 -1 O VAL B 122 N TRP B 40 SHEET 6 G13 GLN B 26 ASP B 33 1 N VAL B 31 O VAL B 123 SHEET 7 G13 GLN B 14 ILE B 21 -1 N GLY B 17 O VAL B 30 SHEET 8 G13 SER B 4 TYR B 10 -1 N THR B 8 O TYR B 16 SHEET 9 G13 GLY B 167 LEU B 171 -1 O GLY B 167 N LEU B 7 SHEET 10 G13 VAL B 152 TYR B 157 -1 N SER B 154 O VAL B 170 SHEET 11 G13 PHE B 316 ASP B 321 -1 O PHE B 320 N PHE B 153 SHEET 12 G13 ARG B 326 ALA B 332 -1 O GLY B 328 N GLU B 319 SHEET 13 G13 TYR B 179 ASN B 187 -1 N GLU B 180 O LEU B 331 SHEET 1 H 4 SER B 206 LEU B 209 0 SHEET 2 H 4 GLN B 195 VAL B 203 -1 N VAL B 201 O LEU B 209 SHEET 3 H 4 ILE B 261 LEU B 265 -1 O SER B 262 N SER B 202 SHEET 4 H 4 LYS B 268 LEU B 272 -1 O TYR B 270 N PHE B 263 SHEET 1 I 6 SER B 206 LEU B 209 0 SHEET 2 I 6 GLN B 195 VAL B 203 -1 N VAL B 201 O LEU B 209 SHEET 3 I 6 CYS B 214 VAL B 218 -1 O ALA B 216 N ILE B 196 SHEET 4 I 6 TRP B 306 LEU B 308 1 O LEU B 308 N LEU B 217 SHEET 5 I 6 ILE B 225 GLY B 227 -1 N SER B 226 O ALA B 307 SHEET 6 I 6 ILE B 293 ALA B 295 1 O HIS B 294 N ILE B 225 SHEET 1 J 4 LYS B 242 LYS B 243 0 SHEET 2 J 4 TYR B 248 LYS B 251 -1 O VAL B 249 N LYS B 242 SHEET 3 J 4 LEU B 288 LEU B 291 -1 O CYS B 289 N VAL B 250 SHEET 4 J 4 VAL B 278 PHE B 279 -1 N PHE B 279 O THR B 290 SSBOND 1 CYS A 46 CYS A 53 1555 1555 2.04 SSBOND 2 CYS A 210 CYS A 214 1555 1555 2.04 SSBOND 3 CYS A 252 CYS A 289 1555 1555 2.04 SSBOND 4 CYS B 46 CYS B 53 1555 1555 2.03 SSBOND 5 CYS B 210 CYS B 214 1555 1555 2.04 SSBOND 6 CYS B 252 CYS B 289 1555 1555 2.04 CISPEP 1 THR A 23 PRO A 24 0 -0.24 CISPEP 2 LEU A 112 PRO A 113 0 0.69 CISPEP 3 PRO A 300 PRO A 301 0 0.09 CISPEP 4 GLY A 303 PRO A 304 0 -0.14 CISPEP 5 THR B 23 PRO B 24 0 0.02 CISPEP 6 LEU B 112 PRO B 113 0 -0.08 CISPEP 7 PRO B 300 PRO B 301 0 0.11 CISPEP 8 GLY B 303 PRO B 304 0 0.03 SITE 1 AC1 22 THR B 13 GLN B 14 TYR B 15 ASP B 33 SITE 2 AC1 22 GLY B 35 TRP B 40 PRO B 42 HIS B 56 SITE 3 AC1 22 TYR B 78 VAL B 106 MET B 109 PRO B 113 SITE 4 AC1 22 PHE B 114 ALA B 117 PHE B 119 ASP B 120 SITE 5 AC1 22 GLY B 121 VAL B 122 ASP B 219 GLY B 221 SITE 6 AC1 22 SER B 223 HOH B 855 CRYST1 141.917 141.917 141.917 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007046 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007046 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007046 0.00000