PDB Short entry for 2FVG HEADER HYDROLASE 30-JAN-06 2FVG TITLE CRYSTAL STRUCTURE OF ENDOGLUCANASE (TM1049) FROM THERMOTOGA MARITIMA TITLE 2 AT 2.01 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOGLUCANASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8; SOURCE 5 GENE: TM1049; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MH4TEVA KEYWDS TM1049, ENDOGLUCANASE, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI, KEYWDS 3 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 25-JAN-23 2FVG 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2FVG 1 VERSN REVDAT 2 24-FEB-09 2FVG 1 VERSN REVDAT 1 07-MAR-06 2FVG 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF ENDOGLUCANASE (TM1049) FROM THERMOTOGA JRNL TITL 2 MARITIMA AT 2.01 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 21615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1177 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1137 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 57 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2351 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 113 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.36000 REMARK 3 B22 (A**2) : 0.44000 REMARK 3 B33 (A**2) : -4.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.195 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.173 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.396 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2402 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3251 ; 1.539 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 307 ; 3.080 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 95 ;30.192 ;24.737 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 395 ;10.251 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;13.835 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 378 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1781 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1012 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1686 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 128 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 34 ; 0.185 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.122 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1579 ; 1.941 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2486 ; 2.978 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 923 ; 5.021 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 765 ; 7.038 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 152 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5530 39.8330 53.9430 REMARK 3 T TENSOR REMARK 3 T11: 0.0020 T22: 0.0490 REMARK 3 T33: 0.1579 T12: -0.0296 REMARK 3 T13: -0.0553 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 4.1015 L22: 1.0008 REMARK 3 L33: 2.8879 L12: -1.3436 REMARK 3 L13: -2.7752 L23: 1.1901 REMARK 3 S TENSOR REMARK 3 S11: -0.0618 S12: 0.2389 S13: -0.2399 REMARK 3 S21: -0.0332 S22: -0.2241 S23: 0.3004 REMARK 3 S31: -0.1018 S32: -0.3074 S33: 0.2859 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 153 A 223 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6730 35.2500 51.6010 REMARK 3 T TENSOR REMARK 3 T11: -0.0407 T22: 0.1092 REMARK 3 T33: 0.1159 T12: -0.0807 REMARK 3 T13: -0.0495 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 0.6902 L22: 1.2460 REMARK 3 L33: 3.3499 L12: 0.0597 REMARK 3 L13: -1.4973 L23: 0.2259 REMARK 3 S TENSOR REMARK 3 S11: -0.0460 S12: 0.1142 S13: 0.0095 REMARK 3 S21: -0.0463 S22: -0.1054 S23: 0.0407 REMARK 3 S31: -0.0898 S32: -0.0795 S33: 0.1514 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 224 A 292 REMARK 3 ORIGIN FOR THE GROUP (A): 15.2790 22.9070 61.5700 REMARK 3 T TENSOR REMARK 3 T11: -0.0352 T22: 0.1393 REMARK 3 T33: 0.1540 T12: -0.0544 REMARK 3 T13: -0.0312 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 0.5920 L22: 4.1176 REMARK 3 L33: 6.5179 L12: 0.1659 REMARK 3 L13: -0.8530 L23: -1.6858 REMARK 3 S TENSOR REMARK 3 S11: 0.0347 S12: -0.2213 S13: -0.1394 REMARK 3 S21: -0.0108 S22: -0.0151 S23: 0.2128 REMARK 3 S31: 0.5345 S32: -0.0603 S33: -0.0195 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 293 A 339 REMARK 3 ORIGIN FOR THE GROUP (A): 15.9110 31.6710 57.1520 REMARK 3 T TENSOR REMARK 3 T11: 0.0648 T22: 0.1259 REMARK 3 T33: 0.1208 T12: -0.0236 REMARK 3 T13: -0.0504 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 2.2327 L22: 1.2091 REMARK 3 L33: 6.4413 L12: 0.2224 REMARK 3 L13: -2.4527 L23: 0.6536 REMARK 3 S TENSOR REMARK 3 S11: -0.0664 S12: -0.0791 S13: 0.0985 REMARK 3 S21: 0.0333 S22: 0.0320 S23: -0.0531 REMARK 3 S31: -0.0388 S32: 0.2665 S33: 0.0344 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS 2. THE PEPTIDE BOND BETWEEN ASP 166 AND ASP 167 REMARK 3 NEAR THE PUTATIV ACTIVE SITE WAS MODELED IN THE CIS CONFORMATION REMARK 3 3.ELECTRON DENSITIES BETWEEN RESIDUE RANGES 109-119,198-202, AND REMARK 3 279-291 WERE DISORDERED; THEREFORE, THESE REGIONS WERE NOT REMARK 3 MODELED. 4. THE ELECTRON DENSITY MAP SHOWS SUBSTANTIAL REMARK 3 DIFFERENCE DENSITY THE VICINITY OF LYS 249. REMARK 4 REMARK 4 2FVG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1000036359. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-OCT-05; 29-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; ALS REMARK 200 BEAMLINE : 23-ID-D; 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979815; 0.9797, 1.0000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111); DOUBLE REMARK 200 CRYSTAL SI(111) REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS IN K REMARK 200 -B GEOMETRY; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD; ADSC REMARK 200 QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22815 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 29.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.9 REMARK 200 DATA REDUNDANCY : 3.490 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 20.0% PEG-8000, 0.1M CAPS REMARK 280 PH 10.5 , VAPOR DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.57500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.39000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.77000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.39000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.57500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.77000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 109 REMARK 465 HIS A 110 REMARK 465 LEU A 111 REMARK 465 GLN A 112 REMARK 465 ARG A 113 REMARK 465 ASP A 114 REMARK 465 GLU A 115 REMARK 465 GLU A 116 REMARK 465 ASN A 117 REMARK 465 THR A 118 REMARK 465 PRO A 119 REMARK 465 THR A 198 REMARK 465 GLY A 199 REMARK 465 LEU A 200 REMARK 465 ARG A 201 REMARK 465 GLY A 202 REMARK 465 ALA A 279 REMARK 465 GLY A 280 REMARK 465 GLY A 281 REMARK 465 THR A 282 REMARK 465 ASP A 283 REMARK 465 ALA A 284 REMARK 465 GLY A 285 REMARK 465 ARG A 286 REMARK 465 TYR A 287 REMARK 465 ALA A 288 REMARK 465 ARG A 289 REMARK 465 THR A 290 REMARK 465 ALA A 291 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CE NZ REMARK 470 LYS A 18 CD CE NZ REMARK 470 LYS A 73 CE NZ REMARK 470 ARG A 88 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 101 NZ REMARK 470 ARG A 121 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 123 CG CD OE1 OE2 REMARK 470 SER A 132 OG REMARK 470 SER A 133 OG REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 LYS A 156 CD CE NZ REMARK 470 SER A 183 OG REMARK 470 GLU A 197 CG CD OE1 OE2 REMARK 470 GLU A 208 CG CD OE1 OE2 REMARK 470 LYS A 211 CE NZ REMARK 470 GLU A 228 CG CD OE1 OE2 REMARK 470 ARG A 249 CD NE CZ NH1 NH2 REMARK 470 LYS A 255 CD CE NZ REMARK 470 ARG A 277 CZ NH1 NH2 REMARK 470 THR A 278 OG1 CG2 REMARK 470 HIS A 307 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 333 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 98 57.03 39.48 REMARK 500 TRP A 234 66.62 -100.89 REMARK 500 ARG A 249 -27.57 69.97 REMARK 500 SER A 308 130.50 -35.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 342 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 282916 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE: REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV REMARK 999 PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE REMARK 999 TARGET SEQUENCE. DBREF 2FVG A 1 339 UNP Q9X0D9 Q9X0D9_THEMA 1 339 SEQADV 2FVG GLY A 0 UNP Q9X0D9 EXPRESSION TAG SEQADV 2FVG MSE A 1 UNP Q9X0D9 MET 1 MODIFIED RESIDUE SEQADV 2FVG MSE A 8 UNP Q9X0D9 MET 8 MODIFIED RESIDUE SEQADV 2FVG MSE A 9 UNP Q9X0D9 MET 9 MODIFIED RESIDUE SEQADV 2FVG MSE A 61 UNP Q9X0D9 MET 61 MODIFIED RESIDUE SEQADV 2FVG MSE A 274 UNP Q9X0D9 MET 274 MODIFIED RESIDUE SEQRES 1 A 340 GLY MSE TYR LEU LYS GLU LEU SER MSE MSE PRO GLY VAL SEQRES 2 A 340 SER GLY ASP GLU GLY LYS VAL ARG ASP PHE ILE LYS SER SEQRES 3 A 340 LYS ILE GLU GLY LEU VAL ASP ASN LEU TYR THR ASP VAL SEQRES 4 A 340 LEU GLY ASN LEU ILE ALA LEU LYS ARG GLY ARG ASP SER SEQRES 5 A 340 SER LYS LYS LEU LEU VAL SER ALA HIS MSE ASP GLU VAL SEQRES 6 A 340 GLY PHE VAL VAL SER LYS ILE GLU LYS ASP GLY LYS VAL SEQRES 7 A 340 SER PHE LEU PRO VAL GLY GLY VAL ASP PRO ARG ILE LEU SEQRES 8 A 340 PRO GLY LYS VAL VAL GLN VAL LYS ASN LEU LYS GLY VAL SEQRES 9 A 340 ILE GLY TYR ARG PRO ILE HIS LEU GLN ARG ASP GLU GLU SEQRES 10 A 340 ASN THR PRO PRO ARG PHE GLU ASN LEU ARG ILE ASP PHE SEQRES 11 A 340 GLY PHE SER SER ALA ASP GLU ALA LYS LYS TYR VAL SER SEQRES 12 A 340 ILE GLY ASP TYR VAL SER PHE VAL SER ASP TYR ILE GLU SEQRES 13 A 340 LYS ASN GLY ARG ALA VAL GLY LYS ALA PHE ASP ASP ARG SEQRES 14 A 340 ALA GLY CYS SER VAL LEU ILE ASP VAL LEU GLU SER GLY SEQRES 15 A 340 VAL SER PRO ALA TYR ASP THR TYR PHE VAL PHE THR VAL SEQRES 16 A 340 GLN GLU GLU THR GLY LEU ARG GLY SER ALA VAL VAL VAL SEQRES 17 A 340 GLU GLN LEU LYS PRO THR CYS ALA ILE VAL VAL GLU THR SEQRES 18 A 340 THR THR ALA GLY ASP ASN PRO GLU LEU GLU GLU ARG LYS SEQRES 19 A 340 TRP ALA THR HIS LEU GLY ASP GLY PRO ALA ILE THR PHE SEQRES 20 A 340 TYR HIS ARG GLY TYR VAL ILE PRO LYS GLU ILE PHE GLN SEQRES 21 A 340 THR ILE VAL ASP THR ALA LYS ASN ASN ASP ILE PRO PHE SEQRES 22 A 340 GLN MSE LYS ARG ARG THR ALA GLY GLY THR ASP ALA GLY SEQRES 23 A 340 ARG TYR ALA ARG THR ALA TYR GLY VAL PRO ALA GLY VAL SEQRES 24 A 340 ILE SER THR PRO ALA ARG TYR ILE HIS SER PRO ASN SER SEQRES 25 A 340 ILE ILE ASP LEU ASN ASP TYR GLU ASN THR LYS LYS LEU SEQRES 26 A 340 ILE LYS VAL LEU VAL GLU GLU GLY LYS ILE VAL GLU VAL SEQRES 27 A 340 VAL SER MODRES 2FVG MSE A 1 MET SELENOMETHIONINE MODRES 2FVG MSE A 8 MET SELENOMETHIONINE MODRES 2FVG MSE A 9 MET SELENOMETHIONINE MODRES 2FVG MSE A 61 MET SELENOMETHIONINE MODRES 2FVG MSE A 274 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 8 8 HET MSE A 9 8 HET MSE A 61 8 HET MSE A 274 8 HET EDO A 340 4 HET EDO A 341 4 HET EDO A 342 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 EDO 3(C2 H6 O2) FORMUL 5 HOH *113(H2 O) HELIX 1 1 TYR A 2 MSE A 9 1 8 HELIX 2 2 GLU A 16 GLU A 28 1 13 HELIX 3 3 GLY A 29 VAL A 31 5 3 HELIX 4 4 ASP A 86 LEU A 90 5 5 HELIX 5 5 SER A 133 LYS A 139 1 7 HELIX 6 6 ALA A 164 SER A 180 1 17 HELIX 7 7 SER A 203 LYS A 211 1 9 HELIX 8 8 PRO A 254 ASN A 268 1 15 HELIX 9 9 LEU A 315 GLY A 332 1 18 HELIX 10 10 GLY A 332 VAL A 337 1 6 SHEET 1 A 9 ASN A 33 THR A 36 0 SHEET 2 A 9 LEU A 42 LYS A 46 -1 O LEU A 45 N ASN A 33 SHEET 3 A 9 TYR A 186 THR A 193 -1 O PHE A 190 N ALA A 44 SHEET 4 A 9 ASP A 50 HIS A 60 1 N VAL A 57 O TYR A 189 SHEET 5 A 9 CYS A 214 ALA A 223 1 O VAL A 218 N SER A 58 SHEET 6 A 9 ALA A 296 TYR A 305 1 O TYR A 305 N ALA A 223 SHEET 7 A 9 SER A 311 ASP A 314 -1 O ILE A 312 N ARG A 304 SHEET 8 A 9 ARG A 159 GLY A 162 -1 N ALA A 160 O ILE A 313 SHEET 9 A 9 ILE A 154 LYS A 156 -1 N ILE A 154 O VAL A 161 SHEET 1 B 8 ASN A 33 THR A 36 0 SHEET 2 B 8 LEU A 42 LYS A 46 -1 O LEU A 45 N ASN A 33 SHEET 3 B 8 TYR A 186 THR A 193 -1 O PHE A 190 N ALA A 44 SHEET 4 B 8 ASP A 50 HIS A 60 1 N VAL A 57 O TYR A 189 SHEET 5 B 8 CYS A 214 ALA A 223 1 O VAL A 218 N SER A 58 SHEET 6 B 8 ALA A 296 TYR A 305 1 O TYR A 305 N ALA A 223 SHEET 7 B 8 ALA A 243 ILE A 244 -1 N ALA A 243 O SER A 300 SHEET 8 B 8 GLN A 273 MSE A 274 1 O GLN A 273 N ILE A 244 SHEET 1 C 7 GLY A 65 ILE A 71 0 SHEET 2 C 7 VAL A 77 VAL A 82 -1 O SER A 78 N LYS A 70 SHEET 3 C 7 LEU A 125 ASP A 128 -1 O ILE A 127 N VAL A 77 SHEET 4 C 7 LEU A 100 TYR A 106 -1 N GLY A 105 O ARG A 126 SHEET 5 C 7 VAL A 94 VAL A 97 -1 N VAL A 95 O GLY A 102 SHEET 6 C 7 TYR A 146 PHE A 149 -1 O SER A 148 N GLN A 96 SHEET 7 C 7 GLY A 65 ILE A 71 -1 N PHE A 66 O VAL A 147 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N TYR A 2 1555 1555 1.33 LINK C SER A 7 N MSE A 8 1555 1555 1.33 LINK C MSE A 8 N MSE A 9 1555 1555 1.32 LINK C MSE A 9 N PRO A 10 1555 1555 1.36 LINK C HIS A 60 N MSE A 61 1555 1555 1.32 LINK C MSE A 61 N ASP A 62 1555 1555 1.33 LINK C GLN A 273 N MSE A 274 1555 1555 1.33 LINK C MSE A 274 N LYS A 275 1555 1555 1.32 CISPEP 1 ASP A 166 ASP A 167 0 2.51 CISPEP 2 SER A 308 PRO A 309 0 9.46 SITE 1 AC1 1 THR A 36 SITE 1 AC2 7 GLU A 63 VAL A 64 PHE A 149 LYS A 163 SITE 2 AC2 7 ALA A 164 PRO A 309 HOH A 385 SITE 1 AC3 5 ASN A 41 VAL A 194 GLU A 196 SER A 203 SITE 2 AC3 5 TYR A 292 CRYST1 63.150 67.540 82.780 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015835 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014806 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012080 0.00000