PDB Short entry for 2FVZ HEADER HYDROLASE 31-JAN-06 2FVZ TITLE HUMAN INOSITOL MONOPHOSPHOSPHATASE 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INOSITOL MONOPHOSPHATASE 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: IMPASE 2, IMP 2, INOSITOL-1(OR 4)-MONOPHOSPHATASE 2, MYO- COMPND 5 INOSITOL MONOPHOSPHATASE A2; COMPND 6 EC: 3.1.3.25; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IMPA2, IMP.18P; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4 KEYWDS INOSITOL METABOLISM, INOSITOL MONOPHOSPHATASE, STRUCTURAL GENOMICS, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.OGG,B.M.HALLBERG,C.ARROWSMITH,H.BERGLUND,R.COLLINS,A.EDWARDS,M.EHN, AUTHOR 2 S.FLODIN,S.GRASLUND,M.HAMMARSTROM,M.HOGBOM,L.HOLMBERG-SCHIAVONE, AUTHOR 3 T.KOTENYOVA,P.KURSULA,P.NILSSON-EHLE,P.NORDLUND,T.NYMAN,C.PERSSON, AUTHOR 4 J.SAGEMARK,P.STENMARK,M.SUNDSTROM,S.VAN DEN BERG,J.WEIGELT, AUTHOR 5 A.G.THORSELL,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 23-MAY-18 2FVZ 1 REMARK REVDAT 2 24-FEB-09 2FVZ 1 VERSN REVDAT 1 21-FEB-06 2FVZ 0 JRNL AUTH A.G.THORSELL,D.OGG,H.BERGLUND,R.COLLINS,M.EHN,S.FLODIN, JRNL AUTH 2 S.GRASLUND,M.HAMMARSTROM,M.HOGBOM,L.HOLMBERG-SCHIAVONE, JRNL AUTH 3 T.KOTENYOVA,P.KURSULA,P.NILSSON-EHLE,C.PERSSON,P.NORDLUND, JRNL AUTH 4 T.NYMAN,J.SAGEMARK,P.STENMARK,S.VAN DEN BERG,J.WEIGELT, JRNL AUTH 5 B.M.HALLBERG JRNL TITL STRUCTURE OF HUMAN INOSITOL MONOPHOSPHATASE 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELX REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.214 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.211 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 1.700 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 865 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 50340 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.199 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.199 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 1.800 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 749 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 41671 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7516 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 30068 REMARK 3 NUMBER OF RESTRAINTS : 31372 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.021 REMARK 3 ANGLE DISTANCES (A) : 0.021 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.033 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.097 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.032 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.060 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.000 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.104 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228 REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THIS IS A TWINNED STRUCTURE. THE REMARK 3 TWINNING OPERATOR IS (H,K,L) -> (H,-K,-L) AND THE TWINNING REMARK 3 FRACTION IS 0.5. REMARK 4 REMARK 4 2FVZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000036376. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-5 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9075 REMARK 200 MONOCHROMATOR : SI-911 REMARK 200 OPTICS : MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51914 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.43300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 6000, 0.1M HEPES PH 6.8, 0.2M REMARK 280 NACL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.47500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 42 REMARK 465 ARG A 43 REMARK 465 VAL A 44 REMARK 465 SER A 45 REMARK 465 THR A 46 REMARK 465 LYS A 47 REMARK 465 THR A 48 REMARK 465 SER A 49 REMARK 465 ALA A 50 REMARK 465 ALA A 51 REMARK 465 ASP A 52 REMARK 465 LEU A 53 REMARK 465 VAL A 54 REMARK 465 ALA A 83 REMARK 465 ALA A 84 REMARK 465 ALA A 85 REMARK 465 SER A 86 REMARK 465 GLY A 87 REMARK 465 GLN A 278 REMARK 465 THR A 279 REMARK 465 ILE A 280 REMARK 465 ASN A 281 REMARK 465 TYR A 282 REMARK 465 GLY A 283 REMARK 465 ARG A 284 REMARK 465 ASP A 285 REMARK 465 ASP A 286 REMARK 465 GLU A 287 REMARK 465 LYS A 288 REMARK 465 LYS B 42 REMARK 465 ARG B 43 REMARK 465 VAL B 44 REMARK 465 SER B 45 REMARK 465 THR B 46 REMARK 465 LYS B 47 REMARK 465 THR B 48 REMARK 465 SER B 49 REMARK 465 ALA B 50 REMARK 465 ALA B 51 REMARK 465 ASP B 52 REMARK 465 LEU B 53 REMARK 465 VAL B 54 REMARK 465 ALA B 83 REMARK 465 ALA B 84 REMARK 465 ALA B 85 REMARK 465 SER B 86 REMARK 465 GLY B 87 REMARK 465 GLN B 278 REMARK 465 THR B 279 REMARK 465 ILE B 280 REMARK 465 ASN B 281 REMARK 465 TYR B 282 REMARK 465 GLY B 283 REMARK 465 ARG B 284 REMARK 465 ASP B 285 REMARK 465 ASP B 286 REMARK 465 GLU B 287 REMARK 465 LYS B 288 REMARK 465 LYS C 42 REMARK 465 ARG C 43 REMARK 465 VAL C 44 REMARK 465 SER C 45 REMARK 465 THR C 46 REMARK 465 LYS C 47 REMARK 465 THR C 48 REMARK 465 SER C 49 REMARK 465 ALA C 50 REMARK 465 ALA C 51 REMARK 465 ASP C 52 REMARK 465 LEU C 53 REMARK 465 VAL C 54 REMARK 465 ALA C 83 REMARK 465 ALA C 84 REMARK 465 ALA C 85 REMARK 465 SER C 86 REMARK 465 GLY C 87 REMARK 465 GLN C 278 REMARK 465 THR C 279 REMARK 465 ILE C 280 REMARK 465 ASN C 281 REMARK 465 TYR C 282 REMARK 465 GLY C 283 REMARK 465 ARG C 284 REMARK 465 ASP C 285 REMARK 465 ASP C 286 REMARK 465 GLU C 287 REMARK 465 LYS C 288 REMARK 465 LYS D 42 REMARK 465 ARG D 43 REMARK 465 VAL D 44 REMARK 465 SER D 45 REMARK 465 THR D 46 REMARK 465 LYS D 47 REMARK 465 THR D 48 REMARK 465 SER D 49 REMARK 465 ALA D 50 REMARK 465 ALA D 51 REMARK 465 ASP D 52 REMARK 465 LEU D 53 REMARK 465 VAL D 54 REMARK 465 ALA D 83 REMARK 465 ALA D 84 REMARK 465 ALA D 85 REMARK 465 SER D 86 REMARK 465 GLY D 87 REMARK 465 GLN D 278 REMARK 465 THR D 279 REMARK 465 ILE D 280 REMARK 465 ASN D 281 REMARK 465 TYR D 282 REMARK 465 GLY D 283 REMARK 465 ARG D 284 REMARK 465 ASP D 285 REMARK 465 ASP D 286 REMARK 465 GLU D 287 REMARK 465 LYS D 288 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 89 CG CD CE NZ REMARK 470 LEU A 277 CG CD1 CD2 REMARK 470 LYS B 89 CG CD CE NZ REMARK 470 LEU B 277 CG CD1 CD2 REMARK 470 LEU C 277 CG CD1 CD2 REMARK 470 LYS D 89 CG CD CE NZ REMARK 470 LEU D 277 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA D 88 N LYS D 89 1.55 REMARK 500 O LYS D 89 N VAL D 91 1.69 REMARK 500 OD2 ASP D 179 OG1 THR D 182 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 71 CB GLU B 71 CG 0.143 REMARK 500 GLU B 71 CD GLU B 71 OE1 0.118 REMARK 500 GLU B 71 CD GLU B 71 OE2 0.185 REMARK 500 ILE D 65 CG1 ILE D 65 CD1 0.513 REMARK 500 GLU D 68 CD GLU D 68 OE1 0.071 REMARK 500 ALA D 88 C LYS D 89 N -0.591 REMARK 500 LYS D 89 C LYS D 89 O 0.967 REMARK 500 ARG D 178 C ASP D 179 N -0.247 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA D 88 CA - C - N ANGL. DEV. = 14.1 DEGREES REMARK 500 ALA D 88 O - C - N ANGL. DEV. = -21.5 DEGREES REMARK 500 LYS D 89 C - N - CA ANGL. DEV. = 31.6 DEGREES REMARK 500 LYS D 89 O - C - N ANGL. DEV. = -42.8 DEGREES REMARK 500 ARG D 178 O - C - N ANGL. DEV. = -14.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 40 171.61 -50.24 REMARK 500 ARG A 70 -78.61 -51.47 REMARK 500 ILE A 79 87.71 -151.80 REMARK 500 LYS A 89 -118.46 -156.84 REMARK 500 THR A 93 -150.46 -75.43 REMARK 500 PRO A 114 48.99 -71.57 REMARK 500 GLU A 129 -75.61 -85.89 REMARK 500 ASN A 153 74.38 44.88 REMARK 500 VAL A 159 -164.10 -61.90 REMARK 500 ILE A 174 -72.35 -64.19 REMARK 500 LYS A 197 38.21 83.77 REMARK 500 SER A 206 112.28 -161.21 REMARK 500 GLN A 224 144.36 175.86 REMARK 500 LYS B 36 -80.13 -49.63 REMARK 500 GLU B 129 -77.82 -74.93 REMARK 500 ARG B 146 98.35 -51.21 REMARK 500 VAL B 159 -176.78 -56.64 REMARK 500 THR B 163 -2.18 -154.19 REMARK 500 LYS B 167 19.05 -148.99 REMARK 500 PRO B 176 -108.92 -47.17 REMARK 500 LYS B 177 126.83 -39.63 REMARK 500 PRO B 180 -31.12 -34.40 REMARK 500 SER B 188 -71.66 -49.33 REMARK 500 GLN B 224 127.01 -172.75 REMARK 500 CYS B 229 -62.64 15.40 REMARK 500 VAL B 237 -70.57 -44.81 REMARK 500 CYS C 90 77.73 -104.88 REMARK 500 THR C 115 73.09 -155.76 REMARK 500 ARG C 148 -6.48 -147.11 REMARK 500 LYS C 177 -179.83 -67.61 REMARK 500 ARG C 178 4.03 -161.06 REMARK 500 PRO C 180 70.44 -61.09 REMARK 500 ALA C 181 -66.31 -179.63 REMARK 500 SER C 206 108.50 -167.85 REMARK 500 GLN C 224 135.87 176.04 REMARK 500 LEU C 232 -41.95 -132.03 REMARK 500 ALA C 233 -75.38 -48.92 REMARK 500 LEU C 254 101.41 -57.24 REMARK 500 GLU C 268 -71.11 -49.49 REMARK 500 ALA C 276 87.37 -62.46 REMARK 500 LYS D 36 -79.91 -47.52 REMARK 500 GLU D 40 -139.13 -54.75 REMARK 500 LYS D 89 -58.02 27.32 REMARK 500 CYS D 90 57.66 -102.90 REMARK 500 THR D 93 -150.53 -89.04 REMARK 500 PRO D 114 45.98 -75.06 REMARK 500 GLU D 129 -71.54 -96.53 REMARK 500 HIS D 135 92.18 -55.20 REMARK 500 ARG D 148 47.64 -103.60 REMARK 500 PRO D 176 -92.35 -75.24 REMARK 500 REMARK 500 THIS ENTRY HAS 52 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA C 88 LYS C 89 -51.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ALA D 88 -22.80 REMARK 500 LYS D 89 -57.77 REMARK 500 ARG D 178 23.86 REMARK 500 REMARK 500 REMARK: NULL DBREF 2FVZ A 16 288 UNP O14732 IMPA2_HUMAN 16 288 DBREF 2FVZ B 16 288 UNP O14732 IMPA2_HUMAN 16 288 DBREF 2FVZ C 16 288 UNP O14732 IMPA2_HUMAN 16 288 DBREF 2FVZ D 16 288 UNP O14732 IMPA2_HUMAN 16 288 SEQRES 1 A 273 TRP GLU GLU CYS PHE GLN ALA ALA VAL GLN LEU ALA LEU SEQRES 2 A 273 ARG ALA GLY GLN ILE ILE ARG LYS ALA LEU THR GLU GLU SEQRES 3 A 273 LYS ARG VAL SER THR LYS THR SER ALA ALA ASP LEU VAL SEQRES 4 A 273 THR GLU THR ASP HIS LEU VAL GLU ASP LEU ILE ILE SER SEQRES 5 A 273 GLU LEU ARG GLU ARG PHE PRO SER HIS ARG PHE ILE ALA SEQRES 6 A 273 GLU GLU ALA ALA ALA SER GLY ALA LYS CYS VAL LEU THR SEQRES 7 A 273 HIS SER PRO THR TRP ILE ILE ASP PRO ILE ASP GLY THR SEQRES 8 A 273 CYS ASN PHE VAL HIS ARG PHE PRO THR VAL ALA VAL SER SEQRES 9 A 273 ILE GLY PHE ALA VAL ARG GLN GLU LEU GLU PHE GLY VAL SEQRES 10 A 273 ILE TYR HIS CYS THR GLU GLU ARG LEU TYR THR GLY ARG SEQRES 11 A 273 ARG GLY ARG GLY ALA PHE CYS ASN GLY GLN ARG LEU ARG SEQRES 12 A 273 VAL SER GLY GLU THR ASP LEU SER LYS ALA LEU VAL LEU SEQRES 13 A 273 THR GLU ILE GLY PRO LYS ARG ASP PRO ALA THR LEU LYS SEQRES 14 A 273 LEU PHE LEU SER ASN MET GLU ARG LEU LEU HIS ALA LYS SEQRES 15 A 273 ALA HIS GLY VAL ARG VAL ILE GLY SER SER THR LEU ALA SEQRES 16 A 273 LEU CYS HIS LEU ALA SER GLY ALA ALA ASP ALA TYR TYR SEQRES 17 A 273 GLN PHE GLY LEU HIS CYS TRP ASP LEU ALA ALA ALA THR SEQRES 18 A 273 VAL ILE ILE ARG GLU ALA GLY GLY ILE VAL ILE ASP THR SEQRES 19 A 273 SER GLY GLY PRO LEU ASP LEU MET ALA CYS ARG VAL VAL SEQRES 20 A 273 ALA ALA SER THR ARG GLU MET ALA MET LEU ILE ALA GLN SEQRES 21 A 273 ALA LEU GLN THR ILE ASN TYR GLY ARG ASP ASP GLU LYS SEQRES 1 B 273 TRP GLU GLU CYS PHE GLN ALA ALA VAL GLN LEU ALA LEU SEQRES 2 B 273 ARG ALA GLY GLN ILE ILE ARG LYS ALA LEU THR GLU GLU SEQRES 3 B 273 LYS ARG VAL SER THR LYS THR SER ALA ALA ASP LEU VAL SEQRES 4 B 273 THR GLU THR ASP HIS LEU VAL GLU ASP LEU ILE ILE SER SEQRES 5 B 273 GLU LEU ARG GLU ARG PHE PRO SER HIS ARG PHE ILE ALA SEQRES 6 B 273 GLU GLU ALA ALA ALA SER GLY ALA LYS CYS VAL LEU THR SEQRES 7 B 273 HIS SER PRO THR TRP ILE ILE ASP PRO ILE ASP GLY THR SEQRES 8 B 273 CYS ASN PHE VAL HIS ARG PHE PRO THR VAL ALA VAL SER SEQRES 9 B 273 ILE GLY PHE ALA VAL ARG GLN GLU LEU GLU PHE GLY VAL SEQRES 10 B 273 ILE TYR HIS CYS THR GLU GLU ARG LEU TYR THR GLY ARG SEQRES 11 B 273 ARG GLY ARG GLY ALA PHE CYS ASN GLY GLN ARG LEU ARG SEQRES 12 B 273 VAL SER GLY GLU THR ASP LEU SER LYS ALA LEU VAL LEU SEQRES 13 B 273 THR GLU ILE GLY PRO LYS ARG ASP PRO ALA THR LEU LYS SEQRES 14 B 273 LEU PHE LEU SER ASN MET GLU ARG LEU LEU HIS ALA LYS SEQRES 15 B 273 ALA HIS GLY VAL ARG VAL ILE GLY SER SER THR LEU ALA SEQRES 16 B 273 LEU CYS HIS LEU ALA SER GLY ALA ALA ASP ALA TYR TYR SEQRES 17 B 273 GLN PHE GLY LEU HIS CYS TRP ASP LEU ALA ALA ALA THR SEQRES 18 B 273 VAL ILE ILE ARG GLU ALA GLY GLY ILE VAL ILE ASP THR SEQRES 19 B 273 SER GLY GLY PRO LEU ASP LEU MET ALA CYS ARG VAL VAL SEQRES 20 B 273 ALA ALA SER THR ARG GLU MET ALA MET LEU ILE ALA GLN SEQRES 21 B 273 ALA LEU GLN THR ILE ASN TYR GLY ARG ASP ASP GLU LYS SEQRES 1 C 273 TRP GLU GLU CYS PHE GLN ALA ALA VAL GLN LEU ALA LEU SEQRES 2 C 273 ARG ALA GLY GLN ILE ILE ARG LYS ALA LEU THR GLU GLU SEQRES 3 C 273 LYS ARG VAL SER THR LYS THR SER ALA ALA ASP LEU VAL SEQRES 4 C 273 THR GLU THR ASP HIS LEU VAL GLU ASP LEU ILE ILE SER SEQRES 5 C 273 GLU LEU ARG GLU ARG PHE PRO SER HIS ARG PHE ILE ALA SEQRES 6 C 273 GLU GLU ALA ALA ALA SER GLY ALA LYS CYS VAL LEU THR SEQRES 7 C 273 HIS SER PRO THR TRP ILE ILE ASP PRO ILE ASP GLY THR SEQRES 8 C 273 CYS ASN PHE VAL HIS ARG PHE PRO THR VAL ALA VAL SER SEQRES 9 C 273 ILE GLY PHE ALA VAL ARG GLN GLU LEU GLU PHE GLY VAL SEQRES 10 C 273 ILE TYR HIS CYS THR GLU GLU ARG LEU TYR THR GLY ARG SEQRES 11 C 273 ARG GLY ARG GLY ALA PHE CYS ASN GLY GLN ARG LEU ARG SEQRES 12 C 273 VAL SER GLY GLU THR ASP LEU SER LYS ALA LEU VAL LEU SEQRES 13 C 273 THR GLU ILE GLY PRO LYS ARG ASP PRO ALA THR LEU LYS SEQRES 14 C 273 LEU PHE LEU SER ASN MET GLU ARG LEU LEU HIS ALA LYS SEQRES 15 C 273 ALA HIS GLY VAL ARG VAL ILE GLY SER SER THR LEU ALA SEQRES 16 C 273 LEU CYS HIS LEU ALA SER GLY ALA ALA ASP ALA TYR TYR SEQRES 17 C 273 GLN PHE GLY LEU HIS CYS TRP ASP LEU ALA ALA ALA THR SEQRES 18 C 273 VAL ILE ILE ARG GLU ALA GLY GLY ILE VAL ILE ASP THR SEQRES 19 C 273 SER GLY GLY PRO LEU ASP LEU MET ALA CYS ARG VAL VAL SEQRES 20 C 273 ALA ALA SER THR ARG GLU MET ALA MET LEU ILE ALA GLN SEQRES 21 C 273 ALA LEU GLN THR ILE ASN TYR GLY ARG ASP ASP GLU LYS SEQRES 1 D 273 TRP GLU GLU CYS PHE GLN ALA ALA VAL GLN LEU ALA LEU SEQRES 2 D 273 ARG ALA GLY GLN ILE ILE ARG LYS ALA LEU THR GLU GLU SEQRES 3 D 273 LYS ARG VAL SER THR LYS THR SER ALA ALA ASP LEU VAL SEQRES 4 D 273 THR GLU THR ASP HIS LEU VAL GLU ASP LEU ILE ILE SER SEQRES 5 D 273 GLU LEU ARG GLU ARG PHE PRO SER HIS ARG PHE ILE ALA SEQRES 6 D 273 GLU GLU ALA ALA ALA SER GLY ALA LYS CYS VAL LEU THR SEQRES 7 D 273 HIS SER PRO THR TRP ILE ILE ASP PRO ILE ASP GLY THR SEQRES 8 D 273 CYS ASN PHE VAL HIS ARG PHE PRO THR VAL ALA VAL SER SEQRES 9 D 273 ILE GLY PHE ALA VAL ARG GLN GLU LEU GLU PHE GLY VAL SEQRES 10 D 273 ILE TYR HIS CYS THR GLU GLU ARG LEU TYR THR GLY ARG SEQRES 11 D 273 ARG GLY ARG GLY ALA PHE CYS ASN GLY GLN ARG LEU ARG SEQRES 12 D 273 VAL SER GLY GLU THR ASP LEU SER LYS ALA LEU VAL LEU SEQRES 13 D 273 THR GLU ILE GLY PRO LYS ARG ASP PRO ALA THR LEU LYS SEQRES 14 D 273 LEU PHE LEU SER ASN MET GLU ARG LEU LEU HIS ALA LYS SEQRES 15 D 273 ALA HIS GLY VAL ARG VAL ILE GLY SER SER THR LEU ALA SEQRES 16 D 273 LEU CYS HIS LEU ALA SER GLY ALA ALA ASP ALA TYR TYR SEQRES 17 D 273 GLN PHE GLY LEU HIS CYS TRP ASP LEU ALA ALA ALA THR SEQRES 18 D 273 VAL ILE ILE ARG GLU ALA GLY GLY ILE VAL ILE ASP THR SEQRES 19 D 273 SER GLY GLY PRO LEU ASP LEU MET ALA CYS ARG VAL VAL SEQRES 20 D 273 ALA ALA SER THR ARG GLU MET ALA MET LEU ILE ALA GLN SEQRES 21 D 273 ALA LEU GLN THR ILE ASN TYR GLY ARG ASP ASP GLU LYS HELIX 1 1 TRP A 16 THR A 39 1 24 HELIX 2 2 THR A 55 PHE A 73 1 19 HELIX 3 3 GLY A 105 HIS A 111 1 7 HELIX 4 4 ASP A 164 LYS A 167 5 4 HELIX 5 5 ASP A 179 ALA A 196 1 18 HELIX 6 6 SER A 206 SER A 216 1 11 HELIX 7 7 HIS A 228 ASP A 231 5 4 HELIX 8 8 LEU A 232 ALA A 242 1 11 HELIX 9 9 ASP A 255 ALA A 258 5 4 HELIX 10 10 THR A 266 ALA A 276 1 11 HELIX 11 11 TRP B 16 LEU B 38 1 23 HELIX 12 12 THR B 55 PHE B 73 1 19 HELIX 13 13 GLY B 105 ARG B 112 1 8 HELIX 14 14 ASP B 164 LYS B 167 5 4 HELIX 15 15 ASP B 179 ALA B 196 1 18 HELIX 16 16 SER B 206 GLY B 217 1 12 HELIX 17 17 CYS B 229 GLU B 241 1 13 HELIX 18 18 THR B 266 ALA B 276 1 11 HELIX 19 19 TRP C 16 THR C 39 1 24 HELIX 20 20 THR C 55 PHE C 73 1 19 HELIX 21 21 GLY C 105 ARG C 112 1 8 HELIX 22 22 ASP C 164 LYS C 167 5 4 HELIX 23 23 ALA C 181 ALA C 196 1 16 HELIX 24 24 SER C 206 SER C 216 1 11 HELIX 25 25 HIS C 228 ASP C 231 5 4 HELIX 26 26 LEU C 232 ALA C 242 1 11 HELIX 27 27 ASP C 255 ALA C 258 5 4 HELIX 28 28 THR C 266 ALA C 276 1 11 HELIX 29 29 TRP D 16 THR D 39 1 24 HELIX 30 30 THR D 55 PHE D 73 1 19 HELIX 31 31 GLY D 105 ARG D 112 1 8 HELIX 32 32 ASP D 164 LYS D 167 5 4 HELIX 33 33 PRO D 180 ALA D 196 1 17 HELIX 34 34 SER D 206 GLY D 217 1 12 HELIX 35 35 HIS D 228 ASP D 231 5 4 HELIX 36 36 LEU D 232 GLY D 243 1 12 HELIX 37 37 ASP D 255 ALA D 258 5 4 HELIX 38 38 THR D 266 GLN D 275 1 10 SHEET 1 A 7 ARG A 77 PHE A 78 0 SHEET 2 A 7 THR A 97 ASP A 104 1 O TRP A 98 N ARG A 77 SHEET 3 A 7 ALA A 117 VAL A 124 -1 O ALA A 117 N ASP A 104 SHEET 4 A 7 GLU A 127 HIS A 135 -1 O VAL A 132 N ILE A 120 SHEET 5 A 7 ARG A 140 ARG A 145 -1 O TYR A 142 N ILE A 133 SHEET 6 A 7 ALA A 150 CYS A 152 -1 O PHE A 151 N THR A 143 SHEET 7 A 7 GLN A 155 ARG A 156 -1 O GLN A 155 N CYS A 152 SHEET 1 B 5 GLY A 200 ARG A 202 0 SHEET 2 B 5 LEU A 169 LEU A 171 1 N VAL A 170 O GLY A 200 SHEET 3 B 5 ALA A 221 PHE A 225 1 O ALA A 221 N LEU A 171 SHEET 4 B 5 ARG A 260 ALA A 264 -1 O ALA A 263 N TYR A 222 SHEET 5 B 5 ILE A 245 ILE A 247 -1 N ILE A 247 O VAL A 262 SHEET 1 C 7 ARG B 77 ALA B 80 0 SHEET 2 C 7 THR B 97 ASP B 104 1 O TRP B 98 N ARG B 77 SHEET 3 C 7 ALA B 117 VAL B 124 -1 O GLY B 121 N ILE B 99 SHEET 4 C 7 GLU B 127 HIS B 135 -1 O GLU B 127 N VAL B 124 SHEET 5 C 7 ARG B 140 ARG B 145 -1 O ARG B 140 N HIS B 135 SHEET 6 C 7 ALA B 150 CYS B 152 -1 O PHE B 151 N THR B 143 SHEET 7 C 7 GLN B 155 ARG B 156 -1 O GLN B 155 N CYS B 152 SHEET 1 D 5 GLY B 200 ARG B 202 0 SHEET 2 D 5 LEU B 169 LEU B 171 1 N VAL B 170 O GLY B 200 SHEET 3 D 5 ALA B 221 PHE B 225 1 O ALA B 221 N LEU B 171 SHEET 4 D 5 ARG B 260 ALA B 264 -1 O ALA B 263 N TYR B 222 SHEET 5 D 5 ILE B 245 ILE B 247 -1 N ILE B 247 O VAL B 262 SHEET 1 E 7 ARG C 77 ILE C 79 0 SHEET 2 E 7 THR C 97 ASP C 104 1 O TRP C 98 N ARG C 77 SHEET 3 E 7 ALA C 117 VAL C 124 -1 O SER C 119 N ASP C 101 SHEET 4 E 7 GLU C 127 HIS C 135 -1 O GLU C 127 N VAL C 124 SHEET 5 E 7 ARG C 140 ARG C 145 -1 O TYR C 142 N ILE C 133 SHEET 6 E 7 GLY C 149 CYS C 152 -1 O PHE C 151 N THR C 143 SHEET 7 E 7 GLN C 155 ARG C 156 -1 O GLN C 155 N CYS C 152 SHEET 1 F 5 GLY C 200 ARG C 202 0 SHEET 2 F 5 LEU C 169 LEU C 171 1 N VAL C 170 O GLY C 200 SHEET 3 F 5 ALA C 221 PHE C 225 1 O ALA C 221 N LEU C 171 SHEET 4 F 5 ARG C 260 ALA C 264 -1 O ALA C 263 N TYR C 222 SHEET 5 F 5 ILE C 245 ILE C 247 -1 N ILE C 245 O ALA C 264 SHEET 1 G 7 ARG D 77 ALA D 80 0 SHEET 2 G 7 THR D 97 ASP D 104 1 O TRP D 98 N ILE D 79 SHEET 3 G 7 ALA D 117 VAL D 124 -1 O ALA D 117 N ASP D 104 SHEET 4 G 7 GLU D 127 HIS D 135 -1 O PHE D 130 N PHE D 122 SHEET 5 G 7 ARG D 140 ARG D 145 -1 O TYR D 142 N ILE D 133 SHEET 6 G 7 ARG D 148 CYS D 152 -1 O PHE D 151 N THR D 143 SHEET 7 G 7 GLN D 155 ARG D 156 -1 O GLN D 155 N CYS D 152 SHEET 1 H 5 GLY D 200 ARG D 202 0 SHEET 2 H 5 LEU D 169 LEU D 171 1 N VAL D 170 O GLY D 200 SHEET 3 H 5 ALA D 221 PHE D 225 1 O TYR D 223 N LEU D 171 SHEET 4 H 5 ARG D 260 ALA D 264 -1 O ALA D 263 N TYR D 222 SHEET 5 H 5 ILE D 245 ILE D 247 -1 N ILE D 247 O VAL D 262 SSBOND 1 CYS A 90 CYS A 229 1555 1555 2.06 SSBOND 2 CYS B 90 CYS B 229 1555 1555 1.99 SSBOND 3 CYS C 90 CYS C 229 1555 1555 2.08 SSBOND 4 CYS D 90 CYS D 229 1555 1555 2.03 CISPEP 1 ALA A 88 LYS A 89 0 -15.40 CRYST1 65.030 96.950 106.970 90.00 90.03 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015378 0.000000 0.000008 0.00000 SCALE2 0.000000 0.010315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009348 0.00000