PDB Short entry for 2FXO HEADER CONTRACTILE PROTEIN 06-FEB-06 2FXO TITLE STRUCTURE OF THE HUMAN BETA-MYOSIN S2 FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: DELTA-S2 FRAGMENT (838-963); COMPND 5 SYNONYM: BETA-MYOSIN, MYHC-BETA; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: HEART MUSCLE; SOURCE 6 GENE: HSBMHC; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS COILED COIL (DIMERIC, PARALLEL), FAMILIAL HYPERTROPHIC KEYWDS 2 CARDIOMYOPATHY, FHC-ASSOCIATED MUTANT E924K, THICK FILAMENT, KEYWDS 3 CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.BLANKENFELDT,N.H.THOMA,J.S.WRAY,M.GAUTEL,I.SCHLICHTING REVDAT 6 25-OCT-23 2FXO 1 REMARK REVDAT 5 10-NOV-21 2FXO 1 REMARK SEQADV REVDAT 4 18-OCT-17 2FXO 1 REMARK REVDAT 3 13-JUL-11 2FXO 1 VERSN REVDAT 2 24-FEB-09 2FXO 1 VERSN REVDAT 1 21-NOV-06 2FXO 0 JRNL AUTH W.BLANKENFELDT,N.H.THOMA,J.S.WRAY,M.GAUTEL,I.SCHLICHTING JRNL TITL CRYSTAL STRUCTURES OF HUMAN CARDIAC {BETA}-MYOSIN II JRNL TITL 2 S2-{DELTA} PROVIDE INSIGHT INTO THE FUNCTIONAL ROLE OF THE JRNL TITL 3 S2 SUBFRAGMENT JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 17713 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 17095604 JRNL DOI 10.1073/PNAS.0606741103 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.GRUEN,M.GAUTEL REMARK 1 TITL MUTATIONS IN BETA-MYOSIN S2 THAT CAUSE FAMILIAL HYPERTROPHIC REMARK 1 TITL 2 CARDIOMYOPATHY (FHC) ABOLISH THE INTERACTION WITH THE REMARK 1 TITL 3 REGULATORY DOMAIN OF MYOSIN-BINDING PROTEIN-C REMARK 1 REF J.MOL.BIOL. V. 286 933 1999 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 10024460 REMARK 1 DOI 10.1006/JMBI.1998.2522 REMARK 1 REFERENCE 2 REMARK 1 AUTH Y.LI,J.H.BROWN,L.RESHETNIKOVA,A.BLAZSEK,L.FARKAS,L.NYITRAY, REMARK 1 AUTH 2 C.COHEN REMARK 1 TITL VISUALIZATION OF AN UNSTABLE COILED COIL FROM THE SCALLOP REMARK 1 TITL 2 MYOSIN ROD REMARK 1 REF NATURE V. 424 341 2003 REMARK 1 REFN ISSN 0028-0836 REMARK 1 PMID 12867988 REMARK 1 DOI 10.1038/NATURE01801 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 19157 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.277 REMARK 3 R VALUE (WORKING SET) : 0.273 REMARK 3 FREE R VALUE : 0.349 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1040 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1396 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3780 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.5110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4145 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 61.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.30000 REMARK 3 B22 (A**2) : 0.74000 REMARK 3 B33 (A**2) : 1.76000 REMARK 3 B12 (A**2) : 1.34000 REMARK 3 B13 (A**2) : -5.88000 REMARK 3 B23 (A**2) : -0.69000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.891 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.419 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.458 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.647 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.876 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4151 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 3874 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5508 ; 1.526 ; 2.019 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9178 ; 3.650 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 504 ; 6.104 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 619 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4472 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 648 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 914 ; 0.233 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3836 ; 0.259 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2490 ; 0.104 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 57 ; 0.192 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 9 ; 0.189 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 68 ; 0.286 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.131 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2539 ; 6.269 ;10.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4054 ; 8.380 ;10.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1612 ; 6.774 ;10.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1454 ; 9.684 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -3 A 963 REMARK 3 RESIDUE RANGE : B -1 B 961 REMARK 3 ORIGIN FOR THE GROUP (A): -4.8110 -1.1590 -2.5750 REMARK 3 T TENSOR REMARK 3 T11: 0.1368 T22: 0.0196 REMARK 3 T33: 0.1116 T12: -0.0054 REMARK 3 T13: 0.1098 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 6.0365 L22: 0.2889 REMARK 3 L33: 2.3626 L12: 1.2256 REMARK 3 L13: 3.7589 L23: 0.8388 REMARK 3 S TENSOR REMARK 3 S11: 0.0751 S12: -0.0033 S13: -0.1861 REMARK 3 S21: -0.0104 S22: -0.0372 S23: -0.0309 REMARK 3 S31: 0.0352 S32: -0.0052 S33: -0.0379 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C -2 C 962 REMARK 3 RESIDUE RANGE : D -1 D 963 REMARK 3 ORIGIN FOR THE GROUP (A): -43.7230 10.0250 -25.6260 REMARK 3 T TENSOR REMARK 3 T11: 0.1523 T22: 0.0694 REMARK 3 T33: 0.1116 T12: -0.0038 REMARK 3 T13: 0.0784 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 5.9035 L22: 0.3286 REMARK 3 L33: 2.9717 L12: 1.3851 REMARK 3 L13: 4.2585 L23: 1.0037 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: 0.2158 S13: 0.2185 REMARK 3 S21: 0.0059 S22: -0.0620 S23: 0.0235 REMARK 3 S31: -0.0043 S32: 0.1017 S33: 0.0885 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. TARGET SIGMA VALUES FOR RESTRAINED B-FACTOR REMARK 3 REFINEMENT HAVE BEEN RELAXED TO 10 A*A TO REFLECT THE SPECIAL REMARK 3 SHAPE OF THE MOLECULE. ATOMS THAT COULD NOT BE LOCATED HAVE BEEN REMARK 3 ASSIGNED A TEMPERATURE FACTOR OF 500 A*A AND OCCUPANCY VALUE OF REMARK 3 0 FOR BETTER DISCERNABILITY. REMARK 4 REMARK 4 2FXO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000036432. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-01 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20190 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.38800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD WITH SEMI-BRUTE- FORCE REMARK 200 MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SHELXD, MOLEMAN2 REMARK 200 STARTING MODEL: PDB ENTRY 1XNM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, SODIUM ACETATE, TRIS-HCL, PH REMARK 280 7.50, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 ALA B 962 REMARK 465 LYS B 963 REMARK 465 GLY C -3 REMARK 465 LYS C 963 REMARK 465 GLY D -3 REMARK 465 SER D -2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 847 CG CD CE NZ REMARK 480 LYS A 871 CG CD CE NZ REMARK 480 GLU A 872 CG CD OE1 OE2 REMARK 480 LYS A 876 CE NZ REMARK 480 LYS A 924 CD CE NZ REMARK 480 LEU B 840 CG CD1 CD2 REMARK 480 LYS B 847 CG CD CE NZ REMARK 480 GLU B 854 CG CD OE1 OE2 REMARK 480 LYS B 865 CE NZ REMARK 480 LEU B 961 CG CD1 CD2 REMARK 480 LYS C 942 CG CD CE NZ REMARK 480 SER D -1 OG REMARK 480 LEU D 839 CG CD1 CD2 REMARK 480 LYS D 841 CE NZ REMARK 480 GLU D 872 CG CD OE1 OE2 REMARK 480 LYS D 876 CG CD CE NZ REMARK 480 GLN D 882 CG CD OE1 NE2 REMARK 480 LEU D 889 CD1 CD2 REMARK 480 GLU D 903 CG CD OE1 OE2 REMARK 480 LYS D 910 CG CD CE NZ REMARK 480 GLN D 914 CG CD OE1 NE2 REMARK 480 GLU D 931 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN B 907 NZ LYS D 865 2.13 REMARK 500 ND2 ASN A 933 OD1 ASN B 933 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP C 906 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP D 953 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP D 955 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 838 -19.31 -42.55 REMARK 500 LYS B 841 -16.90 -49.43 REMARK 500 ALA D 962 135.39 -24.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FXM RELATED DB: PDB REMARK 900 THE SAME PROTEIN, WILD TYPE REMARK 900 RELATED ID: 1NKN RELATED DB: PDB DBREF 2FXO A 838 963 UNP P12883 MYH7_HUMAN 838 963 DBREF 2FXO B 838 963 UNP P12883 MYH7_HUMAN 838 963 DBREF 2FXO C 838 963 UNP P12883 MYH7_HUMAN 838 963 DBREF 2FXO D 838 963 UNP P12883 MYH7_HUMAN 838 963 SEQADV 2FXO GLY A -3 UNP P12883 CLONING ARTIFACT SEQADV 2FXO SER A -2 UNP P12883 CLONING ARTIFACT SEQADV 2FXO SER A -1 UNP P12883 CLONING ARTIFACT SEQADV 2FXO LYS A 924 UNP P12883 GLU 924 ENGINEERED MUTATION SEQADV 2FXO GLY B -3 UNP P12883 CLONING ARTIFACT SEQADV 2FXO SER B -2 UNP P12883 CLONING ARTIFACT SEQADV 2FXO SER B -1 UNP P12883 CLONING ARTIFACT SEQADV 2FXO LYS B 924 UNP P12883 GLU 924 ENGINEERED MUTATION SEQADV 2FXO GLY C -3 UNP P12883 CLONING ARTIFACT SEQADV 2FXO SER C -2 UNP P12883 CLONING ARTIFACT SEQADV 2FXO SER C -1 UNP P12883 CLONING ARTIFACT SEQADV 2FXO LYS C 924 UNP P12883 GLU 924 ENGINEERED MUTATION SEQADV 2FXO GLY D -3 UNP P12883 CLONING ARTIFACT SEQADV 2FXO SER D -2 UNP P12883 CLONING ARTIFACT SEQADV 2FXO SER D -1 UNP P12883 CLONING ARTIFACT SEQADV 2FXO LYS D 924 UNP P12883 GLU 924 ENGINEERED MUTATION SEQRES 1 A 129 GLY SER SER PRO LEU LEU LYS SER ALA GLU ARG GLU LYS SEQRES 2 A 129 GLU MET ALA SER MET LYS GLU GLU PHE THR ARG LEU LYS SEQRES 3 A 129 GLU ALA LEU GLU LYS SER GLU ALA ARG ARG LYS GLU LEU SEQRES 4 A 129 GLU GLU LYS MET VAL SER LEU LEU GLN GLU LYS ASN ASP SEQRES 5 A 129 LEU GLN LEU GLN VAL GLN ALA GLU GLN ASP ASN LEU ALA SEQRES 6 A 129 ASP ALA GLU GLU ARG CYS ASP GLN LEU ILE LYS ASN LYS SEQRES 7 A 129 ILE GLN LEU GLU ALA LYS VAL LYS GLU MET ASN LYS ARG SEQRES 8 A 129 LEU GLU ASP GLU GLU GLU MET ASN ALA GLU LEU THR ALA SEQRES 9 A 129 LYS LYS ARG LYS LEU GLU ASP GLU CYS SER GLU LEU LYS SEQRES 10 A 129 ARG ASP ILE ASP ASP LEU GLU LEU THR LEU ALA LYS SEQRES 1 B 129 GLY SER SER PRO LEU LEU LYS SER ALA GLU ARG GLU LYS SEQRES 2 B 129 GLU MET ALA SER MET LYS GLU GLU PHE THR ARG LEU LYS SEQRES 3 B 129 GLU ALA LEU GLU LYS SER GLU ALA ARG ARG LYS GLU LEU SEQRES 4 B 129 GLU GLU LYS MET VAL SER LEU LEU GLN GLU LYS ASN ASP SEQRES 5 B 129 LEU GLN LEU GLN VAL GLN ALA GLU GLN ASP ASN LEU ALA SEQRES 6 B 129 ASP ALA GLU GLU ARG CYS ASP GLN LEU ILE LYS ASN LYS SEQRES 7 B 129 ILE GLN LEU GLU ALA LYS VAL LYS GLU MET ASN LYS ARG SEQRES 8 B 129 LEU GLU ASP GLU GLU GLU MET ASN ALA GLU LEU THR ALA SEQRES 9 B 129 LYS LYS ARG LYS LEU GLU ASP GLU CYS SER GLU LEU LYS SEQRES 10 B 129 ARG ASP ILE ASP ASP LEU GLU LEU THR LEU ALA LYS SEQRES 1 C 129 GLY SER SER PRO LEU LEU LYS SER ALA GLU ARG GLU LYS SEQRES 2 C 129 GLU MET ALA SER MET LYS GLU GLU PHE THR ARG LEU LYS SEQRES 3 C 129 GLU ALA LEU GLU LYS SER GLU ALA ARG ARG LYS GLU LEU SEQRES 4 C 129 GLU GLU LYS MET VAL SER LEU LEU GLN GLU LYS ASN ASP SEQRES 5 C 129 LEU GLN LEU GLN VAL GLN ALA GLU GLN ASP ASN LEU ALA SEQRES 6 C 129 ASP ALA GLU GLU ARG CYS ASP GLN LEU ILE LYS ASN LYS SEQRES 7 C 129 ILE GLN LEU GLU ALA LYS VAL LYS GLU MET ASN LYS ARG SEQRES 8 C 129 LEU GLU ASP GLU GLU GLU MET ASN ALA GLU LEU THR ALA SEQRES 9 C 129 LYS LYS ARG LYS LEU GLU ASP GLU CYS SER GLU LEU LYS SEQRES 10 C 129 ARG ASP ILE ASP ASP LEU GLU LEU THR LEU ALA LYS SEQRES 1 D 129 GLY SER SER PRO LEU LEU LYS SER ALA GLU ARG GLU LYS SEQRES 2 D 129 GLU MET ALA SER MET LYS GLU GLU PHE THR ARG LEU LYS SEQRES 3 D 129 GLU ALA LEU GLU LYS SER GLU ALA ARG ARG LYS GLU LEU SEQRES 4 D 129 GLU GLU LYS MET VAL SER LEU LEU GLN GLU LYS ASN ASP SEQRES 5 D 129 LEU GLN LEU GLN VAL GLN ALA GLU GLN ASP ASN LEU ALA SEQRES 6 D 129 ASP ALA GLU GLU ARG CYS ASP GLN LEU ILE LYS ASN LYS SEQRES 7 D 129 ILE GLN LEU GLU ALA LYS VAL LYS GLU MET ASN LYS ARG SEQRES 8 D 129 LEU GLU ASP GLU GLU GLU MET ASN ALA GLU LEU THR ALA SEQRES 9 D 129 LYS LYS ARG LYS LEU GLU ASP GLU CYS SER GLU LEU LYS SEQRES 10 D 129 ARG ASP ILE ASP ASP LEU GLU LEU THR LEU ALA LYS HELIX 1 1 SER A -2 LEU A 959 1 124 HELIX 2 2 SER B 842 LYS B 847 1 6 HELIX 3 3 LYS B 847 THR B 960 1 114 HELIX 4 4 SER C -2 LEU C 959 1 124 HELIX 5 5 SER D -1 GLN D 907 1 71 HELIX 6 6 GLN D 907 THR D 960 1 54 SSBOND 1 CYS A 947 CYS B 947 1555 1555 2.11 SSBOND 2 CYS C 947 CYS D 947 1555 1555 2.12 CRYST1 40.157 41.867 97.795 91.11 92.73 107.18 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024902 0.007699 0.001458 0.00000 SCALE2 0.000000 0.025001 0.000877 0.00000 SCALE3 0.000000 0.000000 0.010243 0.00000