PDB Short entry for 2GHQ HEADER HYDROLASE 27-MAR-06 2GHQ TITLE CTD-SPECIFIC PHOSPHATASE SCP1 IN COMPLEX WITH PEPTIDE C-TERMINAL TITLE 2 DOMAIN OF RNA POLYMERASE II COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOXY-TERMINAL DOMAIN RNA POLYMERASE II POLYPEPTIDE A COMPND 3 SMALL PHOSPHATASE 1; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: NUCLEAR LIM INTERACTOR-INTERACTING FACTOR 3, NLI-INTERACTING COMPND 6 FACTOR 3, NLI-IF; COMPND 7 EC: 3.1.3.16; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT; COMPND 12 CHAIN: C, D; COMPND 13 SYNONYM: RPB1; COMPND 14 EC: 2.7.7.6; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTDSP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 DERIVATIVES; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-PEPTIDE COMPLEX, HAD SUPERFAMILY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.ZHANG,J.P.NOEL REVDAT 4 30-AUG-23 2GHQ 1 REMARK REVDAT 3 20-OCT-21 2GHQ 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 2GHQ 1 VERSN REVDAT 1 05-DEC-06 2GHQ 0 JRNL AUTH Y.ZHANG,Y.KIM,N.GENOUD,J.GAO,J.W.KELLY,S.L.PFAFF,G.N.GILL, JRNL AUTH 2 J.E.DIXON,J.P.NOEL JRNL TITL DETERMINANTS FOR DEPHOSPHORYLATION OF THE RNA POLYMERASE II JRNL TITL 2 C-TERMINAL DOMAIN BY SCP1. JRNL REF MOL.CELL V. 24 759 2006 JRNL REFN ISSN 1097-2765 JRNL PMID 17157258 JRNL DOI 10.1016/J.MOLCEL.2006.10.027 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 35666 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHTOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1784 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.18 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3250 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 289 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3042 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 103 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : -0.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.61300 REMARK 3 B22 (A**2) : -5.22300 REMARK 3 B33 (A**2) : 5.83600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -9.01900 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 1.820 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GHQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037132. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35704 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 48.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.9400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.790 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1TA0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (1)0.5M AMMONIUM SULFATE, 0.2M LITHIUM REMARK 280 SULFATE, 100MM HEPES 7.5 (2) 1M SODIUM TARTRATE, 100MM TRIS PH REMARK 280 8.5 , PH 7.5 - 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 63.03350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.40650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 63.03350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.40650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 76 REMARK 465 HIS B 76 REMARK 465 PRO C 168 REMARK 465 SER C 169 REMARK 465 TYR C 170 REMARK 465 SER C 176 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO D 175 C PRO D 175 O 0.295 REMARK 500 PRO D 175 C SER D 176 N 0.219 REMARK 500 SER D 176 N SER D 176 CA 0.401 REMARK 500 SER D 176 CA SER D 176 CB 0.183 REMARK 500 SER D 176 CB SER D 176 OG 0.161 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER D 169 CB - CA - C ANGL. DEV. = 13.8 DEGREES REMARK 500 TYR D 170 C - N - CA ANGL. DEV. = -24.4 DEGREES REMARK 500 TYR D 170 N - CA - C ANGL. DEV. = 16.2 DEGREES REMARK 500 PRO D 175 CA - C - O ANGL. DEV. = -17.2 DEGREES REMARK 500 PRO D 175 O - C - N ANGL. DEV. = 22.9 DEGREES REMARK 500 SER D 176 C - N - CA ANGL. DEV. = 38.1 DEGREES REMARK 500 SER D 176 CA - CB - OG ANGL. DEV. = 22.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 97 -73.90 -98.20 REMARK 500 GLU A 99 -2.31 70.14 REMARK 500 PHE A 177 -169.15 -114.66 REMARK 500 ARG A 185 70.64 36.95 REMARK 500 HIS A 215 56.11 -145.86 REMARK 500 ASP A 227 7.19 -166.43 REMARK 500 ASN A 228 95.74 -68.77 REMARK 500 MET A 229 3.06 -67.92 REMARK 500 THR A 232 15.13 -145.70 REMARK 500 ARG A 255 121.52 68.19 REMARK 500 LEU B 97 -71.10 -103.88 REMARK 500 GLU B 99 -4.53 75.85 REMARK 500 PHE B 177 -166.69 -109.82 REMARK 500 HIS B 215 53.35 -144.39 REMARK 500 ASP B 227 9.11 -162.03 REMARK 500 ARG B 255 110.44 60.95 REMARK 500 TYR D 170 33.59 -174.89 REMARK 500 SEP D 171 114.13 24.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 151 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 96 OD1 REMARK 620 2 ASP A 98 O 88.3 REMARK 620 3 ASN A 207 OD1 72.0 79.0 REMARK 620 4 SEP C 174 O1P 108.1 105.0 176.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 257 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 96 OD1 REMARK 620 2 ASP B 98 O 88.2 REMARK 620 3 ASN B 207 OD1 75.4 85.6 REMARK 620 4 SEP D 174 O2P 88.8 94.5 164.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 257 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TA0 RELATED DB: PDB REMARK 900 APO SCP1 STRUCTURE DBREF 2GHQ A 77 256 UNP Q9GZU7 CTDS1_HUMAN 77 256 DBREF 2GHQ B 77 256 UNP Q9GZU7 CTDS1_HUMAN 77 256 DBREF 2GHQ C 168 176 UNP P24928 RPB1_HUMAN 1795 1803 DBREF 2GHQ D 168 176 UNP P24928 RPB1_HUMAN 1795 1803 SEQADV 2GHQ HIS A 76 UNP Q9GZU7 CLONING ARTIFACT SEQADV 2GHQ ASN A 96 UNP Q9GZU7 ASP 96 ENGINEERED MUTATION SEQADV 2GHQ HIS B 76 UNP Q9GZU7 CLONING ARTIFACT SEQADV 2GHQ ASN B 96 UNP Q9GZU7 ASP 96 ENGINEERED MUTATION SEQADV 2GHQ SEP C 171 UNP P24928 SER 1798 MODIFIED RESIDUE SEQADV 2GHQ SEP C 174 UNP P24928 SER 1801 MODIFIED RESIDUE SEQADV 2GHQ SEP D 171 UNP P24928 SER 1798 MODIFIED RESIDUE SEQADV 2GHQ SEP D 174 UNP P24928 SER 1801 MODIFIED RESIDUE SEQRES 1 A 181 HIS GLN TYR LEU LEU PRO GLU ALA LYS ALA GLN ASP SER SEQRES 2 A 181 ASP LYS ILE CYS VAL VAL ILE ASN LEU ASP GLU THR LEU SEQRES 3 A 181 VAL HIS SER SER PHE LYS PRO VAL ASN ASN ALA ASP PHE SEQRES 4 A 181 ILE ILE PRO VAL GLU ILE ASP GLY VAL VAL HIS GLN VAL SEQRES 5 A 181 TYR VAL LEU LYS ARG PRO HIS VAL ASP GLU PHE LEU GLN SEQRES 6 A 181 ARG MET GLY GLU LEU PHE GLU CYS VAL LEU PHE THR ALA SEQRES 7 A 181 SER LEU ALA LYS TYR ALA ASP PRO VAL ALA ASP LEU LEU SEQRES 8 A 181 ASP LYS TRP GLY ALA PHE ARG ALA ARG LEU PHE ARG GLU SEQRES 9 A 181 SER CYS VAL PHE HIS ARG GLY ASN TYR VAL LYS ASP LEU SEQRES 10 A 181 SER ARG LEU GLY ARG ASP LEU ARG ARG VAL LEU ILE LEU SEQRES 11 A 181 ASP ASN SER PRO ALA SER TYR VAL PHE HIS PRO ASP ASN SEQRES 12 A 181 ALA VAL PRO VAL ALA SER TRP PHE ASP ASN MET SER ASP SEQRES 13 A 181 THR GLU LEU HIS ASP LEU LEU PRO PHE PHE GLU GLN LEU SEQRES 14 A 181 SER ARG VAL ASP ASP VAL TYR SER VAL LEU ARG GLN SEQRES 1 B 181 HIS GLN TYR LEU LEU PRO GLU ALA LYS ALA GLN ASP SER SEQRES 2 B 181 ASP LYS ILE CYS VAL VAL ILE ASN LEU ASP GLU THR LEU SEQRES 3 B 181 VAL HIS SER SER PHE LYS PRO VAL ASN ASN ALA ASP PHE SEQRES 4 B 181 ILE ILE PRO VAL GLU ILE ASP GLY VAL VAL HIS GLN VAL SEQRES 5 B 181 TYR VAL LEU LYS ARG PRO HIS VAL ASP GLU PHE LEU GLN SEQRES 6 B 181 ARG MET GLY GLU LEU PHE GLU CYS VAL LEU PHE THR ALA SEQRES 7 B 181 SER LEU ALA LYS TYR ALA ASP PRO VAL ALA ASP LEU LEU SEQRES 8 B 181 ASP LYS TRP GLY ALA PHE ARG ALA ARG LEU PHE ARG GLU SEQRES 9 B 181 SER CYS VAL PHE HIS ARG GLY ASN TYR VAL LYS ASP LEU SEQRES 10 B 181 SER ARG LEU GLY ARG ASP LEU ARG ARG VAL LEU ILE LEU SEQRES 11 B 181 ASP ASN SER PRO ALA SER TYR VAL PHE HIS PRO ASP ASN SEQRES 12 B 181 ALA VAL PRO VAL ALA SER TRP PHE ASP ASN MET SER ASP SEQRES 13 B 181 THR GLU LEU HIS ASP LEU LEU PRO PHE PHE GLU GLN LEU SEQRES 14 B 181 SER ARG VAL ASP ASP VAL TYR SER VAL LEU ARG GLN SEQRES 1 C 9 PRO SER TYR SEP PRO THR SEP PRO SER SEQRES 1 D 9 PRO SER TYR SEP PRO THR SEP PRO SER MODRES 2GHQ SEP C 171 SER PHOSPHOSERINE MODRES 2GHQ SEP C 174 SER PHOSPHOSERINE MODRES 2GHQ SEP D 171 SER PHOSPHOSERINE MODRES 2GHQ SEP D 174 SER PHOSPHOSERINE HET SEP C 171 10 HET SEP C 174 10 HET SEP D 171 10 HET SEP D 174 10 HET MG B 257 1 HET MG C 151 1 HETNAM SEP PHOSPHOSERINE HETNAM MG MAGNESIUM ION HETSYN SEP PHOSPHONOSERINE FORMUL 3 SEP 4(C3 H8 N O6 P) FORMUL 5 MG 2(MG 2+) FORMUL 7 HOH *103(H2 O) HELIX 1 1 HIS A 134 PHE A 146 1 13 HELIX 2 2 LEU A 155 ASP A 167 1 13 HELIX 3 3 PHE A 177 CYS A 181 5 5 HELIX 4 4 ASP A 191 LEU A 195 5 5 HELIX 5 5 ASP A 198 ARG A 200 5 3 HELIX 6 6 SER A 208 VAL A 213 5 6 HELIX 7 7 THR A 232 SER A 245 1 14 HELIX 8 8 VAL A 250 ARG A 255 1 6 HELIX 9 9 HIS B 134 PHE B 146 1 13 HELIX 10 10 LEU B 155 ASP B 167 1 13 HELIX 11 11 PHE B 177 CYS B 181 5 5 HELIX 12 12 ASP B 191 LEU B 195 5 5 HELIX 13 13 ASP B 198 ARG B 200 5 3 HELIX 14 14 SER B 208 VAL B 213 5 6 HELIX 15 15 HIS B 215 ASP B 217 5 3 HELIX 16 16 THR B 232 VAL B 247 1 16 HELIX 17 17 VAL B 250 ARG B 255 1 6 SHEET 1 A 4 PHE A 172 LEU A 176 0 SHEET 2 A 4 GLU A 147 PHE A 151 1 N LEU A 150 O LEU A 176 SHEET 3 A 4 CYS A 92 ILE A 95 1 N ILE A 95 O VAL A 149 SHEET 4 A 4 VAL A 202 LEU A 205 1 O LEU A 203 N VAL A 94 SHEET 1 B 3 VAL A 102 SER A 105 0 SHEET 2 B 3 VAL A 123 LYS A 131 -1 O TYR A 128 N SER A 105 SHEET 3 B 3 PHE A 114 ILE A 120 -1 N PHE A 114 O VAL A 129 SHEET 1 C 2 VAL A 182 HIS A 184 0 SHEET 2 C 2 ASN A 187 VAL A 189 -1 O VAL A 189 N VAL A 182 SHEET 1 D 5 PHE B 172 LEU B 176 0 SHEET 2 D 5 GLU B 147 PHE B 151 1 N CYS B 148 O ARG B 173 SHEET 3 D 5 CYS B 92 ILE B 95 1 N ILE B 95 O VAL B 149 SHEET 4 D 5 VAL B 202 ASP B 206 1 O LEU B 205 N VAL B 94 SHEET 5 D 5 ALA B 219 PRO B 221 1 O VAL B 220 N ILE B 204 SHEET 1 E 3 VAL B 102 SER B 105 0 SHEET 2 E 3 VAL B 123 LYS B 131 -1 O TYR B 128 N SER B 105 SHEET 3 E 3 PHE B 114 ILE B 120 -1 N VAL B 118 O HIS B 125 SHEET 1 F 2 VAL B 182 HIS B 184 0 SHEET 2 F 2 ASN B 187 VAL B 189 -1 O ASN B 187 N HIS B 184 LINK C SEP C 171 N PRO C 172 1555 1555 1.34 LINK C THR C 173 N SEP C 174 1555 1555 1.33 LINK C SEP C 174 N PRO C 175 1555 1555 1.34 LINK C TYR D 170 N SEP D 171 1555 1555 1.21 LINK C SEP D 171 N PRO D 172 1555 1555 1.34 LINK C THR D 173 N SEP D 174 1555 1555 1.33 LINK C SEP D 174 N PRO D 175 1555 1555 1.39 LINK OD1 ASN A 96 MG MG C 151 1555 1555 2.18 LINK O ASP A 98 MG MG C 151 1555 1555 2.15 LINK OD1 ASN A 207 MG MG C 151 1555 1555 2.56 LINK OD1 ASN B 96 MG MG B 257 1555 1555 2.30 LINK O ASP B 98 MG MG B 257 1555 1555 2.35 LINK OD1 ASN B 207 MG MG B 257 1555 1555 2.26 LINK MG MG B 257 O2P SEP D 174 1555 1555 2.10 LINK MG MG C 151 O1P SEP C 174 1555 1555 1.63 SITE 1 AC1 4 ASN A 96 ASP A 98 ASN A 207 SEP C 174 SITE 1 AC2 4 ASN B 96 ASP B 98 ASN B 207 SEP D 174 CRYST1 126.067 78.813 62.992 90.00 112.17 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007932 0.000000 0.003232 0.00000 SCALE2 0.000000 0.012688 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017142 0.00000