PDB Short entry for 2GSB
HEADER    SIGNALING PROTEIN                       26-APR-06   2GSB              
TITLE     SOLUTION STRUCTURE OF THE SECOND SH2 DOMAIN OF HUMAN RAS GTPASE-      
TITLE    2 ACTIVATING PROTEIN 1                                                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: RAS GTPASE-ACTIVATING PROTEIN 1;                           
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: SH2 DOMAIN;                                                
COMPND   5 SYNONYM: GTPASE-ACTIVATING PROTEIN, GAP, RAS P21 PROTEIN ACTIVATOR,  
COMPND   6 P120GAP, RASGAP;                                                     
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: RASA1, RASA;                                                   
SOURCE   6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   7 EXPRESSION_SYSTEM_PLASMID: P050711-17;                               
SOURCE   8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS                           
KEYWDS    GTPASE-ACTIVATING PROTEIN, GAP, RAS P21 PROTEIN ACTIVATOR, P120GAP,   
KEYWDS   2 RASGAP, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN     
KEYWDS   3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL                 
KEYWDS   4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING PROTEIN              
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    C.KUROSAKI,T.SUETAKE,M.YOSHIDA,F.HAYASHI,S.YOKOYMA,RIKEN STRUCTURAL   
AUTHOR   2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)                                
REVDAT   3   09-MAR-22 2GSB    1       REMARK SEQADV                            
REVDAT   2   24-FEB-09 2GSB    1       VERSN                                    
REVDAT   1   01-MAY-07 2GSB    0                                                
JRNL        AUTH   C.KUROSAKI,T.SUETAKE,M.YOSHIDA,F.HAYASHI,S.YOKOYMA           
JRNL        TITL   SOLUTION STRUCTURE OF THE SECOND SH2 DOMAIN OF HUMAN RAS     
JRNL        TITL 2 GTPASE-ACTIVATING PROTEIN 1                                  
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : VNMR 6.1C, CYANA 2.0.17                              
REMARK   3   AUTHORS     : VARIAN (VNMR), GUNTERT, P. (CYANA)                   
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2GSB COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-MAY-06.                  
REMARK 100 THE DEPOSITION ID IS D_1000037492.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 293                                
REMARK 210  PH                             : 7.0                                
REMARK 210  IONIC STRENGTH                 : 120 MM                             
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1.27MM 13C, 15N-LABELED PROTEIN;   
REMARK 210                                   20MM D-TRIS-HCL (PH 7.0); 100MM    
REMARK 210                                   NACL; 1MM D-DTT; 0.02% NAN3, 10%   
REMARK 210                                   D2O; 90% H2O                       
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_13C-SEPARATED_NOESY; 3D_15N     
REMARK 210                                   -SEPARATED_NOESY                   
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ                            
REMARK 210  SPECTROMETER MODEL             : INOVA                              
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE 20031121, NMRVIEW 5.0.4,   
REMARK 210                                   KUJIRA 0.934, CYANA 2.0.17         
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : TARGET FUNCTION, STRUCTURES WITH   
REMARK 210                                   THE LOWEST ENERGY, STRUCTURES      
REMARK 210                                   WITH THE LEAST RESTRAINT           
REMARK 210                                   VIOLATIONS                         
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 SER A   6      148.95   -170.88                                   
REMARK 500  1 THR A  34      -69.74   -105.88                                   
REMARK 500  1 VAL A  38      140.12    -38.49                                   
REMARK 500  1 PRO A  50       91.35    -69.81                                   
REMARK 500  1 PRO A  72        1.44    -69.79                                   
REMARK 500  1 SER A 114      120.03    -34.51                                   
REMARK 500  1 SER A 117      100.89    -50.37                                   
REMARK 500  2 SER A   5      133.55    -38.25                                   
REMARK 500  2 ARG A   8       99.33    -52.61                                   
REMARK 500  2 ILE A  23      177.31    -57.72                                   
REMARK 500  2 PRO A  50       89.57    -69.81                                   
REMARK 500  2 PRO A  72        2.10    -69.74                                   
REMARK 500  2 ASN A  73       41.28   -105.02                                   
REMARK 500  2 MET A  78      -64.65    -95.77                                   
REMARK 500  2 ARG A  94      -35.77    -39.67                                   
REMARK 500  2 GLN A 111       64.55   -112.74                                   
REMARK 500  2 PRO A 116     -165.92    -69.79                                   
REMARK 500  3 SER A   2       42.10     38.27                                   
REMARK 500  3 SER A   5      163.30    -49.83                                   
REMARK 500  3 SER A   6       42.05   -107.93                                   
REMARK 500  3 ALA A  28      -35.62    -34.94                                   
REMARK 500  3 THR A  34      -72.69    -99.22                                   
REMARK 500  3 VAL A  38      142.49    -34.65                                   
REMARK 500  3 SER A  46      102.52    -57.14                                   
REMARK 500  3 PRO A  50       92.13    -69.80                                   
REMARK 500  3 ASP A 112      109.34    -44.03                                   
REMARK 500  4 SER A   5      -51.03   -131.31                                   
REMARK 500  4 ILE A  23     -178.96    -62.18                                   
REMARK 500  4 THR A  34      -74.30   -113.55                                   
REMARK 500  4 ASP A  47      -61.76    -94.46                                   
REMARK 500  4 PRO A  50        4.99    -69.78                                   
REMARK 500  4 MET A  78       68.51   -115.30                                   
REMARK 500  4 GLU A 100       39.95    -81.40                                   
REMARK 500  4 PRO A 107     -177.28    -69.70                                   
REMARK 500  4 ASP A 112      129.23    -37.14                                   
REMARK 500  4 GLN A 113       99.30    -50.73                                   
REMARK 500  4 SER A 118      100.57    -58.40                                   
REMARK 500  5 ARG A   8      120.43    -37.11                                   
REMARK 500  5 ILE A  23     -175.44    -55.24                                   
REMARK 500  5 THR A  34      -74.68   -118.74                                   
REMARK 500  5 LEU A  42      144.50   -173.58                                   
REMARK 500  5 SER A  46      102.70    -44.88                                   
REMARK 500  5 GLU A  61      -75.07    -80.12                                   
REMARK 500  5 PRO A  72        0.03    -69.74                                   
REMARK 500  5 GLN A  97      100.06    -48.48                                   
REMARK 500  5 LYS A 105      -68.38   -103.96                                   
REMARK 500  6 SER A   5      160.29    -40.14                                   
REMARK 500  6 THR A  34      -72.75   -128.45                                   
REMARK 500  6 SER A  46     -175.92    -57.70                                   
REMARK 500  6 ASP A  47      -75.20   -123.10                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     186 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  2GSB A    8   113  UNP    P20936   RASA1_HUMAN    341    446             
SEQADV 2GSB GLY A    1  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB SER A    2  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB SER A    3  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB GLY A    4  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB SER A    5  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB SER A    6  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB GLY A    7  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB SER A  114  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB GLY A  115  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB PRO A  116  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB SER A  117  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB SER A  118  UNP  P20936              CLONING ARTIFACT               
SEQADV 2GSB GLY A  119  UNP  P20936              CLONING ARTIFACT               
SEQRES   1 A  119  GLY SER SER GLY SER SER GLY ARG GLU GLU ASP PRO HIS          
SEQRES   2 A  119  GLU GLY LYS ILE TRP PHE HIS GLY LYS ILE SER LYS GLN          
SEQRES   3 A  119  GLU ALA TYR ASN LEU LEU MET THR VAL GLY GLN VAL CYS          
SEQRES   4 A  119  SER PHE LEU VAL ARG PRO SER ASP ASN THR PRO GLY ASP          
SEQRES   5 A  119  TYR SER LEU TYR PHE ARG THR ASN GLU ASN ILE GLN ARG          
SEQRES   6 A  119  PHE LYS ILE CYS PRO THR PRO ASN ASN GLN PHE MET MET          
SEQRES   7 A  119  GLY GLY ARG TYR TYR ASN SER ILE GLY ASP ILE ILE ASP          
SEQRES   8 A  119  HIS TYR ARG LYS GLU GLN ILE VAL GLU GLY TYR TYR LEU          
SEQRES   9 A  119  LYS GLU PRO VAL PRO MET GLN ASP GLN SER GLY PRO SER          
SEQRES  10 A  119  SER GLY                                                      
HELIX    1   1 PRO A   12  LYS A   16  5                                   5    
HELIX    2   2 SER A   24  THR A   34  1                                  11    
HELIX    3   3 SER A   85  ARG A   94  1                                  10    
SHEET    1   A 2 SER A  40  PRO A  45  0                                        
SHEET    2   A 2 TYR A  53  ARG A  58 -1  O  TYR A  56   N  LEU A  42           
SHEET    1   B 2 ILE A  68  THR A  71  0                                        
SHEET    2   B 2 GLN A  75  MET A  78 -1  O  GLN A  75   N  THR A  71           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000