PDB Short entry for 2H6C HEADER DNA BINDING PROTEIN 31-MAY-06 2H6C TITLE CRYSTAL STRUCTURE OF REDUCED CPRK IN ABSENCE OF ANY LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHLOROPHENOL REDUCTION GENE K; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CPRK; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFITOBACTERIUM DEHALOGENANS; SOURCE 3 ORGANISM_TAXID: 36854; SOURCE 4 GENE: CPRK; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA BINDING, HELIX-TURN-HELIX, CHLOROPHENOL, HALORESPIRATION, CPRK, KEYWDS 2 DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.LEVY,D.LEYS REVDAT 5 30-AUG-23 2H6C 1 REMARK REVDAT 4 13-JUL-11 2H6C 1 VERSN REVDAT 3 24-FEB-09 2H6C 1 VERSN REVDAT 2 03-OCT-06 2H6C 1 JRNL REVDAT 1 04-JUL-06 2H6C 0 JRNL AUTH M.G.JOYCE,C.LEVY,S.M.POP,B.D.BIEHL,T.I.DOUKOV,J.M.RYTER, JRNL AUTH 2 H.MAZON,H.SMIDT,R.H.VAN DEN HEUVEL,S.W.RAGSDALE, JRNL AUTH 3 J.VAN DER OOST,D.LEYS JRNL TITL CPRK CRYSTAL STRUCTURES REVEAL MECHANISM FOR TRANSCRIPTIONAL JRNL TITL 2 CONTROL OF HALORESPIRATION. JRNL REF J.BIOL.CHEM. V. 281 28318 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16803881 JRNL DOI 10.1074/JBC.M602654200 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 11256 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.307 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 582 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 832 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.4370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3281 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.62000 REMARK 3 B22 (A**2) : -0.26000 REMARK 3 B33 (A**2) : 0.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.24000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.493 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.275 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.826 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3365 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3098 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4546 ; 2.075 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7172 ; 0.963 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 417 ;10.955 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;38.373 ;23.724 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 592 ;24.274 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;22.611 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 520 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3710 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 707 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 911 ; 0.264 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3389 ; 0.226 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1686 ; 0.216 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2140 ; 0.108 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 99 ; 0.224 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 2 ; 0.067 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 11 ; 0.239 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 41 ; 0.249 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.126 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2160 ; 0.547 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 861 ; 0.098 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3348 ; 0.927 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1406 ; 1.477 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1198 ; 2.299 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 5 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 20 A 40 6 REMARK 3 1 B 20 B 40 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 331 ; 0.13 ; 5.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 331 ; 0.91 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 50 A 84 6 REMARK 3 1 B 50 B 84 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 2 A (A): 517 ; 0.15 ; 5.00 REMARK 3 LOOSE THERMAL 2 A (A**2): 517 ; 1.17 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 93 A 106 6 REMARK 3 1 B 93 B 106 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 3 A (A): 215 ; 0.15 ; 5.00 REMARK 3 LOOSE THERMAL 3 A (A**2): 215 ; 0.91 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 112 A 135 6 REMARK 3 1 B 112 B 135 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 4 A (A): 387 ; 0.54 ; 5.00 REMARK 3 LOOSE THERMAL 4 A (A**2): 387 ; 1.14 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 5 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 153 A 215 6 REMARK 3 1 B 153 B 215 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 5 A (A): 884 ; 0.21 ; 5.00 REMARK 3 LOOSE THERMAL 5 A (A**2): 884 ; 0.97 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 140 A 222 REMARK 3 ORIGIN FOR THE GROUP (A): 44.7169 -20.0778 30.1483 REMARK 3 T TENSOR REMARK 3 T11: 0.0746 T22: 0.0385 REMARK 3 T33: -0.1169 T12: 0.1255 REMARK 3 T13: 0.0183 T23: 0.0942 REMARK 3 L TENSOR REMARK 3 L11: 5.8450 L22: 1.0443 REMARK 3 L33: 6.6189 L12: 0.4130 REMARK 3 L13: 5.0098 L23: -0.9337 REMARK 3 S TENSOR REMARK 3 S11: -0.1922 S12: -0.7566 S13: -0.2873 REMARK 3 S21: 0.4880 S22: 0.1879 S23: 0.1626 REMARK 3 S31: -0.0355 S32: -0.2201 S33: 0.0043 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 140 B 222 REMARK 3 ORIGIN FOR THE GROUP (A): 57.6133 -9.3626 22.3074 REMARK 3 T TENSOR REMARK 3 T11: 0.2056 T22: 0.2705 REMARK 3 T33: -0.0345 T12: -0.0764 REMARK 3 T13: -0.1276 T23: 0.0295 REMARK 3 L TENSOR REMARK 3 L11: 3.7645 L22: 1.7470 REMARK 3 L33: 1.3546 L12: 2.5256 REMARK 3 L13: 0.3634 L23: 0.5073 REMARK 3 S TENSOR REMARK 3 S11: -0.2255 S12: 0.1163 S13: 0.1223 REMARK 3 S21: 0.1391 S22: 0.0457 S23: -0.5433 REMARK 3 S31: -0.6735 S32: 0.4267 S33: 0.1798 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): 21.7009 -3.1275 2.1532 REMARK 3 T TENSOR REMARK 3 T11: -0.2025 T22: -0.2679 REMARK 3 T33: -0.1444 T12: 0.0275 REMARK 3 T13: 0.0584 T23: 0.0380 REMARK 3 L TENSOR REMARK 3 L11: 8.4577 L22: 3.2661 REMARK 3 L33: 3.2528 L12: -0.7892 REMARK 3 L13: 2.6295 L23: 0.1246 REMARK 3 S TENSOR REMARK 3 S11: -0.2058 S12: -0.2183 S13: 0.6134 REMARK 3 S21: 0.3420 S22: 0.0139 S23: -0.0219 REMARK 3 S31: -0.2024 S32: -0.1016 S33: 0.1920 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 19 B 108 REMARK 3 ORIGIN FOR THE GROUP (A): 16.8477 -31.7628 12.2682 REMARK 3 T TENSOR REMARK 3 T11: -0.0467 T22: -0.1103 REMARK 3 T33: -0.2028 T12: -0.0328 REMARK 3 T13: 0.0900 T23: 0.0680 REMARK 3 L TENSOR REMARK 3 L11: 5.9504 L22: 3.0812 REMARK 3 L33: 1.0446 L12: -0.0029 REMARK 3 L13: 0.6314 L23: -0.3078 REMARK 3 S TENSOR REMARK 3 S11: -0.0221 S12: -0.3346 S13: -0.7759 REMARK 3 S21: 0.5338 S22: 0.2494 S23: -0.0990 REMARK 3 S31: 0.2398 S32: -0.0580 S33: -0.2273 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 109 B 136 REMARK 3 RESIDUE RANGE : A 109 A 136 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4195 -16.9416 3.7806 REMARK 3 T TENSOR REMARK 3 T11: -0.2127 T22: -0.0876 REMARK 3 T33: -0.3669 T12: -0.0098 REMARK 3 T13: 0.1463 T23: 0.0900 REMARK 3 L TENSOR REMARK 3 L11: 5.2136 L22: 3.1931 REMARK 3 L33: 0.2792 L12: -0.7217 REMARK 3 L13: 0.9750 L23: 0.4124 REMARK 3 S TENSOR REMARK 3 S11: 0.1196 S12: -0.2700 S13: -0.0304 REMARK 3 S21: 0.1355 S22: 0.1225 S23: 0.3629 REMARK 3 S31: 0.0679 S32: -0.2644 S33: -0.2421 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2H6C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000037984. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU), DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16387 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.25700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2H6B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 3350, 115MM MGCL2, 10MM DTT, PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.01500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 GLU A 4 REMARK 465 GLY A 5 REMARK 465 LEU A 6 REMARK 465 ASP A 7 REMARK 465 LYS A 8 REMARK 465 ASP A 9 REMARK 465 PHE A 10 REMARK 465 CYS A 11 REMARK 465 GLY A 12 REMARK 465 ALA A 13 REMARK 465 ILE A 14 REMARK 465 ILE A 15 REMARK 465 PRO A 16 REMARK 465 ASP A 17 REMARK 465 SER A 18 REMARK 465 GLU A 227 REMARK 465 GLN A 228 REMARK 465 THR A 229 REMARK 465 SER A 230 REMARK 465 TYR A 231 REMARK 465 TYR A 232 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ALA B 3 REMARK 465 GLU B 4 REMARK 465 GLY B 5 REMARK 465 LEU B 6 REMARK 465 ASP B 7 REMARK 465 LYS B 8 REMARK 465 ASP B 9 REMARK 465 PHE B 10 REMARK 465 CYS B 11 REMARK 465 GLY B 12 REMARK 465 ALA B 13 REMARK 465 ILE B 14 REMARK 465 ILE B 15 REMARK 465 PRO B 16 REMARK 465 ASP B 17 REMARK 465 SER B 18 REMARK 465 GLU B 227 REMARK 465 GLN B 228 REMARK 465 THR B 229 REMARK 465 SER B 230 REMARK 465 TYR B 231 REMARK 465 TYR B 232 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 24 CG CD CE NZ REMARK 470 ILE A 33 CD1 REMARK 470 GLU A 48 CB CG CD OE1 OE2 REMARK 470 ASP A 49 CG OD1 OD2 REMARK 470 LYS A 62 CG CD CE NZ REMARK 470 ARG A 86 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 110 CG CD OE1 OE2 REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 LYS A 213 CE NZ REMARK 470 GLU A 220 CB CG CD OE1 OE2 REMARK 470 LYS B 24 CG CD CE NZ REMARK 470 ILE B 33 CD1 REMARK 470 LYS B 128 CG CD CE NZ REMARK 470 ASN B 145 CG OD1 ND2 REMARK 470 THR B 146 OG1 CG2 REMARK 470 TYR B 147 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 166 CG CD CE NZ REMARK 470 ARG B 167 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 196 CG CD CE NZ REMARK 470 LYS B 203 CE NZ REMARK 470 LYS B 211 CG CD CE NZ REMARK 470 ASN B 212 CG OD1 ND2 REMARK 470 LYS B 213 CE NZ REMARK 470 GLU B 220 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 90 N ASN A 92 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE B 84 CB - CA - C ANGL. DEV. = -13.1 DEGREES REMARK 500 ASN B 145 N - CA - C ANGL. DEV. = -22.0 DEGREES REMARK 500 PRO B 149 C - N - CA ANGL. DEV. = 18.8 DEGREES REMARK 500 PRO B 149 C - N - CD ANGL. DEV. = -18.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 20 73.77 56.51 REMARK 500 LYS A 24 -16.17 -49.07 REMARK 500 ASN A 27 -5.44 -52.30 REMARK 500 ASP A 30 -6.11 -59.51 REMARK 500 PRO A 46 152.54 -48.48 REMARK 500 THR A 51 26.57 -143.93 REMARK 500 GLU A 68 -6.74 -49.06 REMARK 500 LYS A 73 139.58 174.85 REMARK 500 LEU A 75 -59.74 -126.63 REMARK 500 THR A 90 75.86 -114.30 REMARK 500 TYR A 95 94.06 -163.33 REMARK 500 ASP A 119 108.35 -161.31 REMARK 500 SER A 163 -25.83 171.92 REMARK 500 THR A 175 79.59 -103.40 REMARK 500 LEU A 178 93.90 -160.30 REMARK 500 GLU A 204 12.85 -69.55 REMARK 500 ASN A 218 61.18 -161.21 REMARK 500 ASN B 27 -9.74 -52.01 REMARK 500 PRO B 46 151.28 -48.90 REMARK 500 LEU B 75 -59.44 -124.91 REMARK 500 ILE B 144 142.58 175.10 REMARK 500 THR B 146 129.68 -39.80 REMARK 500 SER B 163 -18.65 142.61 REMARK 500 ARG B 167 99.25 -66.30 REMARK 500 LEU B 178 90.39 -161.73 REMARK 500 LEU B 207 145.49 -175.92 REMARK 500 ASN B 218 67.92 -164.13 REMARK 500 LEU B 225 56.34 -61.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE B 144 ASN B 145 -98.31 REMARK 500 TYR B 147 ASN B 148 -139.34 REMARK 500 ASN B 148 PRO B 149 -60.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2H6B RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE OXIDIZED CPRK IN COMPLEX WITH O- REMARK 900 CHLOROPHENOLACETIC ACID REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF THE PROTEIN WAS NOT AVAILABLE IN ANY REMARK 999 UNIPROT SEQUENCE DATABASE AT THE TIME OF PROCESSING DBREF 2H6C A 1 232 UNP Q9LAS2 Q9LAS2_9FIRM 1 232 DBREF 2H6C B 1 232 UNP Q9LAS2 Q9LAS2_9FIRM 1 232 SEQRES 1 A 232 MET SER ALA GLU GLY LEU ASP LYS ASP PHE CYS GLY ALA SEQRES 2 A 232 ILE ILE PRO ASP SER PHE PHE PRO ILE GLU LYS LEU ARG SEQRES 3 A 232 ASN TYR THR ASP MET GLY ILE ILE ARG GLU PHE ALA LYS SEQRES 4 A 232 GLY SER ALA ILE ILE MET PRO GLY GLU ASP THR THR SER SEQRES 5 A 232 MET ILE PHE LEU MET ASP GLY LYS ILE LYS LEU ASP ILE SEQRES 6 A 232 ILE PHE GLU ASP GLY SER GLU LYS LEU LEU TYR TYR ALA SEQRES 7 A 232 GLY SER ASN SER LEU ILE GLY ARG LEU TYR PRO THR GLY SEQRES 8 A 232 ASN ASN ILE TYR ALA THR ALA MET GLU GLN THR ARG THR SEQRES 9 A 232 CYS TRP PHE SER GLU GLU CYS LEU ARG VAL ILE PHE ARG SEQRES 10 A 232 THR ASP GLU ASP MET ILE PHE GLU ILE PHE LYS ASN TYR SEQRES 11 A 232 LEU THR LYS VAL ALA TYR TYR ALA ARG GLN VAL ALA GLU SEQRES 12 A 232 ILE ASN THR TYR ASN PRO THR ILE ARG ILE LEU ARG LEU SEQRES 13 A 232 PHE TYR GLU LEU CYS SER SER GLN GLY LYS ARG VAL GLY SEQRES 14 A 232 ASP THR TYR GLU ILE THR MET PRO LEU SER GLN LYS SER SEQRES 15 A 232 ILE GLY GLU ILE THR GLY ALA HIS HIS VAL THR VAL SER SEQRES 16 A 232 LYS VAL LEU ALA CYS LEU LYS LYS GLU ASN ILE LEU ASP SEQRES 17 A 232 LYS LYS LYS ASN LYS PHE ILE VAL TYR ASN LEU GLU GLU SEQRES 18 A 232 LEU LYS HIS LEU SER GLU GLN THR SER TYR TYR SEQRES 1 B 232 MET SER ALA GLU GLY LEU ASP LYS ASP PHE CYS GLY ALA SEQRES 2 B 232 ILE ILE PRO ASP SER PHE PHE PRO ILE GLU LYS LEU ARG SEQRES 3 B 232 ASN TYR THR ASP MET GLY ILE ILE ARG GLU PHE ALA LYS SEQRES 4 B 232 GLY SER ALA ILE ILE MET PRO GLY GLU ASP THR THR SER SEQRES 5 B 232 MET ILE PHE LEU MET ASP GLY LYS ILE LYS LEU ASP ILE SEQRES 6 B 232 ILE PHE GLU ASP GLY SER GLU LYS LEU LEU TYR TYR ALA SEQRES 7 B 232 GLY SER ASN SER LEU ILE GLY ARG LEU TYR PRO THR GLY SEQRES 8 B 232 ASN ASN ILE TYR ALA THR ALA MET GLU GLN THR ARG THR SEQRES 9 B 232 CYS TRP PHE SER GLU GLU CYS LEU ARG VAL ILE PHE ARG SEQRES 10 B 232 THR ASP GLU ASP MET ILE PHE GLU ILE PHE LYS ASN TYR SEQRES 11 B 232 LEU THR LYS VAL ALA TYR TYR ALA ARG GLN VAL ALA GLU SEQRES 12 B 232 ILE ASN THR TYR ASN PRO THR ILE ARG ILE LEU ARG LEU SEQRES 13 B 232 PHE TYR GLU LEU CYS SER SER GLN GLY LYS ARG VAL GLY SEQRES 14 B 232 ASP THR TYR GLU ILE THR MET PRO LEU SER GLN LYS SER SEQRES 15 B 232 ILE GLY GLU ILE THR GLY ALA HIS HIS VAL THR VAL SER SEQRES 16 B 232 LYS VAL LEU ALA CYS LEU LYS LYS GLU ASN ILE LEU ASP SEQRES 17 B 232 LYS LYS LYS ASN LYS PHE ILE VAL TYR ASN LEU GLU GLU SEQRES 18 B 232 LEU LYS HIS LEU SER GLU GLN THR SER TYR TYR HELIX 1 1 ILE A 22 ASN A 27 1 6 HELIX 2 2 TYR A 28 GLY A 32 5 5 HELIX 3 3 SER A 108 ASP A 119 1 12 HELIX 4 4 GLU A 120 GLU A 143 1 24 HELIX 5 5 TYR A 147 GLY A 165 1 19 HELIX 6 6 SER A 179 GLY A 188 1 10 HELIX 7 7 HIS A 190 GLU A 204 1 15 HELIX 8 8 ASN A 218 LYS A 223 1 6 HELIX 9 9 ILE B 22 THR B 29 5 8 HELIX 10 10 SER B 108 ASP B 119 1 12 HELIX 11 11 GLU B 120 GLU B 143 1 24 HELIX 12 12 PRO B 149 GLY B 165 1 17 HELIX 13 13 SER B 179 GLY B 188 1 10 HELIX 14 14 HIS B 190 GLU B 204 1 15 HELIX 15 15 ASN B 218 LEU B 225 1 8 SHEET 1 A 4 ILE A 33 PHE A 37 0 SHEET 2 A 4 THR A 102 PHE A 107 -1 O TRP A 106 N ILE A 33 SHEET 3 A 4 MET A 53 ASP A 58 -1 N PHE A 55 O CYS A 105 SHEET 4 A 4 SER A 82 ILE A 84 -1 O ILE A 84 N ILE A 54 SHEET 1 B 4 ALA A 42 ILE A 44 0 SHEET 2 B 4 ILE A 94 ALA A 98 -1 O ALA A 96 N ILE A 43 SHEET 3 B 4 ILE A 61 ILE A 66 -1 N LYS A 62 O THR A 97 SHEET 4 B 4 GLU A 72 ALA A 78 -1 O ALA A 78 N ILE A 61 SHEET 1 C 4 LYS A 166 VAL A 168 0 SHEET 2 C 4 THR A 171 ILE A 174 -1 O THR A 171 N VAL A 168 SHEET 3 C 4 PHE A 214 VAL A 216 -1 O VAL A 216 N TYR A 172 SHEET 4 C 4 LEU A 207 LYS A 209 -1 N ASP A 208 O ILE A 215 SHEET 1 D 4 ILE B 33 PHE B 37 0 SHEET 2 D 4 THR B 102 PHE B 107 -1 O THR B 104 N ARG B 35 SHEET 3 D 4 MET B 53 ASP B 58 -1 N PHE B 55 O CYS B 105 SHEET 4 D 4 SER B 82 ILE B 84 -1 O ILE B 84 N ILE B 54 SHEET 1 E 4 ALA B 42 ILE B 44 0 SHEET 2 E 4 ASN B 93 ALA B 98 -1 O ALA B 96 N ILE B 43 SHEET 3 E 4 ILE B 61 ILE B 66 -1 N LYS B 62 O THR B 97 SHEET 4 E 4 GLU B 72 ALA B 78 -1 O ALA B 78 N ILE B 61 SHEET 1 F 4 LYS B 166 VAL B 168 0 SHEET 2 F 4 THR B 171 ILE B 174 -1 O THR B 171 N VAL B 168 SHEET 3 F 4 PHE B 214 VAL B 216 -1 O VAL B 216 N TYR B 172 SHEET 4 F 4 LEU B 207 LYS B 209 -1 N ASP B 208 O ILE B 215 CRYST1 72.637 50.030 76.415 90.00 105.54 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013767 0.000000 0.003828 0.00000 SCALE2 0.000000 0.019988 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013583 0.00000