PDB Short entry for 2HAN HEADER TRANSCRIPTION/DNA 13-JUN-06 2HAN TITLE STRUCTURAL BASIS OF HETERODIMERIC ECDYSTEROID RECEPTOR INTERACTION TITLE 2 WITH NATURAL RESPONSE ELEMENT HSP27 GENE PROMOTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*CP*AP*AP*GP*GP*GP*TP*TP*CP*AP*AP*TP*GP*CP*AP*CP*TP*TP COMPND 3 *GP*T)-3'; COMPND 4 CHAIN: C; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: NATURAL ECDYSONE RESPONSE ELEMENT; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 5'-D(*GP*AP*CP*AP*AP*GP*TP*GP*CP*AP*TP*TP*GP*AP*AP*CP*CP*CP COMPND 9 *TP*T)-3'; COMPND 10 CHAIN: D; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: NATURAL ECDYSONE RESPONSE ELEMENT; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: PROTEIN ULTRASPIRACLE; COMPND 15 CHAIN: A; COMPND 16 FRAGMENT: ULTRASPIRACLE DNA BINDING DOMAIN; COMPND 17 SYNONYM: XR2C, CHORION FACTOR 1; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 4; COMPND 20 MOLECULE: ECDYSONE RECEPTOR; COMPND 21 CHAIN: B; COMPND 22 FRAGMENT: ECDSYONE RECEPTOR DNA BINDING DOMAIN; COMPND 23 SYNONYM: ECDYSTEROID RECEPTOR, 20-HYDROXY-ECDYSONE RECEPTOR, 20E COMPND 24 RECEPTOR, ECRH; COMPND 25 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 7 ORGANISM_COMMON: FRUIT FLY; SOURCE 8 ORGANISM_TAXID: 7227; SOURCE 9 GENE: USP, CF1, NR2B4; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 13 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 14 EXPRESSION_SYSTEM_PLASMID: PGEX-2T; SOURCE 15 MOL_ID: 4; SOURCE 16 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 17 ORGANISM_COMMON: FRUIT FLY; SOURCE 18 ORGANISM_TAXID: 7227; SOURCE 19 GENE: ECR, NR1H1; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PGEX-2T KEYWDS TRANSCRIPTION REGULATION, TRANSCRIPTION FACTOR, DNA-BINDING, NUCLEAR KEYWDS 2 PROTEIN, NUCLEAR RECEPTOR, ZINC FINGER, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.JAKOB,R.KOLODZIEJCZYK,M.ORLOWSKI,S.KRZYWDA,A.KOWALSKA,J.DUTKO- AUTHOR 2 GWOZDZ,T.GWOZDZ,M.KOCHMAN,M.JASKOLSKI,A.OZYHAR REVDAT 4 30-AUG-23 2HAN 1 REMARK SEQADV LINK REVDAT 3 18-OCT-17 2HAN 1 REMARK REVDAT 2 24-FEB-09 2HAN 1 VERSN REVDAT 1 22-MAY-07 2HAN 0 JRNL AUTH M.JAKOB,R.KOLODZIEJCZYK,M.ORLOWSKI,S.KRZYWDA,A.KOWALSKA, JRNL AUTH 2 J.DUTKO-GWOZDZ,T.GWOZDZ,M.KOCHMAN,M.JASKOLSKI,A.OZYHAR JRNL TITL NOVEL DNA-BINDING ELEMENT WITHIN THE C-TERMINAL EXTENSION OF JRNL TITL 2 THE NUCLEAR RECEPTOR DNA-BINDING DOMAIN. JRNL REF NUCLEIC ACIDS RES. V. 35 2705 2007 JRNL REFN ISSN 0305-1048 JRNL PMID 17426125 JRNL DOI 10.1093/NAR/GKM162 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23899 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1272 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1745 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1326 REMARK 3 NUCLEIC ACID ATOMS : 812 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 222 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.99000 REMARK 3 B22 (A**2) : -0.58000 REMARK 3 B33 (A**2) : -1.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.23000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.143 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.135 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.242 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2226 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1577 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3149 ; 2.029 ; 2.418 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3725 ; 1.118 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 163 ; 5.269 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 297 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1891 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 315 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 382 ; 0.188 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1835 ; 0.254 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1006 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 170 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.264 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 30 ; 0.361 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.150 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 811 ; 1.047 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1290 ; 1.898 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1415 ; 2.435 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1859 ; 3.556 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HAN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000038138. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8115 REMARK 200 MONOCHROMATOR : TRIANGULAR HORIZONTAL-FOCUSING REMARK 200 SI III MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MARCCD REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25368 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.54900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: 1R0O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% PEG 3350, 0.1 M NACL, 0.1 M MES, 1 REMARK 280 MM DTT, 5 MIKROM ZNCL2, 0.1 M LICL, 10 MM MGCL2 , PH 5.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.89500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 ASN A -3 REMARK 465 HIS A -2 REMARK 465 PRO A -1 REMARK 465 LEU A 0 REMARK 465 SER A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 GLN A 82 REMARK 465 GLY A 83 REMARK 465 ILE A 84 REMARK 465 HIS A 85 REMARK 465 ARG A 86 REMARK 465 ASP A 87 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 ALA B -1 REMARK 465 PRO B 0 REMARK 465 ARG B 88 REMARK 465 GLU B 89 REMARK 465 LYS B 90 REMARK 465 LYS B 91 REMARK 465 ALA B 92 REMARK 465 GLN B 93 REMARK 465 LYS B 94 REMARK 465 GLU B 95 REMARK 465 LYS B 96 REMARK 465 ASP B 97 REMARK 465 LYS B 98 REMARK 465 MET B 99 REMARK 465 THR B 100 REMARK 465 THR B 101 REMARK 465 SER B 102 REMARK 465 PRO B 103 REMARK 465 SER B 104 REMARK 465 SER B 105 REMARK 465 GLN B 106 REMARK 465 HIS B 107 REMARK 465 GLY B 108 REMARK 465 SER B 109 REMARK 465 PRO B 110 REMARK 465 GLY B 111 REMARK 465 ILE B 112 REMARK 465 HIS B 113 REMARK 465 ARG B 114 REMARK 465 ASP B 115 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DC C 1 O5' REMARK 470 DG D 1 O5' REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 4 CB CG CD CE NZ REMARK 480 ARG A 13 CD NE CZ NH1 NH2 REMARK 480 LYS A 37 CD CE NZ REMARK 480 ARG A 44 NE CZ NH1 NH2 REMARK 480 GLU A 79 CD OE1 OE2 REMARK 480 ARG B 1 NE CZ NH1 NH2 REMARK 480 LYS B 44 CD CE NZ REMARK 480 ARG B 47 CD NE CZ NH1 NH2 REMARK 480 GLU B 50 CD OE1 OE2 REMARK 480 GLN B 82 CG CD OE1 NE2 REMARK 480 LYS B 86 CB CG CD CE NZ REMARK 480 ARG B 87 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA D 4 O3' DA D 4 C3' -0.072 REMARK 500 DT D 11 C5 DT D 11 C7 0.041 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 4 O4' - C1' - N9 ANGL. DEV. = 5.9 DEGREES REMARK 500 DG C 5 O4' - C4' - C3' ANGL. DEV. = -2.9 DEGREES REMARK 500 DT C 8 C5 - C4 - O4 ANGL. DEV. = -4.8 DEGREES REMARK 500 DC C 9 OP1 - P - OP2 ANGL. DEV. = 11.7 DEGREES REMARK 500 DT C 18 O4' - C1' - N1 ANGL. DEV. = -6.2 DEGREES REMARK 500 DT C 18 N3 - C2 - O2 ANGL. DEV. = -4.5 DEGREES REMARK 500 DG D 1 C3' - O3' - P ANGL. DEV. = 7.3 DEGREES REMARK 500 DA D 4 C3' - O3' - P ANGL. DEV. = 8.7 DEGREES REMARK 500 DA D 5 C3' - O3' - P ANGL. DEV. = 7.2 DEGREES REMARK 500 DG D 6 O5' - P - OP2 ANGL. DEV. = -6.4 DEGREES REMARK 500 DG D 6 N3 - C2 - N2 ANGL. DEV. = -5.5 DEGREES REMARK 500 DT D 7 N3 - C4 - O4 ANGL. DEV. = 3.9 DEGREES REMARK 500 DA D 10 N1 - C6 - N6 ANGL. DEV. = 4.0 DEGREES REMARK 500 DT D 11 OP1 - P - OP2 ANGL. DEV. = 9.8 DEGREES REMARK 500 DT D 12 N3 - C2 - O2 ANGL. DEV. = -4.1 DEGREES REMARK 500 DG D 13 O3' - P - OP2 ANGL. DEV. = 7.3 DEGREES REMARK 500 DA D 14 O4' - C1' - N9 ANGL. DEV. = -4.9 DEGREES REMARK 500 DA D 15 O4' - C1' - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 DC D 16 O4' - C1' - C2' ANGL. DEV. = 3.3 DEGREES REMARK 500 DC D 18 O4' - C1' - N1 ANGL. DEV. = -7.7 DEGREES REMARK 500 DT D 19 C4 - C5 - C7 ANGL. DEV. = 4.6 DEGREES REMARK 500 ASP B 12 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 MET B 55 O - C - N ANGL. DEV. = -10.8 DEGREES REMARK 500 VAL B 70 CG1 - CB - CG2 ANGL. DEV. = 10.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 45 -118.70 -136.84 REMARK 500 PHE B 45 -128.93 -118.44 REMARK 500 ALA B 48 42.80 -161.01 REMARK 500 LYS B 86 -87.22 -38.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS B 86 ARG B 87 -148.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 MET B 55 -15.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 351 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 7 SG REMARK 620 2 CYS A 10 SG 110.8 REMARK 620 3 CYS A 24 SG 116.5 105.1 REMARK 620 4 CYS A 27 SG 108.2 113.2 102.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 352 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 43 SG REMARK 620 2 CYS A 49 SG 100.3 REMARK 620 3 CYS A 59 SG 110.1 114.0 REMARK 620 4 CYS A 62 SG 114.3 107.3 110.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 353 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 7 SG REMARK 620 2 CYS B 10 SG 110.8 REMARK 620 3 CYS B 24 SG 115.4 106.9 REMARK 620 4 CYS B 27 SG 108.7 111.8 103.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 354 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 43 SG REMARK 620 2 CYS B 49 SG 110.8 REMARK 620 3 CYS B 59 SG 105.7 113.9 REMARK 620 4 CYS B 62 SG 115.2 106.8 104.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 351 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 352 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 353 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 354 DBREF 2HAN A -3 82 UNP P20153 USP_DROME 94 179 DBREF 2HAN B -1 108 UNP P34021 ECR_DROME 256 365 DBREF 2HAN C 1 20 PDB 2HAN 2HAN 1 20 DBREF 2HAN D 1 20 PDB 2HAN 2HAN 1 20 SEQADV 2HAN GLY A -5 UNP P20153 CLONING ARTIFACT SEQADV 2HAN SER A -4 UNP P20153 CLONING ARTIFACT SEQADV 2HAN GLY A 83 UNP P20153 CLONING ARTIFACT SEQADV 2HAN ILE A 84 UNP P20153 CLONING ARTIFACT SEQADV 2HAN HIS A 85 UNP P20153 CLONING ARTIFACT SEQADV 2HAN ARG A 86 UNP P20153 CLONING ARTIFACT SEQADV 2HAN ASP A 87 UNP P20153 CLONING ARTIFACT SEQADV 2HAN GLY B -3 UNP P34021 CLONING ARTIFACT SEQADV 2HAN SER B -2 UNP P34021 CLONING ARTIFACT SEQADV 2HAN SER B 109 UNP P34021 CLONING ARTIFACT SEQADV 2HAN PRO B 110 UNP P34021 CLONING ARTIFACT SEQADV 2HAN GLY B 111 UNP P34021 CLONING ARTIFACT SEQADV 2HAN ILE B 112 UNP P34021 CLONING ARTIFACT SEQADV 2HAN HIS B 113 UNP P34021 CLONING ARTIFACT SEQADV 2HAN ARG B 114 UNP P34021 CLONING ARTIFACT SEQADV 2HAN ASP B 115 UNP P34021 CLONING ARTIFACT SEQRES 1 C 20 DC DA DA DG DG DG DT DT DC DA DA DT DG SEQRES 2 C 20 DC DA DC DT DT DG DT SEQRES 1 D 20 DG DA DC DA DA DG DT DG DC DA DT DT DG SEQRES 2 D 20 DA DA DC DC DC DT DT SEQRES 1 A 93 GLY SER ASN HIS PRO LEU SER GLY SER LYS HIS LEU CYS SEQRES 2 A 93 SER ILE CYS GLY ASP ARG ALA SER GLY LYS HIS TYR GLY SEQRES 3 A 93 VAL TYR SER CYS GLU GLY CYS LYS GLY PHE PHE LYS ARG SEQRES 4 A 93 THR VAL ARG LYS ASP LEU THR TYR ALA CYS ARG GLU ASN SEQRES 5 A 93 ARG ASN CYS ILE ILE ASP LYS ARG GLN ARG ASN ARG CYS SEQRES 6 A 93 GLN TYR CYS ARG TYR GLN LYS CYS LEU THR CYS GLY MET SEQRES 7 A 93 LYS ARG GLU ALA VAL GLN GLU GLU ARG GLN GLY ILE HIS SEQRES 8 A 93 ARG ASP SEQRES 1 B 119 GLY SER ALA PRO ARG VAL GLN GLU GLU LEU CYS LEU VAL SEQRES 2 B 119 CYS GLY ASP ARG ALA SER GLY TYR HIS TYR ASN ALA LEU SEQRES 3 B 119 THR CYS GLU GLY CYS LYS GLY PHE PHE ARG ARG SER VAL SEQRES 4 B 119 THR LYS SER ALA VAL TYR CYS CYS LYS PHE GLY ARG ALA SEQRES 5 B 119 CYS GLU MET ASP MET TYR MET ARG ARG LYS CYS GLN GLU SEQRES 6 B 119 CYS ARG LEU LYS LYS CYS LEU ALA VAL GLY MET ARG PRO SEQRES 7 B 119 GLU CYS VAL VAL PRO GLU ASN GLN CYS ALA MET LYS ARG SEQRES 8 B 119 ARG GLU LYS LYS ALA GLN LYS GLU LYS ASP LYS MET THR SEQRES 9 B 119 THR SER PRO SER SER GLN HIS GLY SER PRO GLY ILE HIS SEQRES 10 B 119 ARG ASP HET ZN A 351 1 HET ZN A 352 1 HET ZN B 353 1 HET ZN B 354 1 HETNAM ZN ZINC ION FORMUL 5 ZN 4(ZN 2+) FORMUL 9 HOH *222(H2 O) HELIX 1 1 CYS A 24 ASP A 38 1 15 HELIX 2 2 GLN A 55 ARG A 58 5 4 HELIX 3 3 CYS A 59 GLY A 71 1 13 HELIX 4 4 LYS A 73 VAL A 77 5 5 HELIX 5 5 CYS B 24 LYS B 37 1 14 HELIX 6 6 TYR B 54 LYS B 58 5 5 HELIX 7 7 CYS B 59 VAL B 70 1 12 HELIX 8 8 ARG B 73 VAL B 77 5 5 HELIX 9 9 ASN B 81 ARG B 87 1 7 SHEET 1 A 2 GLY A 16 HIS A 18 0 SHEET 2 A 2 VAL A 21 SER A 23 -1 O VAL A 21 N HIS A 18 SHEET 1 B 2 GLY B 16 HIS B 18 0 SHEET 2 B 2 ALA B 21 THR B 23 -1 O ALA B 21 N HIS B 18 LINK SG CYS A 7 ZN ZN A 351 1555 1555 2.34 LINK SG CYS A 10 ZN ZN A 351 1555 1555 2.31 LINK SG CYS A 24 ZN ZN A 351 1555 1555 2.39 LINK SG CYS A 27 ZN ZN A 351 1555 1555 2.29 LINK SG CYS A 43 ZN ZN A 352 1555 1555 2.45 LINK SG CYS A 49 ZN ZN A 352 1555 1555 2.42 LINK SG CYS A 59 ZN ZN A 352 1555 1555 2.31 LINK SG CYS A 62 ZN ZN A 352 1555 1555 2.11 LINK SG CYS B 7 ZN ZN B 353 1555 1555 2.30 LINK SG CYS B 10 ZN ZN B 353 1555 1555 2.34 LINK SG CYS B 24 ZN ZN B 353 1555 1555 2.30 LINK SG CYS B 27 ZN ZN B 353 1555 1555 2.35 LINK SG CYS B 43 ZN ZN B 354 1555 1555 2.35 LINK SG CYS B 49 ZN ZN B 354 1555 1555 2.47 LINK SG CYS B 59 ZN ZN B 354 1555 1555 2.35 LINK SG CYS B 62 ZN ZN B 354 1555 1555 2.25 SITE 1 AC1 4 CYS A 7 CYS A 10 CYS A 24 CYS A 27 SITE 1 AC2 4 CYS A 43 CYS A 49 CYS A 59 CYS A 62 SITE 1 AC3 4 CYS B 7 CYS B 10 CYS B 24 CYS B 27 SITE 1 AC4 4 CYS B 43 CYS B 49 CYS B 59 CYS B 62 CRYST1 46.716 59.790 65.179 90.00 106.70 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021406 0.000000 0.006422 0.00000 SCALE2 0.000000 0.016725 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016018 0.00000