PDB Short entry for 2HCC HEADER CHEMOKINE 03-JUL-98 2HCC TITLE SOLUTION STRUCTURE OF THE HUMAN CHEMOKINE HCC-2, NMR, 30 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUMAN CHEMOKINE HCC-2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 48-113 OF HCC-2 PRECURSOR; COMPND 5 SYNONYM: MACROPHAGE INFLAMMATORY PROTEIN 5 (MIP-5), LEUKOTACTIN-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS CHEMOKINE, HUMAN, HCC-2, MIP-5, LEUKOTACTIN-1, CHEMOTAXIS, CC- KEYWDS 2 CHEMOKINE EXPDTA SOLUTION NMR NUMMDL 30 AUTHOR H.STICHT,S.E.ESCHER,K.SCHWEIMER,W.G.FORSSMANN,P.ROESCH,K.ADERMANN REVDAT 3 09-MAR-22 2HCC 1 REMARK REVDAT 2 24-FEB-09 2HCC 1 VERSN REVDAT 1 13-JUL-99 2HCC 0 JRNL AUTH H.STICHT,S.E.ESCHER,K.SCHWEIMER,W.G.FORSSMANN,P.ROSCH, JRNL AUTH 2 K.ADERMANN JRNL TITL SOLUTION STRUCTURE OF THE HUMAN CC CHEMOKINE 2: A MONOMERIC JRNL TITL 2 REPRESENTATIVE OF THE CC CHEMOKINE SUBTYPE. JRNL REF BIOCHEMISTRY V. 38 5995 1999 JRNL REFN ISSN 0006-2960 JRNL PMID 10320325 JRNL DOI 10.1021/BI990065I REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.PARDIGOL,U.FORSSMANN,H.D.ZUCHT,P.LOETSCHER, REMARK 1 AUTH 2 P.SCHULZ-KNAPPE,M.BAGGIOLINI,W.G.FORSSMANN,H.J.MAGERT REMARK 1 TITL HCC-2, A HUMAN CHEMOKINE: GENE STRUCTURE, EXPRESSION REMARK 1 TITL 2 PATTERN, AND BIOLOGICAL ACTIVITY REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 95 6308 1998 REMARK 1 REFN ISSN 0027-8424 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: EXPERIMENTAL RESTRAINTS FOR THE REMARK 3 STRUCTURE: REMARK 4 REMARK 4 2HCC COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000178174. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 3.0 REMARK 210 IONIC STRENGTH : 0MM REMARK 210 PRESSURE : 10E+5 PA ATM REMARK 210 SAMPLE CONTENTS : H2O/D2O(9:1) OR D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : TWO-DIMENSIONAL 1H-1H REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 400 MHZ REMARK 210 SPECTROMETER MODEL : DRX600; AMX400 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NDEE, X-PLOR REMARK 210 METHOD USED : SIMULATED ANNEALING, RESTRAINED REMARK 210 MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : ENERGY, AGREEMENT WITH REMARK 210 EXPERIMENTAL DATA REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 9 143.89 -171.90 REMARK 500 1 SER A 18 3.31 -68.93 REMARK 500 1 TYR A 64 45.46 -151.83 REMARK 500 2 ALA A 4 -91.96 46.02 REMARK 500 2 ASP A 5 101.17 -174.53 REMARK 500 2 SER A 50 43.52 -141.93 REMARK 500 2 LYS A 62 89.09 -159.88 REMARK 500 2 TYR A 64 26.63 -148.12 REMARK 500 2 SER A 65 103.32 59.38 REMARK 500 3 ALA A 3 -178.32 -63.05 REMARK 500 3 SER A 22 117.85 -163.08 REMARK 500 3 PRO A 33 -169.85 -72.25 REMARK 500 3 PRO A 52 87.56 -67.43 REMARK 500 3 TYR A 64 47.37 179.19 REMARK 500 3 SER A 65 142.75 64.23 REMARK 500 4 SER A 9 -151.69 -151.50 REMARK 500 4 SER A 22 115.44 -161.23 REMARK 500 4 PRO A 52 82.78 -68.98 REMARK 500 5 PHE A 2 58.28 -164.97 REMARK 500 5 ASP A 5 104.60 -57.38 REMARK 500 5 PRO A 52 90.58 -68.84 REMARK 500 5 TYR A 64 62.43 -162.41 REMARK 500 5 SER A 65 166.87 56.34 REMARK 500 6 ALA A 3 -159.05 -146.34 REMARK 500 6 PRO A 52 96.14 -68.99 REMARK 500 7 ALA A 3 -140.21 52.35 REMARK 500 7 ALA A 4 153.68 67.65 REMARK 500 7 ASP A 5 112.13 -175.27 REMARK 500 7 TYR A 64 61.90 -173.17 REMARK 500 8 ALA A 4 -159.66 55.83 REMARK 500 8 THR A 26 -170.70 -65.37 REMARK 500 9 ALA A 3 -37.61 -164.48 REMARK 500 9 SER A 9 -157.18 -137.64 REMARK 500 9 ILE A 11 176.95 -47.24 REMARK 500 9 THR A 26 -168.38 -74.37 REMARK 500 9 PRO A 52 82.96 -69.83 REMARK 500 9 TYR A 64 54.16 -175.69 REMARK 500 10 ASP A 5 87.01 -150.14 REMARK 500 10 SER A 9 133.38 -175.49 REMARK 500 10 ILE A 11 175.28 -51.42 REMARK 500 11 PHE A 2 88.08 -162.16 REMARK 500 11 SER A 9 -152.40 -158.00 REMARK 500 11 SER A 18 6.80 -69.68 REMARK 500 11 PRO A 33 -163.47 -73.07 REMARK 500 11 TYR A 64 31.41 -144.28 REMARK 500 12 ALA A 3 -145.43 -108.45 REMARK 500 12 ILE A 11 -176.73 -53.43 REMARK 500 12 PRO A 52 94.92 -69.99 REMARK 500 12 TYR A 64 44.58 -170.27 REMARK 500 13 SER A 9 -164.51 -126.65 REMARK 500 REMARK 500 THIS ENTRY HAS 145 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 43 0.32 SIDE CHAIN REMARK 500 2 ARG A 43 0.30 SIDE CHAIN REMARK 500 3 ARG A 43 0.21 SIDE CHAIN REMARK 500 4 ARG A 43 0.20 SIDE CHAIN REMARK 500 5 ARG A 43 0.32 SIDE CHAIN REMARK 500 6 ARG A 43 0.19 SIDE CHAIN REMARK 500 7 ARG A 43 0.30 SIDE CHAIN REMARK 500 8 ARG A 43 0.30 SIDE CHAIN REMARK 500 9 ARG A 43 0.24 SIDE CHAIN REMARK 500 10 ARG A 43 0.30 SIDE CHAIN REMARK 500 11 ARG A 43 0.26 SIDE CHAIN REMARK 500 12 ARG A 43 0.23 SIDE CHAIN REMARK 500 13 ARG A 43 0.18 SIDE CHAIN REMARK 500 14 ARG A 43 0.15 SIDE CHAIN REMARK 500 15 ARG A 43 0.30 SIDE CHAIN REMARK 500 16 ARG A 43 0.30 SIDE CHAIN REMARK 500 17 ARG A 43 0.20 SIDE CHAIN REMARK 500 18 ARG A 43 0.32 SIDE CHAIN REMARK 500 20 ARG A 43 0.21 SIDE CHAIN REMARK 500 22 ARG A 43 0.23 SIDE CHAIN REMARK 500 23 ARG A 43 0.26 SIDE CHAIN REMARK 500 24 ARG A 43 0.21 SIDE CHAIN REMARK 500 25 ARG A 43 0.23 SIDE CHAIN REMARK 500 26 ARG A 43 0.11 SIDE CHAIN REMARK 500 27 ARG A 43 0.31 SIDE CHAIN REMARK 500 28 ARG A 43 0.14 SIDE CHAIN REMARK 500 29 ARG A 43 0.25 SIDE CHAIN REMARK 500 30 ARG A 43 0.28 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 2HCC A 1 66 UNP Q16663 CCL15_HUMAN 48 113 SEQRES 1 A 66 HIS PHE ALA ALA ASP CYS CYS THR SER TYR ILE SER GLN SEQRES 2 A 66 SER ILE PRO CYS SER LEU MET LYS SER TYR PHE GLU THR SEQRES 3 A 66 SER SER GLU CYS SER LYS PRO GLY VAL ILE PHE LEU THR SEQRES 4 A 66 LYS LYS GLY ARG GLN VAL CYS ALA LYS PRO SER GLY PRO SEQRES 5 A 66 GLY VAL GLN ASP CYS MET LYS LYS LEU LYS PRO TYR SER SEQRES 6 A 66 ILE HELIX 1 1 CYS A 17 LEU A 19 5 3 HELIX 2 2 VAL A 54 LYS A 60 1 7 SHEET 1 A 3 ARG A 43 ALA A 47 0 SHEET 2 A 3 VAL A 35 THR A 39 -1 N THR A 39 O ARG A 43 SHEET 3 A 3 MET A 20 GLU A 25 -1 N PHE A 24 O ILE A 36 SSBOND 1 CYS A 6 CYS A 30 1555 1555 2.02 SSBOND 2 CYS A 7 CYS A 46 1555 1555 2.02 SSBOND 3 CYS A 17 CYS A 57 1555 1555 2.01 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000