PDB Short entry for 2HHT
HEADER    TRANSFERASE/DNA                         28-JUN-06   2HHT              
TITLE     C:O6-METHYL-GUANINE PAIR IN THE POLYMERASE-2 BASEPAIR                 
TITLE    2 POSITION                                                             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: 5'-D(*GP*CP*GP*AP*TP*CP*AP*GP*CP*TP*CP*G)-3';              
COMPND   3 CHAIN: B;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 OTHER_DETAILS: DNA PRIMER STRAND;                                    
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: 5'-D(*GP*TP*AP*CP*(6OG)                                    
COMPND   8 P*AP*GP*CP*TP*GP*AP*TP*CP*GP*CP*A)-3';                               
COMPND   9 CHAIN: C;                                                            
COMPND  10 ENGINEERED: YES;                                                     
COMPND  11 OTHER_DETAILS: DNA TEMPLATE STRAND;                                  
COMPND  12 MOL_ID: 3;                                                           
COMPND  13 MOLECULE: DNA POLYMERASE I;                                          
COMPND  14 CHAIN: A;                                                            
COMPND  15 FRAGMENT: RESIDUES 299-876 (ANALOGOUS TO E COLI KLENOW               
COMPND  16 FRAGMENT);                                                           
COMPND  17 EC: 2.7.7.7;                                                         
COMPND  18 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 OTHER_DETAILS: CHEMICALLY SYNTHESIZED;                               
SOURCE   4 MOL_ID: 2;                                                           
SOURCE   5 SYNTHETIC: YES;                                                      
SOURCE   6 OTHER_DETAILS: CHEMICALLY SYNTHESIZED;                               
SOURCE   7 MOL_ID: 3;                                                           
SOURCE   8 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS;                 
SOURCE   9 ORGANISM_TAXID: 1422;                                                
SOURCE  10 GENE: POLA;                                                          
SOURCE  11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;                            
SOURCE  12 EXPRESSION_SYSTEM_TAXID: 511693;                                     
SOURCE  13 EXPRESSION_SYSTEM_STRAIN: BL21;                                      
SOURCE  14 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  15 EXPRESSION_SYSTEM_PLASMID: PUC                                       
KEYWDS    DNA POLYMERASE I, DNA REPLICATION, KLENOW FRAGMENT, PROTEIN-          
KEYWDS   2 DNA COMPLEX, O6-METHYL-GUANINE, TRANSFERASE/DNA COMPLEX              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.J.WARREN,L.J.FORSBERG,L.S.BEESE                                     
REVDAT   3   24-FEB-09 2HHT    1       VERSN                                    
REVDAT   2   16-JAN-07 2HHT    1       JRNL                                     
REVDAT   1   12-DEC-06 2HHT    0                                                
JRNL        AUTH   J.J.WARREN,L.J.FORSBERG,L.S.BEESE                            
JRNL        TITL   THE STRUCTURAL BASIS FOR THE MUTAGENICITY OF                 
JRNL        TITL 2 O6-METHYL-GUANINE LESIONS.                                   
JRNL        REF    PROC.NATL.ACAD.SCI.USA        V. 103 19701 2006              
JRNL        REFN                   ISSN 0027-8424                               
JRNL        PMID   17179038                                                     
JRNL        DOI    10.1073/PNAS.0609580103                                      
REMARK   1                                                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.05 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS                                                  
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,             
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : NULL                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 50.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 90.4                           
REMARK   3   NUMBER OF REFLECTIONS             : 50609                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.197                           
REMARK   3   FREE R VALUE                     : 0.229                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.600                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2575                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.05                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.12                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 55.00                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2424                       
REMARK   3   BIN FREE R VALUE                    : 0.3037                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 157                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 4650                                    
REMARK   3   NUCLEIC ACID ATOMS       : 529                                     
REMARK   3   HETEROGEN ATOMS          : 72                                      
REMARK   3   SOLVENT ATOMS            : 538                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 27.24                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 26.87                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -6.60300                                             
REMARK   3    B22 (A**2) : 3.33600                                              
REMARK   3    B33 (A**2) : 3.26700                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.23                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.18                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.27                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.24                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.006                           
REMARK   3   BOND ANGLES            (DEGREES) : NULL                            
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 22.30                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 0.95                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : ISOTROPIC                                 
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : 50.62                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : CNS_TOPPAR:PROTEIN_REP.PARAM                   
REMARK   3  PARAMETER FILE  2  : CNS_TOPPAR:DNA-RNA-MULTI-ENDO-NEW2.PARAM       
REMARK   3  PARAMETER FILE  3  : CNS_TOPPAR:WATER_REP.PARAM                     
REMARK   3  PARAMETER FILE  4  : CNS_TOPPAR:ION.PARAM                           
REMARK   3  PARAMETER FILE  5  : CNS_TOPPAR:SUCROSE.PAR                         
REMARK   3  PARAMETER FILE  6  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3  TOPOLOGY FILE  2   : NULL                                           
REMARK   3  TOPOLOGY FILE  3   : NULL                                           
REMARK   3  TOPOLOGY FILE  4   : NULL                                           
REMARK   3  TOPOLOGY FILE  5   : NULL                                           
REMARK   3  TOPOLOGY FILE  6   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2HHT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUL-06.                  
REMARK 100 THE RCSB ID CODE IS RCSB038361.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.8                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU RU200                       
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : YALE MIRRORS                       
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : RIGAKU RAXIS IV                    
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 50787                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.050                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 89.8                               
REMARK 200  DATA REDUNDANCY                : 4.300                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.05300                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 20.1500                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.12                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 53.4                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.70                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.22900                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 4.700                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS            
REMARK 200 SOFTWARE USED: CNS                                                   
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 58.33                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 45% SATURATED AMMONIUM SULFATE,          
REMARK 280  2.5% MPD, 100 MM MES, PH 5.8, VAPOR DIFFUSION, HANGING DROP,        
REMARK 280  TEMPERATURE 290K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       43.93200            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       53.53550            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       46.71550            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       53.53550            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       43.93200            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       46.71550            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS ONE BIOLOGICAL ASSEMBLY.        
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, A                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465      DG C     3                                                      
REMARK 465      DT C     4                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER;            
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470      DA C   5    P    OP1  OP2                                       
REMARK 470     LYS A 297    CG   CD   CE   NZ                                   
REMARK 470     LYS A 298    CG   CD   CE   NZ                                   
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LEU A 312       40.31   -109.33                                   
REMARK 500    ASP A 402       92.68   -163.34                                   
REMARK 500    ALA A 421       39.70    -84.94                                   
REMARK 500    LEU A 477      -72.31   -117.74                                   
REMARK 500    THR A 550      -84.33   -127.40                                   
REMARK 500    LYS A 551      -73.18   -154.25                                   
REMARK 500    ILE A 588      -65.33   -106.58                                   
REMARK 500    LEU A 610      -56.13   -129.85                                   
REMARK 500    GLU A 620       63.34     38.09                                   
REMARK 500    ILE A 628      -28.21   -161.01                                   
REMARK 500    HIS A 829      -56.82     68.70                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A2029        DISTANCE =  6.45 ANGSTROMS                       
REMARK 525    HOH A2383        DISTANCE =  7.17 ANGSTROMS                       
REMARK 525    HOH A3071        DISTANCE =  8.07 ANGSTROMS                       
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620  (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;              
REMARK 620  SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                            
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A 920  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 653   OD1                                                    
REMARK 620 2 HOH A2525   O   116.8                                              
REMARK 620 3 ASP A 830   OD2 128.1 102.1                                        
REMARK 620 4 TYR A 654   O    76.9  78.9  78.7                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SUC A 901                 
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SUC A 902                 
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 910                 
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 911                 
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 912                 
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 913                 
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 914                 
REMARK 800 SITE_IDENTIFIER: AC8                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 920                  
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 2HHQ   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 2HHS   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 2HHU   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 2HHV   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 2HHW   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 2HHX   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 2HHY   RELATED DB: PDB                                   
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999                                                                      
REMARK 999 THE DNA POLYMERASE GENE WAS CLONED FROM AN                           
REMARK 999 ORGANISM THAT WAS CLASSIFIED AS A THERMOSTABLE                       
REMARK 999 STRAIN OF BACILLUS STEAROTHERMOPHILUS BY                             
REMARK 999 RIBOSOMAL RNA SEQUENCING.  HOWEVER, THIS                             
REMARK 999 PARTICULAR GENE HAS MUCH GREATER HOMOLOGY WITH                       
REMARK 999 THE ANALOGOUS GENE FROM GEOBACILLUS KAUSTOPHILUS,                    
REMARK 999 UNP ACCESSION, Q5KWC1_GEOKA.                                         
DBREF  2HHT A  298   876  UNP    Q5KWC1   Q5KWC1_GEOKA   300    878             
DBREF  2HHT B   19    30  PDB    2HHT     2HHT            19     30             
DBREF  2HHT C    3    18  PDB    2HHT     2HHT             3     18             
SEQRES   1 B   12   DG  DC  DG  DA  DT  DC  DA  DG  DC  DT  DC  DG              
SEQRES   1 C   16   DG  DT  DA  DC 6OG  DA  DG  DC  DT  DG  DA  DT  DC          
SEQRES   2 C   16   DG  DC  DA                                                  
SEQRES   1 A  580  LYS LYS MET ALA PHE THR LEU ALA ASP ARG VAL THR GLU          
SEQRES   2 A  580  GLU MET LEU ALA ASP LYS ALA ALA LEU VAL VAL GLU VAL          
SEQRES   3 A  580  VAL GLU GLU ASN TYR HIS ASP ALA PRO ILE VAL GLY ILE          
SEQRES   4 A  580  ALA VAL VAL ASN GLU HIS GLY ARG PHE PHE LEU ARG PRO          
SEQRES   5 A  580  GLU THR ALA LEU ALA ASP PRO GLN PHE VAL ALA TRP LEU          
SEQRES   6 A  580  GLY ASP GLU THR LYS LYS LYS SER MET PHE ASP SER LYS          
SEQRES   7 A  580  ARG ALA ALA VAL ALA LEU LYS TRP LYS GLY ILE GLU LEU          
SEQRES   8 A  580  CYS GLY VAL SER PHE ASP LEU LEU LEU ALA ALA TYR LEU          
SEQRES   9 A  580  LEU ASP PRO ALA GLN GLY VAL ASP ASP VAL ALA ALA ALA          
SEQRES  10 A  580  ALA LYS MET LYS GLN TYR GLU ALA VAL ARG PRO ASP GLU          
SEQRES  11 A  580  ALA VAL TYR GLY LYS GLY ALA LYS ARG ALA VAL PRO ASP          
SEQRES  12 A  580  GLU PRO VAL LEU ALA GLU HIS LEU VAL ARG LYS ALA ALA          
SEQRES  13 A  580  ALA ILE TRP GLU LEU GLU ARG PRO PHE LEU ASP GLU LEU          
SEQRES  14 A  580  ARG ARG ASN GLU GLN ASP ARG LEU LEU VAL GLU LEU GLU          
SEQRES  15 A  580  GLN PRO LEU SER SER ILE LEU ALA GLU MET GLU PHE ALA          
SEQRES  16 A  580  GLY VAL LYS VAL ASP THR LYS ARG LEU GLU GLN MET GLY          
SEQRES  17 A  580  LYS GLU LEU ALA GLU GLN LEU GLY THR VAL GLU GLN ARG          
SEQRES  18 A  580  ILE TYR GLU LEU ALA GLY GLN GLU PHE ASN ILE ASN SER          
SEQRES  19 A  580  PRO LYS GLN LEU GLY VAL ILE LEU PHE GLU LYS LEU GLN          
SEQRES  20 A  580  LEU PRO VAL LEU LYS LYS THR LYS THR GLY TYR SER THR          
SEQRES  21 A  580  SER ALA ASP VAL LEU GLU LYS LEU ALA PRO TYR HIS GLU          
SEQRES  22 A  580  ILE VAL GLU ASN ILE LEU HIS TYR ARG GLN LEU GLY LYS          
SEQRES  23 A  580  LEU GLN SER THR TYR ILE GLU GLY LEU LEU LYS VAL VAL          
SEQRES  24 A  580  ARG PRO ASP THR LYS LYS VAL HIS THR ILE PHE ASN GLN          
SEQRES  25 A  580  ALA LEU THR GLN THR GLY ARG LEU SER SER THR GLU PRO          
SEQRES  26 A  580  ASN LEU GLN ASN ILE PRO ILE ARG LEU GLU GLU GLY ARG          
SEQRES  27 A  580  LYS ILE ARG GLN ALA PHE VAL PRO SER GLU SER ASP TRP          
SEQRES  28 A  580  LEU ILE PHE ALA ALA ASP TYR SER GLN ILE GLU LEU ARG          
SEQRES  29 A  580  VAL LEU ALA HIS ILE ALA GLU ASP ASP ASN LEU MET GLU          
SEQRES  30 A  580  ALA PHE ARG ARG ASP LEU ASP ILE HIS THR LYS THR ALA          
SEQRES  31 A  580  MET ASP ILE PHE GLN VAL SER GLU ASP GLU VAL THR PRO          
SEQRES  32 A  580  ASN MET ARG ARG GLN ALA LYS ALA VAL ASN PHE GLY ILE          
SEQRES  33 A  580  VAL TYR GLY ILE SER ASP TYR GLY LEU ALA GLN ASN LEU          
SEQRES  34 A  580  ASN ILE SER ARG LYS GLU ALA ALA GLU PHE ILE GLU ARG          
SEQRES  35 A  580  TYR PHE GLU SER PHE PRO GLY VAL LYS ARG TYR MET GLU          
SEQRES  36 A  580  ASN ILE VAL GLN GLU ALA LYS GLN LYS GLY TYR VAL THR          
SEQRES  37 A  580  THR LEU LEU HIS ARG ARG ARG TYR LEU PRO ASP ILE THR          
SEQRES  38 A  580  SER ARG ASN PHE ASN VAL ARG SER PHE ALA GLU ARG MET          
SEQRES  39 A  580  ALA MET ASN THR PRO ILE GLN GLY SER ALA ALA ASP ILE          
SEQRES  40 A  580  ILE LYS LYS ALA MET ILE ASP LEU ASN ALA ARG LEU LYS          
SEQRES  41 A  580  GLU GLU ARG LEU GLN ALA HIS LEU LEU LEU GLN VAL HIS          
SEQRES  42 A  580  ASP GLU LEU ILE LEU GLU ALA PRO LYS GLU GLU MET GLU          
SEQRES  43 A  580  ARG LEU CYS ARG LEU VAL PRO GLU VAL MET GLU GLN ALA          
SEQRES  44 A  580  VAL THR LEU ARG VAL PRO LEU LYS VAL ASP TYR HIS TYR          
SEQRES  45 A  580  GLY SER THR TRP TYR ASP ALA LYS                              
MODRES 2HHT 6OG C    7   DG  6-O-METHYL GUANOSINE-5'-MONOPHOSPHATE              
HET    6OG  C   7      23                                                       
HET    SUC  A 901      23                                                       
HET    SUC  A 902      23                                                       
HET    SO4  A 910       5                                                       
HET    SO4  A 911       5                                                       
HET    SO4  A 912       5                                                       
HET    SO4  A 913       5                                                       
HET    SO4  A 914       5                                                       
HET     MG  A 920       1                                                       
HETNAM     6OG 6-O-METHYL GUANOSINE-5'-MONOPHOSPHATE                            
HETNAM     SUC SUCROSE                                                          
HETNAM     SO4 SULFATE ION                                                      
HETNAM      MG MAGNESIUM ION                                                    
FORMUL   2  6OG    C11 H16 N5 O7 P                                              
FORMUL   4  SUC    2(C12 H22 O11)                                               
FORMUL   6  SO4    5(O4 S 2-)                                                   
FORMUL  11   MG    MG 2+                                                        
FORMUL  12  HOH   *538(H2 O)                                                    
HELIX    1   1 THR A  308  ALA A  313  5                                   6    
HELIX    2   2 ARG A  347  LEU A  352  1                                   6    
HELIX    3   3 ASP A  354  GLY A  362  1                                   9    
HELIX    4   4 ASP A  372  TRP A  382  1                                  11    
HELIX    5   5 LEU A  394  ASP A  402  1                                   9    
HELIX    6   6 PRO A  403  GLY A  406  5                                   4    
HELIX    7   7 ASP A  409  MET A  416  1                                   8    
HELIX    8   8 PRO A  424  GLY A  430  1                                   7    
HELIX    9   9 LYS A  431  ARG A  435  5                                   5    
HELIX   10  10 ASP A  439  ASN A  468  1                                  30    
HELIX   11  11 GLN A  470  GLU A  476  1                                   7    
HELIX   12  12 LEU A  477  GLY A  492  1                                  16    
HELIX   13  13 ASP A  496  GLY A  523  1                                  28    
HELIX   14  14 SER A  530  GLU A  540  1                                  11    
HELIX   15  15 SER A  557  ALA A  565  1                                   9    
HELIX   16  16 GLU A  569  ILE A  588  1                                  20    
HELIX   17  17 ILE A  588  VAL A  595  1                                   8    
HELIX   18  18 LEU A  630  LYS A  635  1                                   6    
HELIX   19  19 ILE A  636  GLN A  638  5                                   3    
HELIX   20  20 GLN A  656  GLU A  667  1                                  12    
HELIX   21  21 ASP A  668  ARG A  677  1                                  10    
HELIX   22  22 ASP A  680  GLN A  691  1                                  12    
HELIX   23  23 SER A  693  VAL A  697  5                                   5    
HELIX   24  24 THR A  698  GLY A  715  1                                  18    
HELIX   25  25 SER A  717  ASN A  726  1                                  10    
HELIX   26  26 SER A  728  PHE A  743  1                                  16    
HELIX   27  27 PHE A  743  GLY A  761  1                                  19    
HELIX   28  28 PRO A  774  SER A  778  5                                   5    
HELIX   29  29 ASN A  780  GLU A  818  1                                  39    
HELIX   30  30 GLU A  840  GLN A  854  1                                  15    
SHEET    1   A 6 THR A 302  LEU A 303  0                                        
SHEET    2   A 6 GLY A 342  LEU A 346  1  O  ARG A 343   N  THR A 302           
SHEET    3   A 6 GLY A 334  ASN A 339 -1  N  VAL A 337   O  PHE A 344           
SHEET    4   A 6 LYS A 315  GLU A 321 -1  N  ALA A 317   O  VAL A 338           
SHEET    5   A 6 LYS A 367  MET A 370  1  O  SER A 369   N  LEU A 318           
SHEET    6   A 6 VAL A 390  ASP A 393  1  O  PHE A 392   N  MET A 370           
SHEET    1   B 3 LYS A 601  VAL A 602  0                                        
SHEET    2   B 3 VAL A 493  VAL A 495 -1  N  VAL A 493   O  VAL A 602           
SHEET    3   B 3 PHE A 640  VAL A 641 -1  O  VAL A 641   N  LYS A 494           
SHEET    1   C 2 ILE A 605  ASN A 607  0                                        
SHEET    2   C 2 SER A 617  THR A 619 -1  O  THR A 619   N  ILE A 605           
SHEET    1   D 4 HIS A 823  GLN A 827  0                                        
SHEET    2   D 4 GLU A 831  PRO A 837 -1  O  ILE A 833   N  LEU A 825           
SHEET    3   D 4 TRP A 647  TYR A 654 -1  N  PHE A 650   O  LEU A 834           
SHEET    4   D 4 VAL A 864  GLY A 869 -1  O  HIS A 867   N  ALA A 651           
SHEET    1   E 2 TYR A 762  THR A 764  0                                        
SHEET    2   E 2 ARG A 770  TYR A 772 -1  O  ARG A 771   N  VAL A 763           
LINK        MG    MG A 920                 OD1 ASP A 653     1555   1555  2.79  
LINK        MG    MG A 920                 O   HOH A2525     1555   1555  3.03  
LINK        MG    MG A 920                 OD2 ASP A 830     1555   1555  2.82  
LINK        MG    MG A 920                 O   TYR A 654     1555   1555  2.82  
LINK         O3'  DC C   6                 P   6OG C   7     1555   1555  1.61  
LINK         O3' 6OG C   7                 P    DA C   8     1555   1555  1.61  
CISPEP   1 GLU A  620    PRO A  621          0         0.00                     
SITE     1 AC1 13 GLU A 325  TYR A 327  ASP A 372  ARG A 375                    
SITE     2 AC1 13 LEU A 395  ASP A 408  ILE A 605  ASN A 607                    
SITE     3 AC1 13 HOH A1031  HOH A1045  HOH A2121  HOH A2268                    
SITE     4 AC1 13 HOH A3198                                                     
SITE     1 AC2 13 GLU A 540  GLN A 543  TYR A 554  GLU A 751                    
SITE     2 AC2 13 LYS A 758  ARG A 784  GLU A 788  HOH A2619                    
SITE     3 AC2 13 HOH A2646  HOH A2810  HOH A2819  HOH A2892                    
SITE     4 AC2 13 HOH A3254                                                     
SITE     1 AC3  4 HIS A 682  ARG A 702  LYS A 706  HOH A2816                    
SITE     1 AC4  4 ARG A 779  ARG A 819  HOH A2743  HOH A3222                    
SITE     1 AC5  4 MET A 299  ALA A 300  ARG A 343  ARG A 677                    
SITE     1 AC6  4 SER A 645  SER A 728  ARG A 729  HOH A2823                    
SITE     1 AC7  2 ILE A 716  ILE A 736                                          
SITE     1 AC8  4 ASP A 653  TYR A 654  ASP A 830  HOH A2525                    
CRYST1   87.864   93.431  107.071  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.011381  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.010703  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.009340        0.00000