PDB Short entry for 2HUE HEADER DNA BINDING PROTEIN 26-JUL-06 2HUE TITLE STRUCTURE OF THE H3-H4 CHAPERONE ASF1 BOUND TO HISTONES H3 AND H4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-SILENCING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 2-169; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HISTONE H3; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: RESIDUES 62-136; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: HISTONE H4; COMPND 14 CHAIN: C; COMPND 15 FRAGMENT: RESIDUES 20-102; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: ASF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA DE3 PLYS S; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PST39; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 13 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 14 ORGANISM_TAXID: 8355; SOURCE 15 GENE: H3L; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: ROSETTA DE3 PLYS S; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PST39; SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 23 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 24 ORGANISM_TAXID: 8355; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 27 EXPRESSION_SYSTEM_STRAIN: ROSETTA DE3 PLYS S; SOURCE 28 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 29 EXPRESSION_SYSTEM_PLASMID: PST39 KEYWDS MINI BETA SHEET, ELONGATED BETA SANDWHICH, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.M.ENGLISH,M.E.A.CHURCHILL,J.K.TYLER REVDAT 6 14-FEB-24 2HUE 1 REMARK REVDAT 5 20-OCT-21 2HUE 1 REMARK SEQADV LINK REVDAT 4 24-JAN-18 2HUE 1 AUTHOR REVDAT 3 13-JUL-11 2HUE 1 VERSN REVDAT 2 24-FEB-09 2HUE 1 VERSN REVDAT 1 21-NOV-06 2HUE 0 JRNL AUTH C.M.ENGLISH,M.W.ADKINS,J.J.CARSON,M.E.CHURCHILL,J.K.TYLER JRNL TITL STRUCTURAL BASIS FOR THE HISTONE CHAPERONE ACTIVITY OF ASF1. JRNL REF CELL(CAMBRIDGE,MASS.) V. 127 495 2006 JRNL REFN ISSN 0092-8674 JRNL PMID 17081973 JRNL DOI 10.1016/J.CELL.2006.08.047 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 11.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 61200 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2560 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 367 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2HUE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038772. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 295 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000, 1.23 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61200 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 12.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M POTASSIUM SULFATE, 0.1M TRIS-HCL, REMARK 280 14.5% PEG 4K, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.89200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 73.78400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 73.78400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.89200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -271.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -36.89200 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -185.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 -0.500000 -0.866025 0.000000 -47.87450 REMARK 350 BIOMT2 1 0.866025 -0.500000 0.000000 82.92107 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 -73.78400 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -47.87450 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 -82.92107 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 36.89200 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -36.89200 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -233.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 -0.500000 0.866025 0.000000 -95.74900 REMARK 350 BIOMT2 1 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 73.78400 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -95.74900 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 36.89200 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 -143.62350 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 82.92107 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 110.67600 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A -5 REMARK 465 LEU A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 PRO A -1 REMARK 465 ASN A 0 REMARK 465 GLU A 165 REMARK 465 GLN A 166 REMARK 465 PRO A 167 REMARK 465 GLY A 168 REMARK 465 VAL A 169 REMARK 465 MET B 59 REMARK 465 ALA B 135 REMARK 465 MET C 19 REMARK 465 GLY C 102 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 156 CG CD OE1 OE2 REMARK 470 ARG B 134 CG CD NE CZ NH1 NH2 REMARK 470 TYR C 98 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU B 133 O HOH B 458 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 632 O HOH B 423 2565 0.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 39 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 81 72.96 42.33 REMARK 500 GLU B 133 -151.25 52.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 134 NE2 REMARK 620 2 HIS A 134 NE2 108.6 REMARK 620 3 HOH A 558 O 119.9 117.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KX5 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE, NCP147, AT 1.9 A REMARK 900 RESOLUTION REMARK 900 RELATED ID: 1ROC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HISTONE DEPOSITION PROTEIN ASF1 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AN ALA AT POSITION 102 AGREES WITH THE DATABASE REFERENCE REMARK 999 GB P84233 DBREF 2HUE A 2 169 UNP P32447 ASF1_YEAST 2 169 DBREF 2HUE B 61 135 UNP Q92133 Q92133_XENLA 62 136 DBREF 2HUE C 20 102 UNP P62799 H4_XENLA 20 102 SEQADV 2HUE PRO A -5 UNP P32447 CLONING ARTIFACT SEQADV 2HUE LEU A -4 UNP P32447 CLONING ARTIFACT SEQADV 2HUE GLY A -3 UNP P32447 CLONING ARTIFACT SEQADV 2HUE SER A -2 UNP P32447 CLONING ARTIFACT SEQADV 2HUE PRO A -1 UNP P32447 CLONING ARTIFACT SEQADV 2HUE ASN A 0 UNP P32447 CLONING ARTIFACT SEQADV 2HUE SER A 1 UNP P32447 CLONING ARTIFACT SEQADV 2HUE MET B 59 UNP Q92133 INITIATING METHIONINE SEQADV 2HUE ALA B 60 UNP Q92133 CLONING ARTIFACT SEQADV 2HUE ALA B 102 UNP Q92133 GLY 103 ENGINEERED MUTATION SEQADV 2HUE ALA B 111 UNP Q92133 GLY 112 SEE REMARK 999 SEQADV 2HUE MET C 19 UNP P62799 INITIATING METHIONINE SEQRES 1 A 175 PRO LEU GLY SER PRO ASN SER SER ILE VAL SER LEU LEU SEQRES 2 A 175 GLY ILE LYS VAL LEU ASN ASN PRO ALA LYS PHE THR ASP SEQRES 3 A 175 PRO TYR GLU PHE GLU ILE THR PHE GLU CYS LEU GLU SER SEQRES 4 A 175 LEU LYS HIS ASP LEU GLU TRP LYS LEU THR TYR VAL GLY SEQRES 5 A 175 SER SER ARG SER LEU ASP HIS ASP GLN GLU LEU ASP SER SEQRES 6 A 175 ILE LEU VAL GLY PRO VAL PRO VAL GLY VAL ASN LYS PHE SEQRES 7 A 175 VAL PHE SER ALA ASP PRO PRO SER ALA GLU LEU ILE PRO SEQRES 8 A 175 ALA SER GLU LEU VAL SER VAL THR VAL ILE LEU LEU SER SEQRES 9 A 175 CYS SER TYR ASP GLY ARG GLU PHE VAL ARG VAL GLY TYR SEQRES 10 A 175 TYR VAL ASN ASN GLU TYR ASP GLU GLU GLU LEU ARG GLU SEQRES 11 A 175 ASN PRO PRO ALA LYS VAL GLN VAL ASP HIS ILE VAL ARG SEQRES 12 A 175 ASN ILE LEU ALA GLU LYS PRO ARG VAL THR ARG PHE ASN SEQRES 13 A 175 ILE VAL TRP ASP ASN GLU ASN GLU GLY ASP LEU TYR PRO SEQRES 14 A 175 PRO GLU GLN PRO GLY VAL SEQRES 1 B 77 MET ALA LEU ILE ARG LYS LEU PRO PHE GLN ARG LEU VAL SEQRES 2 B 77 ARG GLU ILE ALA GLN ASP PHE LYS THR ASP LEU ARG PHE SEQRES 3 B 77 GLN SER SER ALA VAL MET ALA LEU GLN GLU ALA SER GLU SEQRES 4 B 77 ALA TYR LEU VAL ALA LEU PHE GLU ASP THR ASN LEU CYS SEQRES 5 B 77 ALA ILE HIS ALA LYS ARG VAL THR ILE MET PRO LYS ASP SEQRES 6 B 77 ILE GLN LEU ALA ARG ARG ILE ARG GLY GLU ARG ALA SEQRES 1 C 84 MET LYS VAL LEU ARG ASP ASN ILE GLN GLY ILE THR LYS SEQRES 2 C 84 PRO ALA ILE ARG ARG LEU ALA ARG ARG GLY GLY VAL LYS SEQRES 3 C 84 ARG ILE SER GLY LEU ILE TYR GLU GLU THR ARG GLY VAL SEQRES 4 C 84 LEU LYS VAL PHE LEU GLU ASN VAL ILE ARG ASP ALA VAL SEQRES 5 C 84 THR TYR THR GLU HIS ALA LYS ARG LYS THR VAL THR ALA SEQRES 6 C 84 MET ASP VAL VAL TYR ALA LEU LYS ARG GLN GLY ARG THR SEQRES 7 C 84 LEU TYR GLY PHE GLY GLY HET ZN A 403 1 HET GOL A 501 6 HET SO4 B 401 5 HET SO4 B 402 5 HET GOL C 502 6 HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 ZN ZN 2+ FORMUL 5 GOL 2(C3 H8 O3) FORMUL 6 SO4 2(O4 S 2-) FORMUL 9 HOH *367(H2 O) HELIX 1 1 SER A 50 ASP A 52 5 3 HELIX 2 2 SER A 80 ILE A 84 5 5 HELIX 3 3 PRO A 85 VAL A 90 1 6 HELIX 4 4 GLU A 119 ASN A 125 1 7 HELIX 5 5 GLN A 131 ASP A 133 5 3 HELIX 6 6 ARG B 63 ASP B 77 1 15 HELIX 7 7 GLN B 85 ALA B 114 1 30 HELIX 8 8 MET B 120 ARG B 131 1 12 HELIX 9 9 VAL C 21 ILE C 26 5 6 HELIX 10 10 THR C 30 GLY C 41 1 12 HELIX 11 11 LEU C 49 ALA C 76 1 28 HELIX 12 12 THR C 82 LEU C 90 1 9 SHEET 1 A 3 VAL A 4 VAL A 11 0 SHEET 2 A 3 TYR A 22 CYS A 30 -1 O GLU A 29 N SER A 5 SHEET 3 A 3 GLY A 68 ALA A 76 -1 O ASN A 70 N PHE A 28 SHEET 1 B 6 ALA A 16 LYS A 17 0 SHEET 2 B 6 ILE A 135 ILE A 139 -1 O ARG A 137 N ALA A 16 SHEET 3 B 6 ARG A 104 TYR A 117 -1 N GLU A 116 O VAL A 136 SHEET 4 B 6 THR A 93 TYR A 101 -1 N LEU A 97 O VAL A 109 SHEET 5 B 6 LEU A 38 VAL A 45 -1 N THR A 43 O LEU A 96 SHEET 6 B 6 ASP A 54 VAL A 62 -1 O VAL A 62 N LEU A 38 SHEET 1 C 5 ALA A 16 LYS A 17 0 SHEET 2 C 5 ILE A 135 ILE A 139 -1 O ARG A 137 N ALA A 16 SHEET 3 C 5 ARG A 104 TYR A 117 -1 N GLU A 116 O VAL A 136 SHEET 4 C 5 ARG A 145 ARG A 148 -1 O ARG A 145 N GLY A 110 SHEET 5 C 5 ARG C 95 TYR C 98 -1 O LEU C 97 N VAL A 146 SHEET 1 D 2 ARG B 83 PHE B 84 0 SHEET 2 D 2 THR C 80 VAL C 81 1 O VAL C 81 N ARG B 83 SHEET 1 E 2 THR B 118 ILE B 119 0 SHEET 2 E 2 ARG C 45 ILE C 46 1 O ARG C 45 N ILE B 119 LINK NE2 HIS A 134 ZN ZN A 403 1555 1555 2.10 LINK NE2 HIS A 134 ZN ZN A 403 5554 1555 2.36 LINK ZN ZN A 403 O HOH A 558 1555 1555 2.20 CISPEP 1 ASN A 14 PRO A 15 0 -2.62 CISPEP 2 GLY A 63 PRO A 64 0 -4.30 SITE 1 AC1 9 ARG B 63 HOH B 426 HOH B 434 HOH B 455 SITE 2 AC1 9 HOH B 467 HOH B 472 THR C 30 PRO C 32 SITE 3 AC1 9 ARG C 36 SITE 1 AC2 8 SER A 91 VAL A 92 GOL A 501 HOH A 568 SITE 2 AC2 8 ARG B 116 LYS B 122 HOH B 439 HOH B 474 SITE 1 AC3 3 ASP A 133 HIS A 134 HOH A 558 SITE 1 AC4 10 VAL A 90 SER A 91 ASN A 114 ASN A 115 SITE 2 AC4 10 GLU A 116 HOH A 568 ALA B 114 LYS B 115 SITE 3 AC4 10 SO4 B 402 HOH B 439 SITE 1 AC5 6 GLU B 73 ASP B 77 ARG C 23 ILE C 26 SITE 2 AC5 6 LYS C 59 HOH C 512 CRYST1 95.749 95.749 110.676 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010444 0.006030 0.000000 0.00000 SCALE2 0.000000 0.012060 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009035 0.00000