PDB Short entry for 2IIL HEADER 28-SEP-06 2IIL TITLE NEUROPEPTIDE Y1 RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEINS: NEUROPEPTIDE Y1 RECEPTOR COMPND 3 TRANSMEMBRANE PROTEIN HOMO SAPIENS; COMPND 4 CHAIN: NULL SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 OTHER_DETAILS: BRAIN KEYWDS HELIX, NEUROPEPTIDE Y1 RECEPTOR, TRANSMEMBRANE PROTEIN, EXPDTA THEORETICAL MODEL AUTHOR PULIPAKA KALYAN CHAITANYA,ANNABHIMOJU RAMAKRISHNA, AUTHOR 2 VURUPUTURI UMA REVDAT 1 10-OCT-06 2IIL 0 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SCHRODINGER SUITE 2005 REMARK 3 AUTHORS : SCHRODINGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT COMPONENT USES IMPACT TO REMARK 3 RUN A SERIES OF RESTRAINED, PARTIAL MINIMIZATIONS ON THE REMARK 3 COMBINED, HYDROGENATED STRUCTURE. MINIMIZATIONS CONTINUE UNTIL REMARK 3 THE AVERAGE RMS DEVIATION OF THE NON-HYDROGEN ATOMS REACHES REMARK 3 THE SPECIFIED LIMIT (0.3 BY DEFAULT). REMARK 4 REMARK 4 2IIL COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY WAS DEPOSITED AT RCSB ON 28-SEP-2006. REMARK 100 THE RCSB ID CODE IS RCSB039615. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: THIS THEORETICAL MODEL ENTRY WAS NOT ANNOTATED AND NOT REMARK 220 VALIDATED BY THE WWPDB STAFF AND THEREFORE MAY NOT REMARK 220 CONFORM TO THE PDB FORMAT. REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 888 REMARK 888 WRITTEN BY MAESTRO (A PRODUCT OF SCHRODINGER, LLC) SEQRES 1 384 MET ASN SER THR LEU PHE SER GLN VAL GLU ASN HIS SER SEQRES 2 384 VAL HIS SER ASN PHE SER GLU LYS ASN ALA GLN LEU LEU SEQRES 3 384 ALA PHE GLU ASN ASP ASP CYS HIS LEU PRO LEU ALA MET SEQRES 4 384 ILE PHE THR LEU ALA LEU ALA TYR GLY ALA VAL ILE ILE SEQRES 5 384 LEU GLY VAL SER GLY ASN LEU ALA LEU ILE ILE ILE ILE SEQRES 6 384 LEU LYS GLN LYS GLU MET ARG ASN VAL THR ASN ILE LEU SEQRES 7 384 ILE VAL ASN LEU SER PHE SER ASP LEU LEU VAL ALA ILE SEQRES 8 384 MET CYS LEU PRO PHE THR PHE VAL TYR THR LEU MET ASP SEQRES 9 384 HIS TRP VAL PHE GLY GLU ALA MET CYS LYS LEU ASN PRO SEQRES 10 384 PHE VAL GLN CYS VAL SER ILE THR VAL SER ILE PHE SER SEQRES 11 384 LEU VAL LEU ILE ALA VAL GLU ARG HIS GLN LEU ILE ILE SEQRES 12 384 ASN PRO ARG GLY TRP ARG PRO ASN ASN ARG HIS ALA TYR SEQRES 13 384 VAL GLY ILE ALA VAL ILE TRP VAL LEU ALA VAL ALA SER SEQRES 14 384 SER LEU PRO PHE LEU ILE TYR GLN VAL MET THR ASP GLU SEQRES 15 384 PRO PHE GLN ASN VAL THR LEU ASP ALA TYR LYS ASP LYS SEQRES 16 384 TYR VAL CYS PHE ASP GLN PHE PRO SER ASP SER HIS ARG SEQRES 17 384 LEU SER TYR THR THR LEU LEU LEU VAL LEU GLN TYR PHE SEQRES 18 384 GLY PRO LEU CYS PHE ILE PHE ILE CYS TYR PHE LYS ILE SEQRES 19 384 TYR ILE ARG LEU LYS ARG ARG ASN ASN MET MET ASP LYS SEQRES 20 384 MET ARG ASP ASN LYS TYR ARG SER SER GLU THR LYS ARG SEQRES 21 384 ILE ASN ILE MET LEU LEU SER ILE VAL VAL ALA PHE ALA SEQRES 22 384 VAL CYS TRP LEU PRO LEU THR ILE PHE ASN THR VAL PHE SEQRES 23 384 ASP TRP ASN HIS GLN ILE ILE ALA THR CYS ASN HIS ASN SEQRES 24 384 LEU LEU PHE LEU LEU CYS HIS LEU THR ALA MET ILE SER SEQRES 25 384 THR CYS VAL ASN PRO ILE PHE TYR GLY PHE LEU ASN LYS SEQRES 26 384 ASN PHE GLN ARG ASP LEU GLN PHE PHE PHE ASN PHE CYS SEQRES 27 384 ASP PHE ARG SER ARG ASP ASP ASP TYR GLU THR ILE ALA SEQRES 28 384 MET SER THR MET HIS THR ASP VAL SER LYS THR SER LEU SEQRES 29 384 LYS GLN ALA SER PRO VAL ALA PHE LYS LYS ILE ASN ASN SEQRES 30 384 ASN ASP ASP ASN GLU LYS ILE HELIX 1 1 LEU 37 GLY 48 1 12 HELIX 2 2 ALA 49 GLN 68 1 20 HELIX 3 3 ASN 73 CYS 93 1 21 HELIX 4 4 CYS 93 ASP 104 1 12 HELIX 5 5 GLY 109 ASN 144 1 36 HELIX 6 6 ASN 151 LEU 171 1 21 HELIX 7 7 PRO 172 TYR 176 5 5 HELIX 8 8 HIS 207 GLN 219 1 13 HELIX 9 9 TYR 220 ARG 237 1 18 HELIX 10 10 LYS 252 ILE 281 1 30 HELIX 11 11 THR 284 HIS 290 1 7 HELIX 12 12 HIS 298 MET 310 1 13 HELIX 13 13 ILE 311 ASN 324 1 14 HELIX 14 14 ARG 329 PHE 337 1 9 SHEET 1 A 2 MET 179 ASP 181 0 SHEET 2 A 2 VAL 187 LEU 189 -1 O THR 188 N THR 180 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000