PDB Short entry for 2IWO HEADER SIGNALING PROTEIN 03-JUL-06 2IWO TITLE 12TH PDZ DOMAIN OF MULTIPLE PDZ DOMAIN PROTEIN MPDZ COMPND MOL_ID: 1; COMPND 2 MOLECULE: MULTIPLE PDZ DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: 12TH PDZ DOMAIN, RESIDUES 1831-1923; COMPND 5 SYNONYM: MULTI PDZ DOMAIN PROTEIN 1, MULTI-PDZ-DOMAIN PROTEIN 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3 ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS SGC, MUPP1, MUPP-1, PDZ DOMAIN, HOST-VIRUS INTERACTION, STRUCTURAL KEYWDS 2 GENOMICS CONSORTIUM, SYNAPTOSOME, TIGHT JUNCTION, ALTERNATIVE KEYWDS 3 SPLICING, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.ELKINS,X.YANG,C.GILEADI,G.SCHOCH,C.JOHANSSON,P.SAVITSKY, AUTHOR 2 G.BERRIDGE,C.E.A.SMEE,A.TURNBULL,A.PIKE,E.PAPAGRIGORIOU,M.SUNDSTROM, AUTHOR 3 A.EDWARDS,C.ARROWSMITH,J.WEIGELT,D.A.DOYLE REVDAT 4 13-DEC-23 2IWO 1 TITLE REVDAT 3 10-OCT-12 2IWO 1 SOURCE KEYWDS JRNL REMARK REVDAT 3 2 1 VERSN FORMUL REVDAT 2 24-FEB-09 2IWO 1 VERSN REVDAT 1 26-JUL-06 2IWO 0 JRNL AUTH J.M.ELKINS,E.PAPAGRIGORIOU,G.BERRIDGE,X.YANG,C.PHILLIPS, JRNL AUTH 2 C.GILEADI,P.SAVITSKY,D.A.DOYLE JRNL TITL STRUCTURE OF PICK1 AND OTHER PDZ DOMAINS OBTAINED WITH THE JRNL TITL 2 HELP OF SELF-BINDING C-TERMINAL EXTENSIONS. JRNL REF PROTEIN SCI. V. 16 683 2007 JRNL REFN ISSN 0961-8368 JRNL PMID 17384233 JRNL DOI 10.1110/PS.062657507 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 20020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1082 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1423 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1344 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 114 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.18000 REMARK 3 B22 (A**2) : -0.33000 REMARK 3 B33 (A**2) : 0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.101 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.929 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1355 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 859 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1834 ; 1.626 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2134 ; 0.921 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 187 ; 5.260 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 40 ;37.413 ;25.500 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 227 ;13.893 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;27.810 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 231 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1510 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 227 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 232 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 831 ; 0.201 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 676 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 750 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 74 ; 0.174 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.225 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 40 ; 0.206 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.150 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 958 ; 4.372 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1504 ; 5.993 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 429 ; 9.047 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 330 ;11.388 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 4 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1808 A 1839 4 REMARK 3 1 B 1808 B 1839 4 REMARK 3 2 A 1844 A 1852 4 REMARK 3 2 B 1844 B 1852 4 REMARK 3 3 A 1860 A 1867 4 REMARK 3 3 B 1860 B 1867 4 REMARK 3 4 A 1876 A 1917 4 REMARK 3 4 B 1876 B 1917 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 748 ; 0.44 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 748 ; 2.00 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2IWO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1290029236. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8983 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21145 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 38.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2FNE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M (NH4)2SO4, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 37.24150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.20150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.24150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.20150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL ASSEMBLY: MONOMERIC IN SOLUTION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1808 REMARK 465 HIS A 1809 REMARK 465 HIS A 1810 REMARK 465 HIS A 1811 REMARK 465 HIS A 1812 REMARK 465 HIS A 1813 REMARK 465 HIS A 1814 REMARK 465 SER A 1815 REMARK 465 SER A 1816 REMARK 465 GLY A 1817 REMARK 465 VAL A 1818 REMARK 465 ASP A 1819 REMARK 465 LEU A 1820 REMARK 465 GLY A 1821 REMARK 465 THR A 1822 REMARK 465 GLU A 1823 REMARK 465 ASN A 1824 REMARK 465 LEU A 1825 REMARK 465 TYR A 1826 REMARK 465 PHE A 1827 REMARK 465 GLN A 1828 REMARK 465 SER A 1829 REMARK 465 MET A 1830 REMARK 465 GLY A 1831 REMARK 465 GLY A 1840 REMARK 465 PRO A 1841 REMARK 465 THR A 1842 REMARK 465 ASP A 1843 REMARK 465 MET B 1808 REMARK 465 HIS B 1809 REMARK 465 HIS B 1810 REMARK 465 HIS B 1811 REMARK 465 HIS B 1812 REMARK 465 HIS B 1813 REMARK 465 HIS B 1814 REMARK 465 SER B 1815 REMARK 465 SER B 1816 REMARK 465 GLY B 1817 REMARK 465 VAL B 1818 REMARK 465 ASP B 1819 REMARK 465 LEU B 1820 REMARK 465 GLY B 1821 REMARK 465 GLY B 1871 REMARK 465 VAL B 1872 REMARK 465 ALA B 1873 REMARK 465 ALA B 1874 REMARK 465 GLN B 1875 REMARK 465 THR B 1876 REMARK 465 GLN B 1877 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1838 CD CE NZ REMARK 470 LYS A1878 CD CE NZ REMARK 470 ARG A1880 CD NE CZ NH1 NH2 REMARK 470 THR B1822 OG1 CG2 REMARK 470 LEU B1825 CG CD1 CD2 REMARK 470 LYS B1838 CD CE NZ REMARK 470 LYS B1878 CG CD CE NZ REMARK 470 LYS B1906 CE NZ REMARK 470 GLU B1913 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2005 O HOH A 2053 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A1913 CD GLU A1913 OE1 0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS B1868 69.91 -156.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FCF RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF THE 7TH PDZ DOMAIN OF MPDZ (MUPP-1) REMARK 900 RELATED ID: 2FNE RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF THE 13TH PDZ DOMAIN OF MPDZ REMARK 900 RELATED ID: 2IWN RELATED DB: PDB REMARK 900 3RD PDZ DOMAIN OF MULTIPLE PDZ DOMAIN PROTEIN MPDZ (CASP TARGET) REMARK 900 RELATED ID: 2IWP RELATED DB: PDB REMARK 900 12TH PDZ DOMAIN OF MULTIPLE PDZ DOMAIN PROTEIN MPDZ (CASP TARGET) REMARK 900 RELATED ID: 2IWQ RELATED DB: PDB REMARK 900 7TH PDZ DOMAIN OF MULTIPLE PDZ DOMAIN PROTEIN MPDZ DBREF 2IWO A 1808 1830 PDB 2IWO 2IWO 1808 1830 DBREF 2IWO A 1831 1923 UNP O75970 MPDZ_HUMAN 1831 1923 DBREF 2IWO A 1924 1927 PDB 2IWO 2IWO 1924 1927 DBREF 2IWO B 1808 1830 PDB 2IWO 2IWO 1808 1830 DBREF 2IWO B 1831 1923 UNP O75970 MPDZ_HUMAN 1831 1923 DBREF 2IWO B 1924 1927 PDB 2IWO 2IWO 1924 1927 SEQRES 1 A 120 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 120 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLY LEU ARG SEQRES 3 A 120 THR VAL GLU MET LYS LYS GLY PRO THR ASP SER LEU GLY SEQRES 4 A 120 ILE SER ILE ALA GLY GLY VAL GLY SER PRO LEU GLY ASP SEQRES 5 A 120 VAL PRO ILE PHE ILE ALA MET MET HIS PRO THR GLY VAL SEQRES 6 A 120 ALA ALA GLN THR GLN LYS LEU ARG VAL GLY ASP ARG ILE SEQRES 7 A 120 VAL THR ILE CYS GLY THR SER THR GLU GLY MET THR HIS SEQRES 8 A 120 THR GLN ALA VAL ASN LEU LEU LYS ASN ALA SER GLY SER SEQRES 9 A 120 ILE GLU MET GLN VAL VAL ALA GLY GLY ASP VAL SER GLU SEQRES 10 A 120 THR SER VAL SEQRES 1 B 120 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 120 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLY LEU ARG SEQRES 3 B 120 THR VAL GLU MET LYS LYS GLY PRO THR ASP SER LEU GLY SEQRES 4 B 120 ILE SER ILE ALA GLY GLY VAL GLY SER PRO LEU GLY ASP SEQRES 5 B 120 VAL PRO ILE PHE ILE ALA MET MET HIS PRO THR GLY VAL SEQRES 6 B 120 ALA ALA GLN THR GLN LYS LEU ARG VAL GLY ASP ARG ILE SEQRES 7 B 120 VAL THR ILE CYS GLY THR SER THR GLU GLY MET THR HIS SEQRES 8 B 120 THR GLN ALA VAL ASN LEU LEU LYS ASN ALA SER GLY SER SEQRES 9 B 120 ILE GLU MET GLN VAL VAL ALA GLY GLY ASP VAL SER GLU SEQRES 10 B 120 THR SER VAL FORMUL 3 HOH *114(H2 O) HELIX 1 1 GLY A 1871 GLN A 1877 1 7 HELIX 2 2 THR A 1897 ALA A 1908 1 12 HELIX 3 3 THR B 1822 MET B 1830 1 9 HELIX 4 4 THR B 1897 ALA B 1908 1 12 SHEET 1 AA 4 ARG A1833 LYS A1838 0 SHEET 2 AA 4 SER A1911 VAL A1917 -1 O ILE A1912 N MET A1837 SHEET 3 AA 4 ARG A1884 ILE A1888 -1 O ARG A1884 N VAL A1917 SHEET 4 AA 4 THR A1891 SER A1892 -1 O THR A1891 N ILE A1888 SHEET 1 AB 2 ILE A1847 SER A1855 0 SHEET 2 AB 2 GLY A1858 MET A1867 -1 O GLY A1858 N SER A1855 SHEET 1 BA 4 ARG B1833 MET B1837 0 SHEET 2 BA 4 ILE B1912 VAL B1917 -1 O ILE B1912 N MET B1837 SHEET 3 BA 4 ARG B1884 ILE B1888 -1 O ARG B1884 N VAL B1917 SHEET 4 BA 4 THR B1891 SER B1892 -1 O THR B1891 N ILE B1888 SHEET 1 BB 2 ILE B1847 SER B1855 0 SHEET 2 BB 2 GLY B1858 MET B1867 -1 N GLY B1858 O SER B1855 CRYST1 74.483 76.403 32.629 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013426 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013088 0.000000 0.00000 SCALE3 0.000000 0.000000 0.030648 0.00000 MTRIX1 1 0.722190 -0.107910 -0.683230 17.98562 1 MTRIX2 1 -0.124420 -0.991910 0.025150 62.46926 1 MTRIX3 1 -0.680420 0.066850 -0.729770 35.07616 1