PDB Short entry for 2J1I
HEADER    TRANSPORT PROTEIN                       11-AUG-06   2J1I              
TITLE     THE TRANSMEMBRANE DOMAIN OF PHOSPHOLEMMAN (FXYD1)                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PHOSPHOLEMMAN;                                             
COMPND   3 SYNONYM: FXYD DOMAIN-CONTAINING ION TRANSPORT REGULATOR 1;           
COMPND   4 CHAIN: A, B, C, D;                                                   
COMPND   5 FRAGMENT: TRANSMEMBRANE FRAGMENT, RESIDUES 32-59;                    
COMPND   6 OTHER_DETAILS: SYNTHETIC PEPTIDE, NON-COVALENTLY                     
COMPND   7  ASSOCIATED TRANSMEMBRANE PEPTIDE TETRAMER                           
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   4 ORGANISM_COMMON: HUMAN;                                              
SOURCE   5 OTHER_DETAILS: SYNTHETIC TRANSMEMBRANE PEPTIDE                       
KEYWDS    CHLORIDE CHANNEL, TRANSMEMBRANE PEPTIDE,                              
KEYWDS   2 ALPHA-HELIX, IONIC CHANNEL, NA+/K+ ATPASE,                           
KEYWDS   3 MEMBRANE, CHLORIDE, TETRAMER, TRANSPORT, ION CHANNEL,                
KEYWDS   4 ION TRANSPORT, TRANSMEMBRANE, PHOSPHORYLATION,                       
KEYWDS   5 TRANSPORT PROTEIN                                                    
EXPDTA    THEORETICAL MODEL                                                     
AUTHOR    A.J.BEEVERS,A.KUKOL                                                   
REVDAT   2   13-NOV-07 2J1I    1       JRNL                                     
REVDAT   1   09-OCT-07 2J1I    0                                                
JRNL        AUTH   A.J.BEEVERS,A.KUKOL                                          
JRNL        TITL   PHOSPHOLEMMAN TRANSMEMBRANE STRUCTURE REVEALS                
JRNL        TITL 2 POTENTIAL INTERACTIONS WITH NA+/K+-ATPASE.                   
JRNL        REF    J.BIOL.CHEM.                  V. 282 32742 2007              
JRNL        REFN   ASTM JBCHA3  US ISSN 0021-9258                               
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : GROMACS                                              
REMARK   3   AUTHORS     : LINDAHL, HESS, VAN DER SPOEL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 876                                     
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 0                                       
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND           
REMARK   3   IN THE CITATION ABOVE.                                             
REMARK   4                                                                      
REMARK   4 2J1I COMPLIES WITH FORMAT V. 3.1, 01-AUG-2007                        
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY EBI  ON 14-AUG-2006.                
REMARK 100 THE EBI ID CODE IS EBI-29665.                                        
REMARK 220                                                                      
REMARK 220 EXPERIMENTAL DETAILS                                                 
REMARK 220  EXPERIMENT TYPE                : THEORETICAL MODELLING              
REMARK 220                                                                      
REMARK 220 REMARK: MODEL BASED ON SYSTEMATIC CONFORMATIONAL SEARCH OF           
REMARK 220  HELIX-HELIX INTERACTION INCLUDING SHORT MOLECULAR DYNAMICS          
REMARK 220  SIMULATION WITH ORIENTATIONAL CONSTRAINTS FROM SITE-                
REMARK 220  SPECIFIC INFRARED DICHROISM EXPERIMENTS.                            
REMARK 225                                                                      
REMARK 225 THEORETICAL MODEL                                                    
REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE.           
REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND                
REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE                   
REMARK 225 RECORDS ARE MEANINGLESS.                                             
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2, 3, 4                                              
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM                   
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY.  THE REMARK ALSO PROVIDES INFORMATION ON                 
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 300                                                                      
REMARK 300 DETAILS:SEE REMARK 350 FOR THE AUTHOR PROVIDED AND                   
REMARK 300  PROGRAMGENERATED ASSEMBLY INFORMATION FOR THE                       
REMARK 300 STRUCTURE INTHIS ENTRY.  THE REMARK ALSO PROVIDES                    
REMARK 300 INFORMATION ONBURIED SURFACE AREA.                                   
REMARK 350                                                                      
REMARK 350 GENERATING THE BIOMOLECULE                                           
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.                                                         
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT:                                   
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE:                            
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT:                                   
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE:                            
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350 BIOMOLECULE: 3                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT:                                   
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE:                            
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350 BIOMOLECULE: 4                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT:                                   
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE:                            
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 APPLY THE FOLLOWING TO CHAINS: D                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1999                                
REMARK 500 EXPECTED VALUES NUCELIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG B  52   NE  -  CZ  -  NH1 ANGL. DEV. =   3.0 DEGREES          
REMARK 500    ARG B  52   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.7 DEGREES          
REMARK 500    TYR D  27   CB  -  CG  -  CD2 ANGL. DEV. =  -4.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LEU A  35      -79.94      1.27                                   
REMARK 500    PHE A  42        5.42    -64.33                                   
REMARK 500    TYR B  27      -70.56   -131.57                                   
REMARK 500    ILE B  40        4.49    -68.83                                   
REMARK 500    LEU B  44      -58.41     65.64                                   
REMARK 500    VAL C  36      -68.99    -17.00                                   
REMARK 500    ILE C  40       47.06    -92.86                                   
REMARK 500    ILE C  48       46.47    -73.06                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500    TYR A  27         0.10    SIDE CHAIN                              
REMARK 500    TYR D  27         0.12    SIDE CHAIN                              
REMARK 500    ARG D  53         0.09    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY                                       
REMARK 500                                                                      
REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY                       
REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER                       
REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME;                     
REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;                            
REMARK 500 I=INSERTION CODE).                                                   
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        ANGLE                                           
REMARK 500  0 LEU A  35        -10.34                                           
REMARK 500  0 GLY A  39        -13.93                                           
REMARK 500  0 GLY B  34        -15.84                                           
REMARK 500  0 ILE C  40        -14.99                                           
REMARK 500  0 LEU C  41        -11.98                                           
REMARK 500  0 LEU C  44         12.75                                           
REMARK 500  0 GLY C  45        -12.34                                           
REMARK 500  0 ILE C  48        -10.13                                           
REMARK 500  0 LEU D  41        -10.29                                           
REMARK 500  0 LEU D  44        -11.99                                           
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999 RESIDUES 12 TO 39                                                    
DBREF  2J1I A   26    53  UNP    O00168   PLM_HUMAN       32     59             
DBREF  2J1I A   54    54  PDB    2J1I     2J1I            54     54             
DBREF  2J1I B   26    53  UNP    O00168   PLM_HUMAN       32     59             
DBREF  2J1I B   54    54  PDB    2J1I     2J1I            54     54             
DBREF  2J1I C   26    53  UNP    O00168   PLM_HUMAN       32     59             
DBREF  2J1I C   54    54  PDB    2J1I     2J1I            54     54             
DBREF  2J1I D   26    53  UNP    O00168   PLM_HUMAN       32     59             
DBREF  2J1I D   54    54  PDB    2J1I     2J1I            54     54             
SEQRES   1 A   29  ASP TYR GLN SER LEU GLN ILE GLY GLY LEU VAL ILE ALA          
SEQRES   2 A   29  GLY ILE LEU PHE ILE LEU GLY ILE LEU ILE VAL LEU SER          
SEQRES   3 A   29  ARG ARG CYN                                                  
SEQRES   1 B   29  ASP TYR GLN SER LEU GLN ILE GLY GLY LEU VAL ILE ALA          
SEQRES   2 B   29  GLY ILE LEU PHE ILE LEU GLY ILE LEU ILE VAL LEU SER          
SEQRES   3 B   29  ARG ARG CYN                                                  
SEQRES   1 C   29  ASP TYR GLN SER LEU GLN ILE GLY GLY LEU VAL ILE ALA          
SEQRES   2 C   29  GLY ILE LEU PHE ILE LEU GLY ILE LEU ILE VAL LEU SER          
SEQRES   3 C   29  ARG ARG CYN                                                  
SEQRES   1 D   29  ASP TYR GLN SER LEU GLN ILE GLY GLY LEU VAL ILE ALA          
SEQRES   2 D   29  GLY ILE LEU PHE ILE LEU GLY ILE LEU ILE VAL LEU SER          
SEQRES   3 D   29  ARG ARG CYN                                                  
HET    ACE  A  25       3                                                       
HET    ACE  B  25       3                                                       
HET    ACE  C  25       3                                                       
HET    ACE  D  25       3                                                       
HET    CYN  A  54       2                                                       
HET    CYN  B  54       2                                                       
HET    CYN  C  54       2                                                       
HET    CYN  D  54       2                                                       
HETNAM     ACE ACETYL GROUP                                                     
HETNAM     CYN CYANIDE ION                                                      
FORMUL   5  CYN    4(C N 1-)                                                    
FORMUL   6  ACE    4()                                                          
HELIX    1   1 ASP A   26  GLY A   34  1                                   9    
HELIX    2   2 LEU A   35  ALA A   38  5                                   4    
HELIX    3   3 LEU A   41  ILE A   46  1                                   6    
HELIX    4   4 ILE A   46  ARG A   53  1                                   8    
HELIX    5   5 TYR B   27  ALA B   38  1                                  12    
HELIX    6   6 GLY B   39  ILE B   43  5                                   5    
HELIX    7   7 LEU B   47  ARG B   53  1                                   7    
HELIX    8   8 TYR C   27  GLY C   34  1                                   8    
HELIX    9   9 GLY C   34  ILE C   40  1                                   7    
HELIX   10  10 LEU C   41  LEU C   44  5                                   4    
HELIX   11  11 ILE C   48  ARG C   53  1                                   6    
HELIX   12  12 GLN D   28  GLY D   34  1                                   7    
HELIX   13  13 GLY D   34  ILE D   40  1                                   7    
HELIX   14  14 LEU D   41  ILE D   46  1                                   6    
HELIX   15  15 LEU D   47  ARG D   53  1                                   7    
LINK         C   ACE A  25                 N   ASP A  26     1555   1555  1.33  
LINK         C   ARG A  53                 N   CYN A  54     1555   1555  1.34  
LINK         C   ACE B  25                 N   ASP B  26     1555   1555  1.33  
LINK         C   ARG B  53                 N   CYN B  54     1555   1555  1.33  
LINK         C   ACE C  25                 N   ASP C  26     1555   1555  1.33  
LINK         C   ARG C  53                 N   CYN C  54     1555   1555  1.34  
LINK         C   ACE D  25                 N   ASP D  26     1555   1555  1.32  
LINK         C   ARG D  53                 N   CYN D  54     1555   1555  1.33  
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000