PDB Short entry for 2J6K HEADER PROTEIN BINDING 29-SEP-06 2J6K TITLE N-TERMINAL SH3 DOMAIN OF CMS (CD2AP HUMAN HOMOLOG) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CD2-ASSOCIATED PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 4 FRAGMENT: SH3, RESIDUES 1-62; COMPND 5 SYNONYM: CAS LIGAND WITH MULTIPLE SH3 DOMAINS, ADAPTER PROTEIN CMS; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: N-TERMINAL SH3 DOMAIN (SH3A) OF CD2- ASSOCIATED COMPND 8 PROTEIN (CD2AP) OR CAS LIGAND WITH MULTIPLE SRC HOMOLOGY 3 DOMAINS COMPND 9 (CMS) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA (DE3) PLYS; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS PHOSPHORYLATION, ADAPTOR PROTEIN, EGFR DOWNREGULATION, SH3, SH3 KEYWDS 2 DOMAIN, SH3-BINDING, CD2 ASSOCIATED PROTEIN, CYTOSKELETAL KEYWDS 3 REARRANGEMENTS, SURFACE ACTIVE PROTEIN, SIGNALING PROTEIN, PROTEIN KEYWDS 4 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR G.MONCALIAN,N.CARDENES,Y.L.DERIBE,M.SPINOLA-AMILIBIA,I.DIKIC,J.BRAVO REVDAT 5 05-JUL-17 2J6K 1 REMARK REVDAT 4 13-JUL-11 2J6K 1 VERSN REVDAT 3 24-FEB-09 2J6K 1 VERSN REVDAT 2 13-DEC-06 2J6K 1 JRNL REVDAT 1 11-OCT-06 2J6K 0 JRNL AUTH G.MONCALIAN,N.CARDENES,Y.L.DERIBE,M.SPINOLA-AMILIBIA, JRNL AUTH 2 I.DIKIC,J.BRAVO JRNL TITL ATYPICAL POLYPROLINE RECOGNITION BY THE CMS N- TERMINAL SH3 JRNL TITL 2 DOMAIN. JRNL REF J.BIOL.CHEM. V. 281 38845 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 17020880 JRNL DOI 10.1074/JBC.M606411200 REMARK 2 REMARK 2 RESOLUTION. 2.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 94.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 27491 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1385 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 12.31 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 94.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 308 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.4020 REMARK 3 BIN FREE R VALUE SET COUNT : 17 REMARK 3 BIN FREE R VALUE : 0.4650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5712 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 95 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 62.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.46800 REMARK 3 B22 (A**2) : -0.46800 REMARK 3 B33 (A**2) : 0.93500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.887 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.367 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.277 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.857 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.910 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.853 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5894 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7948 ; 1.465 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 695 ; 5.473 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 360 ;31.808 ;24.889 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1099 ;18.522 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 49 ;13.133 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 828 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4589 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2382 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3900 ; 0.324 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 205 ; 0.143 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 167 ; 0.223 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 40 ; 0.205 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3396 ; 0.312 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5496 ; 0.733 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2592 ; 1.629 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2440 ; 2.719 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B E F K L REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 60 3 REMARK 3 1 B 1 B 60 3 REMARK 3 1 E 1 E 60 3 REMARK 3 1 F 1 F 60 3 REMARK 3 1 K 1 K 60 3 REMARK 3 1 L 1 L 60 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 223 ; 0.08 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 223 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 E (A): 223 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 F (A): 223 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 K (A): 223 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 L (A): 223 ; 0.05 ; 0.05 REMARK 3 LOOSE POSITIONAL 1 A (A): 223 ; 0.63 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 B (A): 223 ; 0.43 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 E (A): 223 ; 0.41 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 F (A): 223 ; 0.42 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 K (A): 223 ; 0.38 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 L (A): 223 ; 0.46 ; 5.00 REMARK 3 TIGHT THERMAL 1 A (A**2): 223 ; 0.12 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 223 ; 0.09 ; 0.50 REMARK 3 TIGHT THERMAL 1 E (A**2): 223 ; 0.10 ; 0.50 REMARK 3 TIGHT THERMAL 1 F (A**2): 223 ; 0.09 ; 0.50 REMARK 3 TIGHT THERMAL 1 K (A**2): 223 ; 0.09 ; 0.50 REMARK 3 TIGHT THERMAL 1 L (A**2): 223 ; 0.08 ; 0.50 REMARK 3 LOOSE THERMAL 1 A (A**2): 223 ; 2.10 ; 10.00 REMARK 3 LOOSE THERMAL 1 B (A**2): 223 ; 2.16 ; 10.00 REMARK 3 LOOSE THERMAL 1 E (A**2): 223 ; 1.60 ; 10.00 REMARK 3 LOOSE THERMAL 1 F (A**2): 223 ; 2.01 ; 10.00 REMARK 3 LOOSE THERMAL 1 K (A**2): 223 ; 2.27 ; 10.00 REMARK 3 LOOSE THERMAL 1 L (A**2): 223 ; 1.61 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : C D G H I J REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 C 1 C 60 3 REMARK 3 1 D 1 D 60 3 REMARK 3 1 G 1 G 60 3 REMARK 3 1 H 1 H 60 3 REMARK 3 1 I 1 I 60 3 REMARK 3 1 J 1 J 60 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 C (A): 221 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 D (A): 221 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 G (A): 221 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 H (A): 221 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 I (A): 221 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 J (A): 221 ; 0.06 ; 0.05 REMARK 3 LOOSE POSITIONAL 2 C (A): 213 ; 0.60 ; 5.00 REMARK 3 LOOSE POSITIONAL 2 D (A): 213 ; 0.50 ; 5.00 REMARK 3 LOOSE POSITIONAL 2 G (A): 213 ; 0.81 ; 5.00 REMARK 3 LOOSE POSITIONAL 2 H (A): 213 ; 0.37 ; 5.00 REMARK 3 LOOSE POSITIONAL 2 I (A): 213 ; 0.47 ; 5.00 REMARK 3 LOOSE POSITIONAL 2 J (A): 213 ; 0.49 ; 5.00 REMARK 3 TIGHT THERMAL 2 C (A**2): 221 ; 0.11 ; 0.50 REMARK 3 TIGHT THERMAL 2 D (A**2): 221 ; 0.10 ; 0.50 REMARK 3 TIGHT THERMAL 2 G (A**2): 221 ; 0.08 ; 0.50 REMARK 3 TIGHT THERMAL 2 H (A**2): 221 ; 0.09 ; 0.50 REMARK 3 TIGHT THERMAL 2 I (A**2): 221 ; 0.08 ; 0.50 REMARK 3 TIGHT THERMAL 2 J (A**2): 221 ; 0.09 ; 0.50 REMARK 3 LOOSE THERMAL 2 C (A**2): 213 ; 2.09 ; 10.00 REMARK 3 LOOSE THERMAL 2 D (A**2): 213 ; 1.86 ; 10.00 REMARK 3 LOOSE THERMAL 2 G (A**2): 213 ; 1.74 ; 10.00 REMARK 3 LOOSE THERMAL 2 H (A**2): 213 ; 1.93 ; 10.00 REMARK 3 LOOSE THERMAL 2 I (A**2): 213 ; 1.64 ; 10.00 REMARK 3 LOOSE THERMAL 2 J (A**2): 213 ; 1.89 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 58 REMARK 3 ORIGIN FOR THE GROUP (A): 48.5971 48.3474 1.1372 REMARK 3 T TENSOR REMARK 3 T11: -0.1621 T22: -0.1949 REMARK 3 T33: -0.1651 T12: 0.0072 REMARK 3 T13: -0.0188 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 4.2103 L22: 2.6966 REMARK 3 L33: 4.8675 L12: -0.3700 REMARK 3 L13: -2.4187 L23: -0.4828 REMARK 3 S TENSOR REMARK 3 S11: -0.1430 S12: -0.3273 S13: -0.1286 REMARK 3 S21: 0.2082 S22: 0.1006 S23: -0.0957 REMARK 3 S31: 0.2231 S32: 0.0257 S33: 0.0424 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 58 REMARK 3 ORIGIN FOR THE GROUP (A): 48.0745 48.4468 -23.4999 REMARK 3 T TENSOR REMARK 3 T11: -0.1673 T22: -0.1031 REMARK 3 T33: -0.1790 T12: -0.0262 REMARK 3 T13: -0.0156 T23: -0.0377 REMARK 3 L TENSOR REMARK 3 L11: 4.3326 L22: 5.5161 REMARK 3 L33: 6.9256 L12: -0.4857 REMARK 3 L13: 0.0940 L23: 1.3375 REMARK 3 S TENSOR REMARK 3 S11: -0.1197 S12: 0.3366 S13: -0.0573 REMARK 3 S21: -0.3584 S22: 0.0734 S23: 0.0269 REMARK 3 S31: 0.0711 S32: -0.4821 S33: 0.0462 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 58 REMARK 3 ORIGIN FOR THE GROUP (A): -23.9334 18.9935 9.0316 REMARK 3 T TENSOR REMARK 3 T11: -0.1603 T22: -0.1049 REMARK 3 T33: -0.1422 T12: 0.0404 REMARK 3 T13: 0.0225 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 4.2715 L22: 9.0289 REMARK 3 L33: 6.7386 L12: 0.2461 REMARK 3 L13: 0.2389 L23: 1.3874 REMARK 3 S TENSOR REMARK 3 S11: -0.1843 S12: 0.3572 S13: -0.0097 REMARK 3 S21: 0.0268 S22: 0.0437 S23: -0.4319 REMARK 3 S31: 0.2403 S32: 0.3852 S33: 0.1406 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 58 REMARK 3 ORIGIN FOR THE GROUP (A): -45.8755 29.8072 8.0248 REMARK 3 T TENSOR REMARK 3 T11: -0.1586 T22: -0.1264 REMARK 3 T33: -0.1354 T12: -0.0273 REMARK 3 T13: -0.0113 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 2.2137 L22: 7.0740 REMARK 3 L33: 4.1734 L12: -0.1372 REMARK 3 L13: 0.3375 L23: -0.4844 REMARK 3 S TENSOR REMARK 3 S11: -0.0084 S12: 0.1711 S13: -0.2286 REMARK 3 S21: -0.2639 S22: -0.0938 S23: 0.3349 REMARK 3 S31: 0.2671 S32: -0.4783 S33: 0.1022 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 2 E 58 REMARK 3 ORIGIN FOR THE GROUP (A): 22.3238 17.2553 -47.3331 REMARK 3 T TENSOR REMARK 3 T11: -0.0935 T22: -0.1085 REMARK 3 T33: -0.1882 T12: -0.0331 REMARK 3 T13: 0.0315 T23: -0.0312 REMARK 3 L TENSOR REMARK 3 L11: 7.1933 L22: 7.0892 REMARK 3 L33: 8.7844 L12: 0.1181 REMARK 3 L13: 1.7167 L23: -5.1310 REMARK 3 S TENSOR REMARK 3 S11: 0.0771 S12: -0.1584 S13: -0.0277 REMARK 3 S21: 0.1553 S22: 0.0565 S23: 0.4973 REMARK 3 S31: 0.0858 S32: -0.6952 S33: -0.1335 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 2 F 58 REMARK 3 ORIGIN FOR THE GROUP (A): 33.1061 39.3080 -46.3563 REMARK 3 T TENSOR REMARK 3 T11: -0.1038 T22: -0.1320 REMARK 3 T33: -0.1720 T12: -0.0489 REMARK 3 T13: 0.0034 T23: -0.0447 REMARK 3 L TENSOR REMARK 3 L11: 3.5305 L22: 6.3547 REMARK 3 L33: 6.2017 L12: -1.0064 REMARK 3 L13: 0.5348 L23: -0.7566 REMARK 3 S TENSOR REMARK 3 S11: 0.0849 S12: -0.0709 S13: 0.0240 REMARK 3 S21: 0.2423 S22: -0.1529 S23: 0.0596 REMARK 3 S31: -0.4015 S32: 0.2552 S33: 0.0679 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 2 G 58 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7720 56.0852 16.7467 REMARK 3 T TENSOR REMARK 3 T11: -0.1706 T22: -0.1385 REMARK 3 T33: 0.1901 T12: 0.0589 REMARK 3 T13: 0.0718 T23: 0.0898 REMARK 3 L TENSOR REMARK 3 L11: 8.6881 L22: 7.7932 REMARK 3 L33: 8.6217 L12: 0.7415 REMARK 3 L13: -3.1904 L23: 0.6001 REMARK 3 S TENSOR REMARK 3 S11: 0.4170 S12: 0.0436 S13: 0.8881 REMARK 3 S21: -0.1668 S22: -0.0139 S23: 0.2966 REMARK 3 S31: -0.6049 S32: -0.0592 S33: -0.4032 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 2 H 58 REMARK 3 ORIGIN FOR THE GROUP (A): -0.3896 34.0708 17.4207 REMARK 3 T TENSOR REMARK 3 T11: -0.1338 T22: -0.0918 REMARK 3 T33: -0.1092 T12: -0.0388 REMARK 3 T13: -0.0439 T23: 0.0456 REMARK 3 L TENSOR REMARK 3 L11: 7.6070 L22: 4.8324 REMARK 3 L33: 7.5681 L12: 1.0317 REMARK 3 L13: -0.7544 L23: 0.6285 REMARK 3 S TENSOR REMARK 3 S11: -0.1744 S12: 0.2907 S13: -0.1423 REMARK 3 S21: -0.3849 S22: 0.2411 S23: 0.3779 REMARK 3 S31: 0.3236 S32: -0.1090 S33: -0.0667 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 2 I 58 REMARK 3 ORIGIN FOR THE GROUP (A): 0.9562 16.2892 -5.2966 REMARK 3 T TENSOR REMARK 3 T11: -0.0635 T22: -0.1397 REMARK 3 T33: -0.1470 T12: -0.0092 REMARK 3 T13: -0.0037 T23: -0.0502 REMARK 3 L TENSOR REMARK 3 L11: 7.1697 L22: 6.4623 REMARK 3 L33: 5.7176 L12: 0.7622 REMARK 3 L13: -0.2422 L23: 0.4609 REMARK 3 S TENSOR REMARK 3 S11: 0.2471 S12: -0.3908 S13: 0.1096 REMARK 3 S21: 0.3812 S22: -0.1459 S23: 0.2715 REMARK 3 S31: -0.2583 S32: -0.1234 S33: -0.1012 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : J 2 J 58 REMARK 3 ORIGIN FOR THE GROUP (A): 0.9354 16.2242 -29.6519 REMARK 3 T TENSOR REMARK 3 T11: -0.0786 T22: -0.2156 REMARK 3 T33: -0.1729 T12: 0.0188 REMARK 3 T13: -0.0520 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 10.0258 L22: 4.0359 REMARK 3 L33: 5.7009 L12: -0.5180 REMARK 3 L13: 0.9257 L23: 0.5151 REMARK 3 S TENSOR REMARK 3 S11: 0.0620 S12: 0.0171 S13: 0.2123 REMARK 3 S21: -0.0953 S22: -0.1324 S23: -0.1446 REMARK 3 S31: -0.3601 S32: -0.0296 S33: 0.0705 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : K 2 K 58 REMARK 3 ORIGIN FOR THE GROUP (A): 29.4834 67.1593 -38.0120 REMARK 3 T TENSOR REMARK 3 T11: -0.0861 T22: -0.1002 REMARK 3 T33: -0.1263 T12: 0.0642 REMARK 3 T13: 0.0478 T23: 0.0396 REMARK 3 L TENSOR REMARK 3 L11: 7.4384 L22: 7.9443 REMARK 3 L33: 2.9672 L12: 0.9199 REMARK 3 L13: 2.1644 L23: 0.3552 REMARK 3 S TENSOR REMARK 3 S11: -0.0710 S12: -0.4332 S13: -0.4669 REMARK 3 S21: 0.4874 S22: 0.1492 S23: -0.0251 REMARK 3 S31: 0.2596 S32: 0.0313 S33: -0.0783 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 2 L 58 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5225 78.2947 -38.5514 REMARK 3 T TENSOR REMARK 3 T11: 0.0281 T22: 0.0972 REMARK 3 T33: 0.1521 T12: 0.0665 REMARK 3 T13: 0.1911 T23: 0.0420 REMARK 3 L TENSOR REMARK 3 L11: 6.0553 L22: 12.1591 REMARK 3 L33: 5.0656 L12: 1.0921 REMARK 3 L13: 1.7590 L23: 2.9317 REMARK 3 S TENSOR REMARK 3 S11: -0.1942 S12: -0.7355 S13: 0.3145 REMARK 3 S21: 0.6882 S22: -0.1608 S23: 1.4356 REMARK 3 S31: -0.2129 S32: -0.5423 S33: 0.3549 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2J6K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-SEP-06. REMARK 100 THE DEPOSITION ID IS D_1290030110. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 130.0 REMARK 200 PH : 6.10 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27491 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.760 REMARK 200 RESOLUTION RANGE LOW (A) : 47.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.470 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.9800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.26 REMARK 200 R MERGE FOR SHELL (I) : 0.33000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE PH 6.1, 25% PEG REMARK 280 4000, 20% ISOPROPANOL, PH 6.10 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 60.00900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.00900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 76.96500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 60.00900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.00900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.96500 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 60.00900 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 60.00900 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 76.96500 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 60.00900 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 60.00900 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 76.96500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 9 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 10 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 11 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 12 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A1059 LIES ON A SPECIAL POSITION. REMARK 375 NA NA I1059 LIES ON A SPECIAL POSITION. REMARK 375 HOH I2004 LIES ON A SPECIAL POSITION. REMARK 375 HOH J2011 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 59 REMARK 465 GLU A 60 REMARK 465 THR A 61 REMARK 465 GLU A 62 REMARK 465 MET B 1 REMARK 465 ARG B 59 REMARK 465 GLU B 60 REMARK 465 THR B 61 REMARK 465 GLU B 62 REMARK 465 MET C 1 REMARK 465 ARG C 59 REMARK 465 GLU C 60 REMARK 465 THR C 61 REMARK 465 GLU C 62 REMARK 465 MET D 1 REMARK 465 ARG D 59 REMARK 465 GLU D 60 REMARK 465 THR D 61 REMARK 465 GLU D 62 REMARK 465 MET E 1 REMARK 465 ARG E 59 REMARK 465 GLU E 60 REMARK 465 THR E 61 REMARK 465 GLU E 62 REMARK 465 MET F 1 REMARK 465 ARG F 59 REMARK 465 GLU F 60 REMARK 465 THR F 61 REMARK 465 GLU F 62 REMARK 465 MET G 1 REMARK 465 ARG G 59 REMARK 465 GLU G 60 REMARK 465 THR G 61 REMARK 465 GLU G 62 REMARK 465 MET H 1 REMARK 465 ARG H 59 REMARK 465 GLU H 60 REMARK 465 THR H 61 REMARK 465 GLU H 62 REMARK 465 MET I 1 REMARK 465 ARG I 59 REMARK 465 GLU I 60 REMARK 465 THR I 61 REMARK 465 GLU I 62 REMARK 465 MET J 1 REMARK 465 ARG J 59 REMARK 465 GLU J 60 REMARK 465 THR J 61 REMARK 465 GLU J 62 REMARK 465 MET K 1 REMARK 465 ARG K 59 REMARK 465 GLU K 60 REMARK 465 THR K 61 REMARK 465 GLU K 62 REMARK 465 MET L 1 REMARK 465 ARG L 59 REMARK 465 GLU L 60 REMARK 465 THR L 61 REMARK 465 GLU L 62 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 18 CA - CB - CG ANGL. DEV. = 14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 22 123.40 -38.37 REMARK 500 VAL D 22 131.64 -34.90 REMARK 500 VAL F 22 120.83 -36.12 REMARK 500 VAL J 22 129.74 -35.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1059 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 43 OD1 REMARK 620 2 ASN A 43 OD1 167.1 REMARK 620 3 ASN A 43 OD1 89.3 89.3 REMARK 620 4 ASN A 43 OD1 89.3 89.3 167.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA I1059 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH I2004 O REMARK 620 2 ASN I 43 OD1 73.5 REMARK 620 3 ASN I 43 OD1 73.5 85.4 REMARK 620 4 HOH I2004 O 0.1 73.5 73.5 REMARK 620 5 HOH I2004 O 0.1 73.5 73.5 0.1 REMARK 620 6 HOH I2004 O 0.1 73.5 73.5 0.1 0.1 REMARK 620 7 ASN I 43 OD1 73.5 85.4 147.0 73.5 73.5 73.5 REMARK 620 8 ASN I 43 OD1 73.5 147.0 85.4 73.5 73.5 73.5 85.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1059 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA I1059 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2J6F RELATED DB: PDB REMARK 900 N-TERMINAL SH3 DOMAIN OF CMS (CD2AP HUMAN HOMOLOG) BOUND TO CBL-B REMARK 900 PEPTIDE REMARK 900 RELATED ID: 2J6O RELATED DB: PDB REMARK 900 ATYPICAL POLYPROLINE RECOGNITION BY THE CMS N-TERMINAL SH3 DOMAIN. REMARK 900 CMS:CD2 HETEROTRIMER REMARK 900 RELATED ID: 2J7I RELATED DB: PDB REMARK 900 ATYPICAL POLYPROLINE RECOGNITION BY THE CMS N-TERMINAL SH3 REMARK 900 DOMAIN.CMS:CD2 HETERODIMER DBREF 2J6K A 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K B 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K C 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K D 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K E 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K F 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K G 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K H 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K I 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K J 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K K 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 DBREF 2J6K L 1 62 UNP Q9Y5K6 CD2AP_HUMAN 1 62 SEQRES 1 A 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 A 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 A 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 A 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 A 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 B 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 B 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 B 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 B 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 B 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 C 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 C 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 C 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 C 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 C 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 D 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 D 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 D 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 D 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 D 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 E 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 E 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 E 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 E 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 E 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 F 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 F 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 F 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 F 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 F 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 G 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 G 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 G 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 G 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 G 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 H 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 H 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 H 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 H 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 H 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 I 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 I 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 I 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 I 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 I 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 J 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 J 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 J 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 J 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 J 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 K 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 K 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 K 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 K 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 K 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU SEQRES 1 L 62 MET VAL ASP TYR ILE VAL GLU TYR ASP TYR ASP ALA VAL SEQRES 2 L 62 HIS ASP ASP GLU LEU THR ILE ARG VAL GLY GLU ILE ILE SEQRES 3 L 62 ARG ASN VAL LYS LYS LEU GLN GLU GLU GLY TRP LEU GLU SEQRES 4 L 62 GLY GLU LEU ASN GLY ARG ARG GLY MET PHE PRO ASP ASN SEQRES 5 L 62 PHE VAL LYS GLU ILE LYS ARG GLU THR GLU HET NA A1059 1 HET NA I1059 1 HETNAM NA SODIUM ION FORMUL 13 NA 2(NA 1+) FORMUL 15 HOH *95(H2 O) HELIX 1 1 ASP A 51 PHE A 53 5 3 HELIX 2 2 ASP B 51 PHE B 53 5 3 HELIX 3 3 ASP C 51 PHE C 53 5 3 HELIX 4 4 ASP D 51 PHE D 53 5 3 HELIX 5 5 ASP E 51 PHE E 53 5 3 HELIX 6 6 ASP F 51 PHE F 53 5 3 HELIX 7 7 ASP G 51 PHE G 53 5 3 HELIX 8 8 ASP H 51 PHE H 53 5 3 HELIX 9 9 ASP I 51 PHE I 53 5 3 HELIX 10 10 ASP J 51 PHE J 53 5 3 HELIX 11 11 ASP K 51 PHE K 53 5 3 HELIX 12 12 ASP L 51 PHE L 53 5 3 SHEET 1 AA 5 ARG A 45 PRO A 50 0 SHEET 2 AA 5 TRP A 37 LEU A 42 -1 O LEU A 38 N PHE A 49 SHEET 3 AA 5 ILE A 25 LYS A 31 -1 O ARG A 27 N GLU A 41 SHEET 4 AA 5 TYR A 4 VAL A 6 -1 O TYR A 4 N ILE A 26 SHEET 5 AA 5 VAL A 54 GLU A 56 -1 O LYS A 55 N ILE A 5 SHEET 1 BA 5 ARG B 45 PRO B 50 0 SHEET 2 BA 5 TRP B 37 LEU B 42 -1 O LEU B 38 N PHE B 49 SHEET 3 BA 5 ILE B 25 LYS B 31 -1 O ARG B 27 N GLU B 41 SHEET 4 BA 5 TYR B 4 VAL B 6 -1 O TYR B 4 N ILE B 26 SHEET 5 BA 5 VAL B 54 GLU B 56 -1 O LYS B 55 N ILE B 5 SHEET 1 CA 5 ARG C 45 PRO C 50 0 SHEET 2 CA 5 TRP C 37 LEU C 42 -1 O LEU C 38 N PHE C 49 SHEET 3 CA 5 ILE C 25 LYS C 31 -1 O ARG C 27 N GLU C 41 SHEET 4 CA 5 TYR C 4 VAL C 6 -1 O TYR C 4 N ILE C 26 SHEET 5 CA 5 VAL C 54 GLU C 56 -1 O LYS C 55 N ILE C 5 SHEET 1 DA 5 ARG D 45 PRO D 50 0 SHEET 2 DA 5 TRP D 37 LEU D 42 -1 O LEU D 38 N PHE D 49 SHEET 3 DA 5 ILE D 25 LYS D 31 -1 O ARG D 27 N GLU D 41 SHEET 4 DA 5 TYR D 4 VAL D 6 -1 O TYR D 4 N ILE D 26 SHEET 5 DA 5 VAL D 54 GLU D 56 -1 O LYS D 55 N ILE D 5 SHEET 1 EA 5 ARG E 45 PRO E 50 0 SHEET 2 EA 5 TRP E 37 LEU E 42 -1 O LEU E 38 N PHE E 49 SHEET 3 EA 5 ILE E 25 LYS E 31 -1 O ARG E 27 N GLU E 41 SHEET 4 EA 5 TYR E 4 VAL E 6 -1 O TYR E 4 N ILE E 26 SHEET 5 EA 5 VAL E 54 GLU E 56 -1 O LYS E 55 N ILE E 5 SHEET 1 FA 5 ARG F 45 PRO F 50 0 SHEET 2 FA 5 TRP F 37 LEU F 42 -1 O LEU F 38 N PHE F 49 SHEET 3 FA 5 ILE F 25 LYS F 31 -1 O ARG F 27 N GLU F 41 SHEET 4 FA 5 TYR F 4 VAL F 6 -1 O TYR F 4 N ILE F 26 SHEET 5 FA 5 VAL F 54 GLU F 56 -1 O LYS F 55 N ILE F 5 SHEET 1 GA 5 ARG G 45 PRO G 50 0 SHEET 2 GA 5 TRP G 37 LEU G 42 -1 O LEU G 38 N PHE G 49 SHEET 3 GA 5 ILE G 25 LYS G 31 -1 O ARG G 27 N GLU G 41 SHEET 4 GA 5 TYR G 4 VAL G 6 -1 O TYR G 4 N ILE G 26 SHEET 5 GA 5 VAL G 54 GLU G 56 -1 O LYS G 55 N ILE G 5 SHEET 1 HA 5 ARG H 45 PRO H 50 0 SHEET 2 HA 5 TRP H 37 LEU H 42 -1 O LEU H 38 N PHE H 49 SHEET 3 HA 5 ILE H 25 LYS H 31 -1 O ARG H 27 N GLU H 41 SHEET 4 HA 5 TYR H 4 VAL H 6 -1 O TYR H 4 N ILE H 26 SHEET 5 HA 5 VAL H 54 GLU H 56 -1 O LYS H 55 N ILE H 5 SHEET 1 IA 5 ARG I 45 PRO I 50 0 SHEET 2 IA 5 TRP I 37 LEU I 42 -1 O LEU I 38 N PHE I 49 SHEET 3 IA 5 ILE I 25 LYS I 31 -1 O ARG I 27 N GLU I 41 SHEET 4 IA 5 TYR I 4 VAL I 6 -1 O TYR I 4 N ILE I 26 SHEET 5 IA 5 VAL I 54 GLU I 56 -1 O LYS I 55 N ILE I 5 SHEET 1 JA 5 ARG J 45 PRO J 50 0 SHEET 2 JA 5 TRP J 37 LEU J 42 -1 O LEU J 38 N PHE J 49 SHEET 3 JA 5 ILE J 25 LYS J 31 -1 O ARG J 27 N GLU J 41 SHEET 4 JA 5 TYR J 4 VAL J 6 -1 O TYR J 4 N ILE J 26 SHEET 5 JA 5 VAL J 54 GLU J 56 -1 O LYS J 55 N ILE J 5 SHEET 1 KA 5 ARG K 45 PRO K 50 0 SHEET 2 KA 5 TRP K 37 LEU K 42 -1 O LEU K 38 N PHE K 49 SHEET 3 KA 5 ILE K 25 LYS K 31 -1 O ARG K 27 N GLU K 41 SHEET 4 KA 5 TYR K 4 VAL K 6 -1 O TYR K 4 N ILE K 26 SHEET 5 KA 5 VAL K 54 GLU K 56 -1 O LYS K 55 N ILE K 5 SHEET 1 LA 5 ARG L 45 PRO L 50 0 SHEET 2 LA 5 TRP L 37 LEU L 42 -1 O LEU L 38 N PHE L 49 SHEET 3 LA 5 ILE L 25 LYS L 31 -1 O ARG L 27 N GLU L 41 SHEET 4 LA 5 TYR L 4 VAL L 6 -1 O TYR L 4 N ILE L 26 SHEET 5 LA 5 VAL L 54 GLU L 56 -1 O LYS L 55 N ILE L 5 LINK NA NA A1059 OD1 ASN A 43 1555 1555 2.46 LINK NA NA A1059 OD1 ASN A 43 1555 2665 2.46 LINK NA NA A1059 OD1 ASN A 43 1555 4565 2.46 LINK NA NA A1059 OD1 ASN A 43 1555 3655 2.46 LINK NA NA I1059 O HOH I2004 1555 2555 2.28 LINK NA NA I1059 OD1 ASN I 43 1555 2555 2.42 LINK NA NA I1059 OD1 ASN I 43 1555 3555 2.42 LINK NA NA I1059 O HOH I2004 1555 1555 2.28 LINK NA NA I1059 O HOH I2004 1555 3555 2.28 LINK NA NA I1059 O HOH I2004 1555 4555 2.28 LINK NA NA I1059 OD1 ASN I 43 1555 4555 2.42 LINK NA NA I1059 OD1 ASN I 43 1555 1555 2.42 SITE 1 AC1 1 ASN A 43 SITE 1 AC2 2 ASN I 43 HOH I2004 CRYST1 120.018 120.018 153.930 90.00 90.00 90.00 I 4 96 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008332 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008332 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006496 0.00000