PDB Short entry for 2JAM HEADER TRANSFERASE 29-NOV-06 2JAM TITLE CRYSTAL STRUCTURE OF HUMAN CALMODULIN-DEPENDENT PROTEIN KINASE I G COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE 1G; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, RESIDUES 18-316; COMPND 5 SYNONYM: CAM KINASE IG, CAM KINASE I GAMMA, CAMKI GAMMA, CAMKI-GAMMA, COMPND 6 CAM-KI GAMMA, CAMKIG, CAMK-LIKE CREB KINASE III, CLICK III, COMPND 7 CALMODULIN-DEPENDENT, PROTEIN, KINASE, I, G; COMPND 8 EC: 2.7.11.17; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: POLYPEPTIDE; COMPND 12 CHAIN: D; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: POLYPEPTIDE; COMPND 15 CHAIN: E SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: R3 ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PNIC28-BSA4; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 11 ORGANISM_TAXID: 32644; SOURCE 12 OTHER_DETAILS: UNKNOWN ORIGIN; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 15 ORGANISM_TAXID: 32644; SOURCE 16 OTHER_DETAILS: UNKNOWN ORIGIN KEYWDS TRANSFERASE, KINASE, MEMBRANE, ATP-BINDING, PRENYLATION, KEYWDS 2 SERINE/THREONINE-PROTEIN KINASE, ALTERNATIVE SPLICING, PROTEIN KEYWDS 3 SERINE/THREONINE KINASE, CALMODULIN BINDING, CALMODULIN-BINDING, KEYWDS 4 NUCLEOTIDE BINDING, NUCLEOTIDE-BINDING, LIPOPROTEIN, POLYMORPHISM, KEYWDS 5 GOLGI APPARATUS, PHOSPHORYLATION, ALLOSTERIC ENZYME EXPDTA X-RAY DIFFRACTION AUTHOR J.E.DEBRECZENI,A.BULLOCK,T.KEATES,F.H.NIESEN,E.SALAH,L.SHRESTHA, AUTHOR 2 C.SMEE,F.SOBOTT,A.C.W.PIKE,G.BUNKOCZI,F.VON DELFT,A.TURNBULL, AUTHOR 3 J.WEIGELT,C.H.ARROWSMITH,A.EDWARDS,M.SUNDSTROM,S.KNAPP REVDAT 5 13-DEC-23 2JAM 1 REMARK LINK REVDAT 4 24-JAN-18 2JAM 1 JRNL REVDAT 3 21-OCT-15 2JAM 1 SOURCE REMARK VERSN FORMUL REVDAT 2 24-FEB-09 2JAM 1 VERSN REVDAT 1 13-MAR-07 2JAM 0 JRNL AUTH J.E.DEBRECZENI,A.BULLOCK,T.KEATES,F.H.NIESEN,E.SALAH, JRNL AUTH 2 L.SHRESTHA,C.SMEE,F.SOBOTT,A.C.W.PIKE,G.BUNKOCZI, JRNL AUTH 3 F.VON DELFT,A.TURNBULL,J.WEIGELT,C.H.ARROWSMITH,A.EDWARDS, JRNL AUTH 4 M.SUNDSTROM,S.KNAPP JRNL TITL CRYSTAL STRUCTURE OF HUMAN CALMODULIN-DEPENDENT PROTEIN JRNL TITL 2 KINASE I G JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 62408 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1609 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4229 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1720 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4513 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.58000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : -0.37000 REMARK 3 B12 (A**2) : -0.81000 REMARK 3 B13 (A**2) : 0.32000 REMARK 3 B23 (A**2) : 0.11000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.141 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.112 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.078 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.166 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4745 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3184 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6437 ; 1.364 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7801 ; 0.899 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 585 ; 6.109 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 204 ;34.943 ;25.049 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 829 ;12.321 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;16.943 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 716 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5191 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 924 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 871 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3183 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2258 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2233 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 244 ; 0.139 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 6 ; 0.081 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 13 ; 0.247 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.210 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2997 ; 6.226 ; 5.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4646 ; 7.112 ; 7.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2113 ; 8.362 ; 9.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1780 ; 9.727 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2JAM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1290030664. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : SI 1 1 1 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64017 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 33.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 2.790 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.8200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.31 REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1A06 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.20M NA(MALONATE), 0.1M BTPROP PH REMARK 280 7.5, 20.0% PEG 3350, 10.0% ETGLY REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 13 REMARK 465 MET A 14 REMARK 465 GLN A 15 REMARK 465 THR A 16 REMARK 465 THR A 17 REMARK 465 SER A 57 REMARK 465 PRO A 58 REMARK 465 ALA A 59 REMARK 465 PHE A 60 REMARK 465 ARG A 61 REMARK 465 ASP A 62 REMARK 465 LYS A 304 REMARK 465 TRP A 305 REMARK 465 ARG A 306 REMARK 465 GLN A 307 REMARK 465 ALA A 308 REMARK 465 PHE A 309 REMARK 465 ASN A 310 REMARK 465 ALA A 311 REMARK 465 ALA A 312 REMARK 465 ALA A 313 REMARK 465 VAL A 314 REMARK 465 VAL A 315 REMARK 465 HIS A 316 REMARK 465 HIS A 317 REMARK 465 SER B 13 REMARK 465 MET B 14 REMARK 465 GLN B 15 REMARK 465 SER B 57 REMARK 465 PRO B 58 REMARK 465 ALA B 59 REMARK 465 PHE B 60 REMARK 465 ARG B 61 REMARK 465 ASP B 62 REMARK 465 SER B 303 REMARK 465 LYS B 304 REMARK 465 TRP B 305 REMARK 465 ARG B 306 REMARK 465 GLN B 307 REMARK 465 ALA B 308 REMARK 465 PHE B 309 REMARK 465 ASN B 310 REMARK 465 ALA B 311 REMARK 465 ALA B 312 REMARK 465 ALA B 313 REMARK 465 VAL B 314 REMARK 465 VAL B 315 REMARK 465 HIS B 316 REMARK 465 HIS B 317 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 20 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 LYS A 47 CE NZ REMARK 470 LYS A 55 CD CE NZ REMARK 470 LYS A 75 CD CE NZ REMARK 470 LYS A 77 CE NZ REMARK 470 GLU A 156 CD OE1 OE2 REMARK 470 LYS A 227 CE NZ REMARK 470 GLU A 230 CD OE1 OE2 REMARK 470 ARG A 286 CZ NH1 NH2 REMARK 470 LYS A 302 CG CD CE NZ REMARK 470 THR B 16 OG1 CG2 REMARK 470 THR B 17 OG1 CG2 REMARK 470 ARG B 20 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 21 CD CE NZ REMARK 470 LYS B 41 NZ REMARK 470 LYS B 47 CE NZ REMARK 470 LYS B 75 CE NZ REMARK 470 LYS B 77 CG CD CE NZ REMARK 470 ARG B 286 CZ NH1 NH2 REMARK 470 LYS B 302 CG CD CE NZ REMARK 470 LYS E 16 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2013 O HOH A 2035 2.19 REMARK 500 OH TYR A 94 O HOH A 2038 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 143 136.04 75.81 REMARK 500 THR A 164 -80.87 -126.22 REMARK 500 GLU A 260 124.40 -34.60 REMARK 500 ARG B 143 132.57 77.62 REMARK 500 THR B 164 -81.00 -124.15 REMARK 500 GLU B 260 118.84 -38.78 REMARK 500 ALA B 301 -38.01 -36.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 J60 B 1305 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 285 N REMARK 620 2 HOH A2152 O 127.8 REMARK 620 3 HIS B 285 N 119.9 86.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE J60 A 1305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE J60 B 1305 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE PEPTIDES CORRESPONDING TO CHAINS D AND E ARE OF UNKNOWN REMARK 999 ORIGIN, I.E. THEY WERE NOT PART OF THE CRYSTALLISATION CONDITION REMARK 999 NOR THE CONSTRUCT CRYSTALLISED. DBREF 2JAM A 13 17 PDB 2JAM 2JAM 13 17 DBREF 2JAM A 18 62 UNP Q96NX5 KCC1G_HUMAN 18 62 DBREF 2JAM A 64 317 UNP Q96NX5 KCC1G_HUMAN 63 316 DBREF 2JAM B 13 17 PDB 2JAM 2JAM 13 17 DBREF 2JAM B 18 62 UNP Q96NX5 KCC1G_HUMAN 18 62 DBREF 2JAM B 64 317 UNP Q96NX5 KCC1G_HUMAN 63 316 DBREF 2JAM D 14 19 PDB 2JAM 2JAM 14 19 DBREF 2JAM E 14 17 PDB 2JAM 2JAM 14 17 SEQRES 1 A 304 SER MET GLN THR THR ASN ILE ARG LYS THR PHE ILE PHE SEQRES 2 A 304 MET GLU VAL LEU GLY SER GLY ALA PHE SER GLU VAL PHE SEQRES 3 A 304 LEU VAL LYS GLN ARG LEU THR GLY LYS LEU PHE ALA LEU SEQRES 4 A 304 LYS CYS ILE LYS LYS SER PRO ALA PHE ARG ASP SER SER SEQRES 5 A 304 LEU GLU ASN GLU ILE ALA VAL LEU LYS LYS ILE LYS HIS SEQRES 6 A 304 GLU ASN ILE VAL THR LEU GLU ASP ILE TYR GLU SER THR SEQRES 7 A 304 THR HIS TYR TYR LEU VAL MET GLN LEU VAL SER GLY GLY SEQRES 8 A 304 GLU LEU PHE ASP ARG ILE LEU GLU ARG GLY VAL TYR THR SEQRES 9 A 304 GLU LYS ASP ALA SER LEU VAL ILE GLN GLN VAL LEU SER SEQRES 10 A 304 ALA VAL LYS TYR LEU HIS GLU ASN GLY ILE VAL HIS ARG SEQRES 11 A 304 ASP LEU LYS PRO GLU ASN LEU LEU TYR LEU THR PRO GLU SEQRES 12 A 304 GLU ASN SER LYS ILE MET ILE THR ASP PHE GLY LEU SER SEQRES 13 A 304 LYS MET GLU GLN ASN GLY ILE MET SER THR ALA CYS GLY SEQRES 14 A 304 THR PRO GLY TYR VAL ALA PRO GLU VAL LEU ALA GLN LYS SEQRES 15 A 304 PRO TYR SER LYS ALA VAL ASP CYS TRP SER ILE GLY VAL SEQRES 16 A 304 ILE THR TYR ILE LEU LEU CYS GLY TYR PRO PRO PHE TYR SEQRES 17 A 304 GLU GLU THR GLU SER LYS LEU PHE GLU LYS ILE LYS GLU SEQRES 18 A 304 GLY TYR TYR GLU PHE GLU SER PRO PHE TRP ASP ASP ILE SEQRES 19 A 304 SER GLU SER ALA LYS ASP PHE ILE CYS HIS LEU LEU GLU SEQRES 20 A 304 LYS ASP PRO ASN GLU ARG TYR THR CYS GLU LYS ALA LEU SEQRES 21 A 304 SER HIS PRO TRP ILE ASP GLY ASN THR ALA LEU HIS ARG SEQRES 22 A 304 ASP ILE TYR PRO SER VAL SER LEU GLN ILE GLN LYS ASN SEQRES 23 A 304 PHE ALA LYS SER LYS TRP ARG GLN ALA PHE ASN ALA ALA SEQRES 24 A 304 ALA VAL VAL HIS HIS SEQRES 1 B 304 SER MET GLN THR THR ASN ILE ARG LYS THR PHE ILE PHE SEQRES 2 B 304 MET GLU VAL LEU GLY SER GLY ALA PHE SER GLU VAL PHE SEQRES 3 B 304 LEU VAL LYS GLN ARG LEU THR GLY LYS LEU PHE ALA LEU SEQRES 4 B 304 LYS CYS ILE LYS LYS SER PRO ALA PHE ARG ASP SER SER SEQRES 5 B 304 LEU GLU ASN GLU ILE ALA VAL LEU LYS LYS ILE LYS HIS SEQRES 6 B 304 GLU ASN ILE VAL THR LEU GLU ASP ILE TYR GLU SER THR SEQRES 7 B 304 THR HIS TYR TYR LEU VAL MET GLN LEU VAL SER GLY GLY SEQRES 8 B 304 GLU LEU PHE ASP ARG ILE LEU GLU ARG GLY VAL TYR THR SEQRES 9 B 304 GLU LYS ASP ALA SER LEU VAL ILE GLN GLN VAL LEU SER SEQRES 10 B 304 ALA VAL LYS TYR LEU HIS GLU ASN GLY ILE VAL HIS ARG SEQRES 11 B 304 ASP LEU LYS PRO GLU ASN LEU LEU TYR LEU THR PRO GLU SEQRES 12 B 304 GLU ASN SER LYS ILE MET ILE THR ASP PHE GLY LEU SER SEQRES 13 B 304 LYS MET GLU GLN ASN GLY ILE MET SER THR ALA CYS GLY SEQRES 14 B 304 THR PRO GLY TYR VAL ALA PRO GLU VAL LEU ALA GLN LYS SEQRES 15 B 304 PRO TYR SER LYS ALA VAL ASP CYS TRP SER ILE GLY VAL SEQRES 16 B 304 ILE THR TYR ILE LEU LEU CYS GLY TYR PRO PRO PHE TYR SEQRES 17 B 304 GLU GLU THR GLU SER LYS LEU PHE GLU LYS ILE LYS GLU SEQRES 18 B 304 GLY TYR TYR GLU PHE GLU SER PRO PHE TRP ASP ASP ILE SEQRES 19 B 304 SER GLU SER ALA LYS ASP PHE ILE CYS HIS LEU LEU GLU SEQRES 20 B 304 LYS ASP PRO ASN GLU ARG TYR THR CYS GLU LYS ALA LEU SEQRES 21 B 304 SER HIS PRO TRP ILE ASP GLY ASN THR ALA LEU HIS ARG SEQRES 22 B 304 ASP ILE TYR PRO SER VAL SER LEU GLN ILE GLN LYS ASN SEQRES 23 B 304 PHE ALA LYS SER LYS TRP ARG GLN ALA PHE ASN ALA ALA SEQRES 24 B 304 ALA VAL VAL HIS HIS SEQRES 1 D 6 GLY VAL SER LYS PHE ALA SEQRES 1 E 4 VAL SER LYS PHE HET EDO A1304 4 HET J60 A1305 29 HET CA A1306 1 HET EDO B1303 4 HET EDO B1304 4 HET J60 B1305 25 HETNAM EDO 1,2-ETHANEDIOL HETNAM J60 5-[(E)-(5-CHLORO-2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE) HETNAM 2 J60 METHYL]-N-[2-(DIETHYLAMINO)ETHYL]-2,4-DIMETHYL-1H- HETNAM 3 J60 PYRROLE-3-CARBOXAMIDE HETNAM CA CALCIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 5 EDO 3(C2 H6 O2) FORMUL 6 J60 2(C22 H27 CL N4 O2) FORMUL 7 CA CA 2+ FORMUL 11 HOH *320(H2 O) HELIX 1 1 ASN A 18 THR A 22 1 5 HELIX 2 2 SER A 64 ILE A 76 1 13 HELIX 3 3 GLU A 105 GLY A 114 1 10 HELIX 4 4 THR A 117 ASN A 138 1 22 HELIX 5 5 LYS A 146 LEU A 150 5 5 HELIX 6 6 MET A 177 GLY A 182 1 6 HELIX 7 7 SER A 198 GLY A 216 1 19 HELIX 8 8 THR A 224 GLY A 235 1 12 HELIX 9 9 SER A 248 GLU A 260 1 13 HELIX 10 10 THR A 268 SER A 274 1 7 HELIX 11 11 HIS A 275 GLY A 280 1 6 HELIX 12 12 ILE A 288 PHE A 300 1 13 HELIX 13 13 ASN B 18 THR B 22 1 5 HELIX 14 14 SER B 64 ILE B 76 1 13 HELIX 15 15 GLU B 105 GLY B 114 1 10 HELIX 16 16 THR B 117 ASN B 138 1 22 HELIX 17 17 LYS B 146 LEU B 150 5 5 HELIX 18 18 MET B 177 GLY B 182 1 6 HELIX 19 19 SER B 198 GLY B 216 1 19 HELIX 20 20 THR B 224 GLY B 235 1 12 HELIX 21 21 SER B 248 GLU B 260 1 13 HELIX 22 22 THR B 268 SER B 274 1 7 HELIX 23 23 HIS B 275 GLY B 280 1 6 HELIX 24 24 ILE B 288 PHE B 300 1 13 SHEET 1 AA 6 PHE A 23 SER A 31 0 SHEET 2 AA 6 SER A 35 GLN A 42 -1 O VAL A 37 N LEU A 29 SHEET 3 AA 6 LEU A 48 LYS A 55 -1 O PHE A 49 N VAL A 40 SHEET 4 AA 6 HIS A 93 MET A 98 -1 O TYR A 94 N ILE A 54 SHEET 5 AA 6 LEU A 84 GLU A 89 -1 N GLU A 85 O VAL A 97 SHEET 6 AA 6 SER D 16 LYS D 17 -1 O SER D 16 N GLU A 89 SHEET 1 AB 2 LEU A 151 TYR A 152 0 SHEET 2 AB 2 ILE A 161 MET A 162 -1 O MET A 162 N LEU A 151 SHEET 1 BA 6 PHE B 23 SER B 31 0 SHEET 2 BA 6 SER B 35 GLN B 42 -1 O VAL B 37 N LEU B 29 SHEET 3 BA 6 LEU B 48 LYS B 55 -1 O PHE B 49 N VAL B 40 SHEET 4 BA 6 HIS B 93 MET B 98 -1 O TYR B 94 N ILE B 54 SHEET 5 BA 6 LEU B 84 GLU B 89 -1 N GLU B 85 O VAL B 97 SHEET 6 BA 6 SER E 15 LYS E 16 -1 O SER E 15 N GLU B 89 SHEET 1 BB 2 LEU B 151 TYR B 152 0 SHEET 2 BB 2 ILE B 161 MET B 162 -1 O MET B 162 N LEU B 151 LINK N HIS A 285 CA CA A1306 1555 1555 3.17 LINK CA CA A1306 O HOH A2152 1555 1555 3.33 LINK CA CA A1306 N HIS B 285 1555 1664 3.24 CISPEP 1 SER A 241 PRO A 242 0 -0.60 CISPEP 2 SER B 241 PRO B 242 0 -1.94 SITE 1 AC1 2 HIS A 285 HIS B 285 SITE 1 AC2 7 LYS A 52 THR A 164 ASP A 165 PHE A 166 SITE 2 AC2 7 SER A 169 J60 A1305 HOH A2088 SITE 1 AC3 13 LEU A 29 VAL A 37 ALA A 50 LYS A 52 SITE 2 AC3 13 MET A 98 GLN A 99 LEU A 100 VAL A 101 SITE 3 AC3 13 LEU A 151 THR A 164 ASP A 165 EDO A1304 SITE 4 AC3 13 TYR B 236 SITE 1 AC4 6 LYS B 52 THR B 164 ASP B 165 PHE B 166 SITE 2 AC4 6 J60 B1305 HOH B2149 SITE 1 AC5 9 ASP A 144 VAL A 201 SER A 205 HOH A2079 SITE 2 AC5 9 HOH A2103 ILE B 176 TYR B 186 VAL B 187 SITE 3 AC5 9 ALA B 188 SITE 1 AC6 11 LEU B 29 VAL B 37 ALA B 50 MET B 98 SITE 2 AC6 11 GLN B 99 LEU B 100 VAL B 101 THR B 164 SITE 3 AC6 11 ASP B 165 EDO B1303 HOH B2150 CRYST1 51.666 53.736 64.177 65.45 71.91 73.84 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019355 -0.005609 -0.004611 0.00000 SCALE2 0.000000 0.019375 -0.007486 0.00000 SCALE3 0.000000 0.000000 0.017573 0.00000 MTRIX1 1 0.315810 -0.397790 0.861410 -10.44657 1 MTRIX2 1 -0.396370 -0.880170 -0.261140 23.59398 1 MTRIX3 1 0.862070 -0.258970 -0.435640 26.89625 1