PDB Short entry for 2JLG HEADER TRANSFERASE 09-SEP-08 2JLG TITLE STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 RNA- TITLE 2 DEPENDENT RNA POLYMERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: PROTEIN P2; COMPND 5 EC: 2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*DT DT DT DC DCP)-3'; COMPND 10 CHAIN: D, E, F; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PHAGE PHI6; SOURCE 3 ORGANISM_TAXID: 10879; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: PSEUDOMONAS PHAGE PHI6; SOURCE 10 ORGANISM_TAXID: 10879 KEYWDS NUCLEOTIDYLTRANSFERASE, RNA-DIRECTED RNA POLYMERASE, METAL-BINDING, KEYWDS 2 RNA POLYMERASE, RNA REPLICATION, VIRION, MANGANESE, MAGNESIUM, KEYWDS 3 TRANSFERASE, VIRAL POLYMERASE, NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.M.PORANEN,P.S.SALGADO,M.R.L.KOIVUNEN,S.WRIGHT,D.H.BAMFORD, AUTHOR 2 D.I.STUART,J.M.GRIMES REVDAT 4 13-DEC-23 2JLG 1 LINK REVDAT 3 24-FEB-09 2JLG 1 VERSN REVDAT 2 25-NOV-08 2JLG 1 JRNL REMARK REVDAT 1 04-NOV-08 2JLG 0 JRNL AUTH M.M.PORANEN,P.S.SALGADO,M.R.L.KOIVUNEN,S.WRIGHT,D.H.BAMFORD, JRNL AUTH 2 D.I.STUART,J.M.GRIMES JRNL TITL STRUCTURAL EXPLANATION FOR THE ROLE OF MN2+ IN THE ACTIVITY JRNL TITL 2 OF {PHI}6 RNA-DEPENDENT RNA POLYMERASE. JRNL REF NUCLEIC ACIDS RES. V. 36 6633 2008 JRNL REFN ISSN 0305-1048 JRNL PMID 18940872 JRNL DOI 10.1093/NAR/GKN632 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 51726 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 2641 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9442 - 7.3518 0.99 2562 133 0.1497 0.2103 REMARK 3 2 7.3518 - 5.8847 0.99 2545 140 0.1589 0.2263 REMARK 3 3 5.8847 - 5.1555 0.99 2595 123 0.1594 0.2386 REMARK 3 4 5.1555 - 4.6908 1.00 2602 137 0.1508 0.2453 REMARK 3 5 4.6908 - 4.3584 1.00 2543 152 0.1593 0.2192 REMARK 3 6 4.3584 - 4.1038 1.00 2587 147 0.1724 0.2646 REMARK 3 7 4.1038 - 3.8998 1.00 2582 143 0.1910 0.2922 REMARK 3 8 3.8998 - 3.7312 1.00 2621 133 0.1951 0.2944 REMARK 3 9 3.7312 - 3.5884 1.00 2585 125 0.2013 0.2653 REMARK 3 10 3.5884 - 3.4653 1.00 2573 146 0.2229 0.3040 REMARK 3 11 3.4653 - 3.3574 1.00 2579 151 0.2330 0.3258 REMARK 3 12 3.3574 - 3.2619 1.00 2588 133 0.2569 0.3297 REMARK 3 13 3.2619 - 3.1764 1.00 2609 151 0.2609 0.3802 REMARK 3 14 3.1764 - 3.0992 1.00 2556 147 0.2603 0.3399 REMARK 3 15 3.0992 - 3.0290 1.00 2554 131 0.2730 0.3147 REMARK 3 16 3.0290 - 2.9647 1.00 2614 117 0.2619 0.3446 REMARK 3 17 2.9647 - 2.9056 1.00 2608 150 0.2765 0.3582 REMARK 3 18 2.9056 - 2.8509 1.00 2622 155 0.2806 0.3675 REMARK 3 19 2.8509 - 2.8001 1.00 2560 127 0.3027 0.3701 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 13.02 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.530 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.37820 REMARK 3 B22 (A**2) : -0.37820 REMARK 3 B33 (A**2) : 0.75630 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.000 16523 REMARK 3 ANGLE : 1.300 22429 REMARK 3 CHIRALITY : 0.090 2355 REMARK 3 PLANARITY : 0.000 2860 REMARK 3 DIHEDRAL : 20.190 6105 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 3:69 OR RESSEQ 73: REMARK 3 208 OR RESSEQ 210:213 OR RESSEQ 221:256 REMARK 3 OR RESSEQ 258:476 OR RESSEQ 478:488 OR REMARK 3 RESSEQ 490:504 OR RESSEQ 506:510 OR REMARK 3 RESSEQ 512:536 OR RESSEQ 538:602 OR REMARK 3 RESSEQ 611:619 OR RESSEQ 621:625 OR REMARK 3 RESSEQ 636:663 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 3:69 OR RESSEQ 73: REMARK 3 208 OR RESSEQ 210:213 OR RESSEQ 221:256 REMARK 3 OR RESSEQ 258:476 OR RESSEQ 478:488 OR REMARK 3 RESSEQ 490:504 OR RESSEQ 506:510 OR REMARK 3 RESSEQ 512:536 OR RESSEQ 538:602 OR REMARK 3 RESSEQ 611:619 OR RESSEQ 621:625 OR REMARK 3 RESSEQ 636:663 ) REMARK 3 ATOM PAIRS NUMBER : 4949 REMARK 3 RMSD : 0.077 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SOME BADLY DISORDERED REGIONS IN REMARK 3 MOLECULE C WERE NOT MODELLED. REMARK 4 REMARK 4 2JLG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1290037505. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52552 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.21000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 1.00000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1HHS REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.89000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.94500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 492 TO GLN REMARK 400 ENGINEERED RESIDUE IN CHAIN B, GLU 492 TO GLN REMARK 400 ENGINEERED RESIDUE IN CHAIN C, GLU 492 TO GLN REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL C 602 REMARK 465 ALA C 603 REMARK 465 SER C 604 REMARK 465 MET C 605 REMARK 465 ALA C 606 REMARK 465 ARG C 607 REMARK 465 GLN C 608 REMARK 465 ALA C 609 REMARK 465 GLY C 610 REMARK 465 LEU C 611 REMARK 465 ALA C 612 REMARK 465 GLU C 613 REMARK 465 LEU C 614 REMARK 465 DT F 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT F 4 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP C 428 OG SER C 431 1.94 REMARK 500 O VAL C 325 OD1 ASP C 453 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN B 20 NH2 ARG B 122 2664 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 30 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG A 30 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 ARG A 204 CD - NE - CZ ANGL. DEV. = 9.5 DEGREES REMARK 500 ARG A 204 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG A 204 NE - CZ - NH2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG A 269 NE - CZ - NH1 ANGL. DEV. = -7.0 DEGREES REMARK 500 ARG A 269 NE - CZ - NH2 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG A 307 CD - NE - CZ ANGL. DEV. = 9.4 DEGREES REMARK 500 ARG A 307 NE - CZ - NH1 ANGL. DEV. = -7.1 DEGREES REMARK 500 ARG A 307 NE - CZ - NH2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG A 506 NE - CZ - NH1 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG A 506 NE - CZ - NH2 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG A 584 CD - NE - CZ ANGL. DEV. = 8.6 DEGREES REMARK 500 ARG A 584 NE - CZ - NH1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 584 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG B 30 NE - CZ - NH1 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG B 30 NE - CZ - NH2 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG B 204 CD - NE - CZ ANGL. DEV. = 8.7 DEGREES REMARK 500 ARG B 204 NE - CZ - NH1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG B 204 NE - CZ - NH2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG B 269 CD - NE - CZ ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG B 269 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG B 269 NE - CZ - NH2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG B 307 CD - NE - CZ ANGL. DEV. = 9.2 DEGREES REMARK 500 ARG B 307 NE - CZ - NH1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG B 307 NE - CZ - NH2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ARG B 506 CD - NE - CZ ANGL. DEV. = 8.7 DEGREES REMARK 500 ARG B 506 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG B 506 NE - CZ - NH2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG B 584 NE - CZ - NH1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG B 584 NE - CZ - NH2 ANGL. DEV. = 5.2 DEGREES REMARK 500 SER C 207 N - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 PRO C 625 C - N - CA ANGL. DEV. = 10.6 DEGREES REMARK 500 DC D 7 O4' - C1' - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DT E 3 O4' - C1' - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DT E 4 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC E 6 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT F 5 N3 - C4 - O4 ANGL. DEV. = 4.1 DEGREES REMARK 500 DC F 6 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 2 108.23 -15.90 REMARK 500 ASP A 70 -146.19 -84.54 REMARK 500 TYR A 72 -50.44 98.41 REMARK 500 CYS A 152 -131.88 43.78 REMARK 500 SER A 296 -80.54 -97.03 REMARK 500 THR A 305 -85.11 -143.88 REMARK 500 TRP A 332 127.51 -38.70 REMARK 500 ALA A 369 75.31 -158.26 REMARK 500 GLU A 373 39.88 70.44 REMARK 500 ASP A 386 30.17 -149.91 REMARK 500 HIS A 421 1.47 -59.97 REMARK 500 SER A 424 -9.54 -54.05 REMARK 500 SER A 452 -120.34 46.97 REMARK 500 LEU A 497 35.95 33.32 REMARK 500 SER A 604 20.52 -71.54 REMARK 500 MET A 605 -71.67 -101.74 REMARK 500 ARG A 607 129.79 78.11 REMARK 500 GLN A 608 82.10 86.93 REMARK 500 ALA A 609 -53.26 -159.64 REMARK 500 ALA A 612 -126.77 55.15 REMARK 500 ASP A 624 83.41 -163.95 REMARK 500 TYR A 630 -35.57 -161.24 REMARK 500 LYS A 631 -60.91 -104.00 REMARK 500 GLU A 634 -73.33 -3.07 REMARK 500 GLU A 643 -9.57 -59.88 REMARK 500 SER A 650 111.13 -22.17 REMARK 500 ARG B 2 -67.17 -99.72 REMARK 500 ASP B 70 -172.47 -53.08 REMARK 500 CYS B 152 -130.80 45.20 REMARK 500 LYS B 216 -92.11 -54.24 REMARK 500 SER B 296 -78.28 -98.24 REMARK 500 THR B 305 -84.88 -141.86 REMARK 500 ALA B 369 77.31 -161.63 REMARK 500 ASP B 386 31.30 -151.54 REMARK 500 HIS B 421 0.87 -59.24 REMARK 500 SER B 452 -122.56 51.74 REMARK 500 SER B 489 140.17 -172.67 REMARK 500 LEU B 497 36.19 35.17 REMARK 500 ASP B 504 -162.00 -101.29 REMARK 500 ALA B 603 -68.90 -22.24 REMARK 500 SER B 604 -7.78 -53.32 REMARK 500 MET B 605 -70.13 -95.61 REMARK 500 ALA B 606 134.04 88.80 REMARK 500 ARG B 607 -67.26 -23.69 REMARK 500 ALA B 612 -126.32 52.39 REMARK 500 ASP B 624 81.94 -161.57 REMARK 500 LYS B 627 6.17 -52.78 REMARK 500 LYS B 631 -86.66 -141.89 REMARK 500 TRP B 632 -142.28 -92.99 REMARK 500 THR B 633 171.23 170.99 REMARK 500 REMARK 500 THIS ENTRY HAS 117 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS C 627 LEU C 628 149.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP A1665 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP C1665 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP C1666 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C1667 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP B1665 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UVN RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1UVJ RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1HHT RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 TEMPLATE REMARK 900 RELATED ID: 2JL9 RELATED DB: PDB REMARK 900 STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 2JLF RELATED DB: PDB REMARK 900 STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1HI1 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 BOUND NTP REMARK 900 RELATED ID: 1WAC RELATED DB: PDB REMARK 900 BACK-PRIMING MODE OF PHI6 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1UVM RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1UVK RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1HHS RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 REMARK 900 RELATED ID: 1HI0 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 INITIATION COMPLEX REMARK 900 RELATED ID: 1UVI RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1UVL RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1HI8 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 REMARK 999 REMARK 999 SEQUENCE REMARK 999 GLU 491 HAS BEEN MUTATED TO GLN DBREF 2JLG A 1 664 UNP P11124 RDRP_BPPH6 2 665 DBREF 2JLG B 1 664 UNP P11124 RDRP_BPPH6 2 665 DBREF 2JLG C 1 664 UNP P11124 RDRP_BPPH6 2 665 DBREF 2JLG D 3 7 PDB 2JLG 2JLG 3 7 DBREF 2JLG E 3 7 PDB 2JLG 2JLG 3 7 DBREF 2JLG F 3 7 PDB 2JLG 2JLG 3 7 SEQADV 2JLG MET A 456 UNP P11124 ILE 457 CONFLICT SEQADV 2JLG GLN A 491 UNP P11124 GLU 492 ENGINEERED MUTATION SEQADV 2JLG MET B 456 UNP P11124 ILE 457 CONFLICT SEQADV 2JLG GLN B 491 UNP P11124 GLU 492 ENGINEERED MUTATION SEQADV 2JLG MET C 456 UNP P11124 ILE 457 CONFLICT SEQADV 2JLG GLN C 491 UNP P11124 GLU 492 ENGINEERED MUTATION SEQRES 1 A 664 PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE LYS SEQRES 2 A 664 ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN GLN SEQRES 3 A 664 ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU THR SEQRES 4 A 664 TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SER SEQRES 5 A 664 PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS PHE SEQRES 6 A 664 PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY ASN SEQRES 7 A 664 GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET ASN SEQRES 8 A 664 GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SER SEQRES 9 A 664 ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP GLY SEQRES 10 A 664 PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA ALA SEQRES 11 A 664 VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO LEU SEQRES 12 A 664 LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR PHE SEQRES 13 A 664 SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU ARG SEQRES 14 A 664 ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET LEU SEQRES 15 A 664 GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN MET SEQRES 16 A 664 GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER THR SEQRES 17 A 664 ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE VAL SEQRES 18 A 664 SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA VAL SEQRES 19 A 664 THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER LYS SEQRES 20 A 664 ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP VAL SEQRES 21 A 664 PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA MET SEQRES 22 A 664 GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA VAL SEQRES 23 A 664 ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR ALA SEQRES 24 A 664 TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU GLU SEQRES 25 A 664 LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP VAL SEQRES 26 A 664 SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG ASP SEQRES 27 A 664 LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA PRO SEQRES 28 A 664 TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU PRO SEQRES 29 A 664 VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS THR SEQRES 30 A 664 LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL GLY SEQRES 31 A 664 LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY THR SEQRES 32 A 664 LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU ASP SEQRES 33 A 664 HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP MET SEQRES 34 A 664 PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN GLY SEQRES 35 A 664 HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP ALA SEQRES 36 A 664 MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY GLY SEQRES 37 A 664 HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL ASN SEQRES 38 A 664 PRO SER PRO TYR MET LYS ILE SER TYR GLN HIS GLY GLY SEQRES 39 A 664 ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG ARG SEQRES 40 A 664 GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SER SEQRES 41 A 664 MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL GLN SEQRES 42 A 664 SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO PHE SEQRES 43 A 664 PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR GLY SEQRES 44 A 664 ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE GLU SEQRES 45 A 664 ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG ALA SEQRES 46 A 664 TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU LEU SEQRES 47 A 664 SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY LEU SEQRES 48 A 664 ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA ASP SEQRES 49 A 664 PRO ASN LYS LEU GLN TYR LYS TRP THR GLU ALA ASP VAL SEQRES 50 A 664 SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SER SEQRES 51 A 664 VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET PRO SEQRES 52 A 664 ARG SEQRES 1 B 664 PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE LYS SEQRES 2 B 664 ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN GLN SEQRES 3 B 664 ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU THR SEQRES 4 B 664 TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SER SEQRES 5 B 664 PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS PHE SEQRES 6 B 664 PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY ASN SEQRES 7 B 664 GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET ASN SEQRES 8 B 664 GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SER SEQRES 9 B 664 ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP GLY SEQRES 10 B 664 PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA ALA SEQRES 11 B 664 VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO LEU SEQRES 12 B 664 LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR PHE SEQRES 13 B 664 SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU ARG SEQRES 14 B 664 ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET LEU SEQRES 15 B 664 GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN MET SEQRES 16 B 664 GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER THR SEQRES 17 B 664 ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE VAL SEQRES 18 B 664 SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA VAL SEQRES 19 B 664 THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER LYS SEQRES 20 B 664 ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP VAL SEQRES 21 B 664 PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA MET SEQRES 22 B 664 GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA VAL SEQRES 23 B 664 ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR ALA SEQRES 24 B 664 TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU GLU SEQRES 25 B 664 LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP VAL SEQRES 26 B 664 SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG ASP SEQRES 27 B 664 LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA PRO SEQRES 28 B 664 TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU PRO SEQRES 29 B 664 VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS THR SEQRES 30 B 664 LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL GLY SEQRES 31 B 664 LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY THR SEQRES 32 B 664 LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU ASP SEQRES 33 B 664 HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP MET SEQRES 34 B 664 PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN GLY SEQRES 35 B 664 HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP ALA SEQRES 36 B 664 MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY GLY SEQRES 37 B 664 HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL ASN SEQRES 38 B 664 PRO SER PRO TYR MET LYS ILE SER TYR GLN HIS GLY GLY SEQRES 39 B 664 ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG ARG SEQRES 40 B 664 GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SER SEQRES 41 B 664 MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL GLN SEQRES 42 B 664 SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO PHE SEQRES 43 B 664 PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR GLY SEQRES 44 B 664 ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE GLU SEQRES 45 B 664 ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG ALA SEQRES 46 B 664 TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU LEU SEQRES 47 B 664 SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY LEU SEQRES 48 B 664 ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA ASP SEQRES 49 B 664 PRO ASN LYS LEU GLN TYR LYS TRP THR GLU ALA ASP VAL SEQRES 50 B 664 SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SER SEQRES 51 B 664 VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET PRO SEQRES 52 B 664 ARG SEQRES 1 C 664 PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE LYS SEQRES 2 C 664 ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN GLN SEQRES 3 C 664 ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU THR SEQRES 4 C 664 TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SER SEQRES 5 C 664 PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS PHE SEQRES 6 C 664 PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY ASN SEQRES 7 C 664 GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET ASN SEQRES 8 C 664 GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SER SEQRES 9 C 664 ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP GLY SEQRES 10 C 664 PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA ALA SEQRES 11 C 664 VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO LEU SEQRES 12 C 664 LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR PHE SEQRES 13 C 664 SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU ARG SEQRES 14 C 664 ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET LEU SEQRES 15 C 664 GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN MET SEQRES 16 C 664 GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER THR SEQRES 17 C 664 ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE VAL SEQRES 18 C 664 SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA VAL SEQRES 19 C 664 THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER LYS SEQRES 20 C 664 ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP VAL SEQRES 21 C 664 PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA MET SEQRES 22 C 664 GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA VAL SEQRES 23 C 664 ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR ALA SEQRES 24 C 664 TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU GLU SEQRES 25 C 664 LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP VAL SEQRES 26 C 664 SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG ASP SEQRES 27 C 664 LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA PRO SEQRES 28 C 664 TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU PRO SEQRES 29 C 664 VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS THR SEQRES 30 C 664 LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL GLY SEQRES 31 C 664 LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY THR SEQRES 32 C 664 LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU ASP SEQRES 33 C 664 HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP MET SEQRES 34 C 664 PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN GLY SEQRES 35 C 664 HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP ALA SEQRES 36 C 664 MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY GLY SEQRES 37 C 664 HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL ASN SEQRES 38 C 664 PRO SER PRO TYR MET LYS ILE SER TYR GLN HIS GLY GLY SEQRES 39 C 664 ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG ARG SEQRES 40 C 664 GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SER SEQRES 41 C 664 MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL GLN SEQRES 42 C 664 SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO PHE SEQRES 43 C 664 PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR GLY SEQRES 44 C 664 ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE GLU SEQRES 45 C 664 ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG ALA SEQRES 46 C 664 TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU LEU SEQRES 47 C 664 SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY LEU SEQRES 48 C 664 ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA ASP SEQRES 49 C 664 PRO ASN LYS LEU GLN TYR LYS TRP THR GLU ALA ASP VAL SEQRES 50 C 664 SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SER SEQRES 51 C 664 VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET PRO SEQRES 52 C 664 ARG SEQRES 1 D 5 DT DT DT DC DC SEQRES 1 E 5 DT DT DT DC DC SEQRES 1 F 5 DT DT DT DC DC HET GTP A1665 32 HET GTP B1665 32 HET GTP C1665 32 HET GTP C1666 32 HET MN C1667 1 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM MN MANGANESE (II) ION FORMUL 7 GTP 4(C10 H16 N5 O14 P3) FORMUL 11 MN MN 2+ HELIX 1 1 ASP A 11 MET A 16 1 6 HELIX 2 2 ASN A 21 ARG A 30 1 10 HELIX 3 3 ASP A 47 PHE A 65 1 19 HELIX 4 4 PHE A 84 MET A 87 5 4 HELIX 5 5 ASN A 105 ALA A 112 1 8 HELIX 6 6 SER A 120 SER A 136 1 17 HELIX 7 7 ASP A 159 GLN A 183 1 25 HELIX 8 8 LYS A 185 GLN A 194 1 10 HELIX 9 9 ASP A 229 THR A 235 1 7 HELIX 10 10 SER A 250 GLY A 257 1 8 HELIX 11 11 PRO A 276 TYR A 298 1 23 HELIX 12 12 TYR A 298 HIS A 303 1 6 HELIX 13 13 THR A 306 LYS A 315 1 10 HELIX 14 14 ASP A 327 TRP A 332 1 6 HELIX 15 15 PRO A 333 MET A 347 1 15 HELIX 16 16 ALA A 350 LEU A 361 1 12 HELIX 17 17 ALA A 397 ALA A 419 1 23 HELIX 18 18 PRO A 420 ILE A 426 5 7 HELIX 19 19 ASP A 428 GLY A 442 1 15 HELIX 20 20 ARG A 463 GLY A 478 1 16 HELIX 21 21 GLU A 508 ALA A 512 5 5 HELIX 22 22 ASN A 517 SER A 527 1 11 HELIX 23 23 ASP A 538 ARG A 542 5 5 HELIX 24 24 PHE A 546 LEU A 549 5 4 HELIX 25 25 ALA A 550 GLY A 559 1 10 HELIX 26 26 ILE A 563 GLY A 580 1 18 HELIX 27 27 SER A 582 VAL A 602 1 21 HELIX 28 28 THR A 615 ASP A 624 1 10 HELIX 29 29 PRO A 625 LEU A 628 5 4 HELIX 30 30 THR A 633 VAL A 637 5 5 HELIX 31 31 SER A 638 LEU A 645 1 8 HELIX 32 32 SER A 650 MET A 662 1 13 HELIX 33 33 ASP B 11 MET B 16 1 6 HELIX 34 34 ASN B 21 ARG B 30 1 10 HELIX 35 35 ASP B 47 PHE B 65 1 19 HELIX 36 36 PHE B 84 MET B 87 5 4 HELIX 37 37 ASN B 105 ALA B 112 1 8 HELIX 38 38 SER B 120 SER B 136 1 17 HELIX 39 39 ASP B 159 GLN B 183 1 25 HELIX 40 40 LYS B 185 GLN B 194 1 10 HELIX 41 41 ASP B 229 GLY B 236 1 8 HELIX 42 42 SER B 250 GLY B 257 1 8 HELIX 43 43 PRO B 276 TYR B 298 1 23 HELIX 44 44 TYR B 298 HIS B 303 1 6 HELIX 45 45 THR B 306 LYS B 315 1 10 HELIX 46 46 ASP B 327 TRP B 332 1 6 HELIX 47 47 PRO B 333 MET B 347 1 15 HELIX 48 48 ALA B 350 LEU B 361 1 12 HELIX 49 49 ALA B 397 ALA B 419 1 23 HELIX 50 50 PRO B 420 ILE B 426 5 7 HELIX 51 51 ASP B 428 GLY B 442 1 15 HELIX 52 52 ARG B 463 GLY B 478 1 16 HELIX 53 53 GLU B 508 ALA B 512 5 5 HELIX 54 54 ASN B 517 SER B 527 1 11 HELIX 55 55 ASP B 538 ARG B 542 5 5 HELIX 56 56 PHE B 546 LEU B 549 5 4 HELIX 57 57 ALA B 550 GLY B 559 1 10 HELIX 58 58 ILE B 563 GLY B 580 1 18 HELIX 59 59 SER B 582 VAL B 602 1 21 HELIX 60 60 THR B 615 ASP B 624 1 10 HELIX 61 61 PRO B 625 GLN B 629 5 5 HELIX 62 62 THR B 633 VAL B 637 5 5 HELIX 63 63 SER B 638 LEU B 645 1 8 HELIX 64 64 SER B 650 MET B 662 1 13 HELIX 65 65 ASP C 11 MET C 16 1 6 HELIX 66 66 ASN C 21 ARG C 30 1 10 HELIX 67 67 ASP C 47 HIS C 64 1 18 HELIX 68 68 PHE C 84 MET C 87 5 4 HELIX 69 69 ASN C 105 ALA C 112 1 8 HELIX 70 70 SER C 120 PHE C 135 1 16 HELIX 71 71 ASP C 159 GLN C 183 1 25 HELIX 72 72 LYS C 185 GLN C 194 1 10 HELIX 73 73 ASP C 229 THR C 235 1 7 HELIX 74 74 ARG C 251 TYR C 256 1 6 HELIX 75 75 PRO C 276 LYS C 297 1 22 HELIX 76 76 TYR C 298 HIS C 303 1 6 HELIX 77 77 THR C 306 LYS C 315 1 10 HELIX 78 78 ASP C 327 TRP C 332 5 6 HELIX 79 79 PRO C 333 GLY C 348 1 16 HELIX 80 80 ALA C 350 LEU C 361 1 12 HELIX 81 81 ALA C 397 ALA C 419 1 23 HELIX 82 82 PRO C 420 ILE C 426 5 7 HELIX 83 83 ASP C 428 GLY C 442 1 15 HELIX 84 84 GLY C 462 GLY C 478 1 17 HELIX 85 85 ASN C 517 SER C 527 1 11 HELIX 86 86 ASP C 538 ARG C 542 5 5 HELIX 87 87 PHE C 546 LEU C 549 5 4 HELIX 88 88 ALA C 550 TYR C 558 1 9 HELIX 89 89 ILE C 563 ASN C 577 1 15 HELIX 90 90 SER C 582 ARG C 587 1 6 HELIX 91 91 ARG C 587 TYR C 601 1 15 HELIX 92 92 THR C 615 ASP C 624 1 10 HELIX 93 93 SER C 638 LEU C 645 1 8 HELIX 94 94 SER C 650 MET C 662 1 13 SHEET 1 AA 6 ALA A 6 PRO A 8 0 SHEET 2 AA 6 THR A 377 LEU A 379 -1 O LEU A 378 N PHE A 7 SHEET 3 AA 6 VAL A 365 VAL A 367 -1 O VAL A 365 N LEU A 379 SHEET 4 AA 6 TYR A 199 GLN A 206 1 O TYR A 199 N TYR A 366 SHEET 5 AA 6 PHE A 265 GLY A 274 -1 O ARG A 268 N GLN A 206 SHEET 6 AA 6 HIS A 89 PRO A 94 1 N MET A 90 O PHE A 265 SHEET 1 AB 2 GLU A 38 TYR A 40 0 SHEET 2 AB 2 LEU A 43 LEU A 44 -1 O LEU A 43 N TYR A 40 SHEET 1 AC 2 ILE A 145 ARG A 146 0 SHEET 2 AC 2 MET A 646 HIS A 647 -1 O HIS A 647 N ILE A 145 SHEET 1 AD 2 ILE A 211 LEU A 213 0 SHEET 2 AD 2 PHE A 220 SER A 222 -1 O VAL A 221 N THR A 212 SHEET 1 AE 2 MET A 226 ALA A 228 0 SHEET 2 AE 2 LEU A 242 ALA A 244 -1 O PHE A 243 N VAL A 227 SHEET 1 AF 4 ILE A 446 LYS A 451 0 SHEET 2 AF 4 ASP A 454 TRP A 459 -1 O ASP A 454 N LYS A 451 SHEET 3 AF 4 LEU A 319 VAL A 325 -1 O LEU A 319 N TRP A 459 SHEET 4 AF 4 ILE A 488 TYR A 490 -1 O SER A 489 N ASP A 324 SHEET 1 AG 3 ALA A 495 PHE A 496 0 SHEET 2 AG 3 ASP A 499 LEU A 502 -1 O ASP A 499 N PHE A 496 SHEET 3 AG 3 ILE A 513 GLY A 516 -1 O ILE A 513 N LEU A 502 SHEET 1 BA 6 ALA B 6 PRO B 8 0 SHEET 2 BA 6 THR B 377 LEU B 379 -1 O LEU B 378 N PHE B 7 SHEET 3 BA 6 VAL B 365 VAL B 367 -1 O VAL B 365 N LEU B 379 SHEET 4 BA 6 TYR B 199 GLN B 206 1 O TYR B 199 N TYR B 366 SHEET 5 BA 6 PHE B 265 GLY B 274 -1 O ARG B 268 N GLN B 206 SHEET 6 BA 6 HIS B 89 PRO B 94 1 N MET B 90 O PHE B 265 SHEET 1 BB 2 GLU B 38 TYR B 40 0 SHEET 2 BB 2 LEU B 43 LEU B 44 -1 O LEU B 43 N TYR B 40 SHEET 1 BC 2 ILE B 145 ARG B 146 0 SHEET 2 BC 2 MET B 646 HIS B 647 -1 O HIS B 647 N ILE B 145 SHEET 1 BD 2 ILE B 211 ASP B 214 0 SHEET 2 BD 2 LYS B 219 SER B 222 -1 O LYS B 219 N ASP B 214 SHEET 1 BE 2 MET B 226 ALA B 228 0 SHEET 2 BE 2 LEU B 242 ALA B 244 -1 O PHE B 243 N VAL B 227 SHEET 1 BF 4 ILE B 446 LYS B 451 0 SHEET 2 BF 4 ASP B 454 TRP B 459 -1 O ASP B 454 N LYS B 451 SHEET 3 BF 4 LEU B 319 VAL B 325 -1 O LEU B 319 N TRP B 459 SHEET 4 BF 4 ILE B 488 TYR B 490 -1 O SER B 489 N ASP B 324 SHEET 1 BG 3 ALA B 495 PHE B 496 0 SHEET 2 BG 3 ASP B 499 LEU B 502 -1 O ASP B 499 N PHE B 496 SHEET 3 BG 3 ILE B 513 GLY B 516 -1 O ILE B 513 N LEU B 502 SHEET 1 CA 2 HIS C 89 PRO C 94 0 SHEET 2 CA 2 PHE C 265 GLU C 267 1 O PHE C 265 N MET C 90 SHEET 1 CB 2 LYS C 144 ARG C 146 0 SHEET 2 CB 2 MET C 646 GLY C 648 -1 O HIS C 647 N ILE C 145 SHEET 1 CC 4 ARG C 269 GLY C 274 0 SHEET 2 CC 4 TYR C 199 ALA C 205 -1 O TYR C 200 N GLY C 274 SHEET 3 CC 4 VAL C 365 VAL C 367 1 O TYR C 366 N VAL C 201 SHEET 4 CC 4 THR C 377 LEU C 379 -1 O THR C 377 N VAL C 367 SHEET 1 CD 2 ILE C 211 LEU C 213 0 SHEET 2 CD 2 PHE C 220 SER C 222 -1 O VAL C 221 N THR C 212 SHEET 1 CE 3 LEU C 319 THR C 323 0 SHEET 2 CE 3 ASP C 454 TRP C 459 -1 O ALA C 455 N THR C 323 SHEET 3 CE 3 ILE C 446 LYS C 451 -1 O ARG C 447 N GLY C 458 SHEET 1 CF 3 ALA C 495 PHE C 496 0 SHEET 2 CF 3 ASP C 499 LEU C 502 -1 O ASP C 499 N PHE C 496 SHEET 3 CF 3 ILE C 513 GLY C 516 -1 O ILE C 513 N LEU C 502 LINK O VAL C 325 MN MN C1667 1555 1555 2.26 CISPEP 1 GLU A 71 TYR A 72 0 -1.67 CISPEP 2 ILE A 96 PRO A 97 0 -4.03 CISPEP 3 ILE A 153 PRO A 154 0 4.22 CISPEP 4 MET A 605 ALA A 606 0 -11.07 CISPEP 5 ALA A 609 GLY A 610 0 -1.83 CISPEP 6 PRO B 1 ARG B 2 0 -14.20 CISPEP 7 ARG B 2 ARG B 3 0 -23.22 CISPEP 8 ILE B 96 PRO B 97 0 -2.78 CISPEP 9 ILE B 153 PRO B 154 0 5.98 CISPEP 10 PRO B 663 ARG B 664 0 -15.69 CISPEP 11 ILE C 96 PRO C 97 0 -2.27 CISPEP 12 ILE C 153 PRO C 154 0 4.30 CISPEP 13 GLN C 206 SER C 207 0 18.08 CISPEP 14 ASP C 214 PRO C 215 0 -5.75 CISPEP 15 THR C 217 GLY C 218 0 -4.85 CISPEP 16 GLY C 218 LYS C 219 0 -2.02 CISPEP 17 TYR C 256 GLY C 257 0 -1.52 CISPEP 18 VAL C 325 SER C 326 0 15.31 CISPEP 19 LEU C 502 TYR C 503 0 12.96 CISPEP 20 LEU C 628 GLN C 629 0 4.48 CISPEP 21 THR C 633 GLU C 634 0 8.59 CISPEP 22 ASP C 636 VAL C 637 0 -5.55 SITE 1 AC1 6 GLN A 206 ARG A 225 ARG A 268 ARG A 270 SITE 2 AC1 6 ASP A 327 TYR A 630 SITE 1 AC2 5 ARG C 204 ASP C 454 TYR C 630 GTP C1666 SITE 2 AC2 5 DC F 7 SITE 1 AC3 18 ARG C 204 ARG C 225 ARG C 268 ARG C 270 SITE 2 AC3 18 ASP C 324 VAL C 325 SER C 326 ASP C 327 SITE 3 AC3 18 HIS C 328 ASP C 329 LEU C 391 SER C 393 SITE 4 AC3 18 ASP C 453 ASP C 454 GTP C1665 MN C1667 SITE 5 AC3 18 DC F 6 DC F 7 SITE 1 AC4 5 ASP C 324 VAL C 325 SER C 326 ASP C 453 SITE 2 AC4 5 GTP C1666 SITE 1 AC5 8 GLN B 206 ARG B 225 ARG B 268 ARG B 270 SITE 2 AC5 8 VAL B 325 HIS B 328 ASP B 453 TYR B 630 CRYST1 109.026 109.026 158.835 90.00 90.00 120.00 P 32 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009172 0.005296 0.000000 0.00000 SCALE2 0.000000 0.010591 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006296 0.00000