PDB Short entry for 2JNG
HEADER    GENE REGULATION                         23-JAN-07   2JNG              
TITLE     SOLUTION STRUCTURE OF THE CUL7-CPH DOMAIN FROM HOMO SAPIENS; NORTHEAST
TITLE    2 STRUCTURAL GENOMICS CONSORTIUM TARGET HT1.                           
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: CULLIN-7;                                                  
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: SEQUENCE DATABASE RESIDUES 360-460;                        
COMPND   5 SYNONYM: CUL-7;                                                      
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: CUL7, KIAA0076;                                                
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR;                               
SOURCE   9 EXPRESSION_SYSTEM_VECTOR: PET 15B                                    
KEYWDS    P53 BINDING DOMAIN, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE     
KEYWDS   2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, GENE     
KEYWDS   3 REGULATION                                                           
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    A.LEMAK,L.KAUSTOV,J.LUKIN,S.DUAN,C.H.ARROWSMITH,NORTHEAST STRUCTURAL  
AUTHOR   2 GENOMICS CONSORTIUM (NESG)                                           
REVDAT   4   09-MAR-22 2JNG    1       REMARK SEQADV                            
REVDAT   3   24-FEB-09 2JNG    1       VERSN                                    
REVDAT   2   08-MAY-07 2JNG    1       JRNL                                     
REVDAT   1   27-FEB-07 2JNG    0                                                
JRNL        AUTH   L.KAUSTOV,J.LUKIN,A.LEMAK,S.DUAN,M.HO,R.DOHERTY,L.Z.PENN,    
JRNL        AUTH 2 C.H.ARROWSMITH                                               
JRNL        TITL   THE CONSERVED CPH DOMAINS OF CUL7 AND PARC ARE               
JRNL        TITL 2 PROTEIN-PROTEIN INTERACTION MODULES THAT BIND THE            
JRNL        TITL 3 TETRAMERIZATION DOMAIN OF P53                                
JRNL        REF    J.BIOL.CHEM.                  V. 282 11300 2007              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   17298945                                                     
JRNL        DOI    10.1074/JBC.M611297200                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.1, CNS 1.1                                     
REMARK   3   AUTHORS     : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ         
REMARK   3                 (CNS), BRUNGER, ADAMS, CLORE, GROS, NILGES AND       
REMARK   3                 READ (CNS)                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2JNG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JAN-07.                  
REMARK 100 THE DEPOSITION ID IS D_1000100052.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298.15                             
REMARK 210  PH                             : 7.4                                
REMARK 210  IONIC STRENGTH                 : 250                                
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 25 MM TRIS, 250 MM SODIUM          
REMARK 210                                   CHLORIDE, 55 MM H2O, 0.5 MM PMSF,  
REMARK 210                                   0.5 MM TCEP, 1 MM BENZAMIDINE,     
REMARK 210                                   90% H2O, 10% D2O                   
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 2D 1H-13C HSQC;    
REMARK 210                                   3D CBCA(CO)NH; 3D HNCO; 3D         
REMARK 210                                   HNCACB; 3D HBHA(CO)NH; 3D H(CCO)   
REMARK 210                                   NH; 3D HCCH-TOCSY; 3D 1H-15N       
REMARK 210                                   NOESY; 3D 1H-13C NOESY             
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ; 600 MHZ                   
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE, SPARKY 3.106, TALOS       
REMARK 210   METHOD USED                   : MOLECULAR DYNAMICS                 
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING A COMBINATION OF NOE      
REMARK 210  AND HN RESIDUAL DIPOLAR COUPLING DATA.                              
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-20                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     GLY A     1                                                      
REMARK 465     SER A     2                                                      
REMARK 465     HIS A     3                                                      
REMARK 465     ASP A    81                                                      
REMARK 465     ILE A    82                                                      
REMARK 465     GLU A    83                                                      
REMARK 465     ASP A    84                                                      
REMARK 465     MET A    85                                                      
REMARK 465     VAL A    86                                                      
REMARK 465     GLU A    87                                                      
REMARK 465     ALA A    88                                                      
REMARK 465     ASP A    89                                                      
REMARK 465     GLU A    90                                                      
REMARK 465     TYR A    91                                                      
REMARK 465     GLN A    92                                                      
REMARK 465     GLY A    93                                                      
REMARK 465     ALA A    94                                                      
REMARK 465     VAL A    95                                                      
REMARK 465     ALA A    96                                                      
REMARK 465     SER A    97                                                      
REMARK 465     ARG A    98                                                      
REMARK 465     VAL A    99                                                      
REMARK 465     LEU A   100                                                      
REMARK 465     GLY A   101                                                      
REMARK 465     ARG A   102                                                      
REMARK 465     ALA A   103                                                      
REMARK 465     LEU A   104                                                      
REMARK 465     PRO A   105                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   OD1  ASP A    41     HG   SER A    61              1.60            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 SER A   6       14.56    -68.36                                   
REMARK 500  1 GLU A  35     -124.66     60.85                                   
REMARK 500  1 VAL A  68     -155.81   -104.23                                   
REMARK 500  2 GLU A  35      -30.85     69.47                                   
REMARK 500  2 GLU A  36      -38.24   -163.46                                   
REMARK 500  2 LEU A  76      -66.94   -102.16                                   
REMARK 500  3 GLU A  35     -113.43     59.74                                   
REMARK 500  3 ASN A  50      -94.06     58.19                                   
REMARK 500  3 PHE A  78      138.34   -176.24                                   
REMARK 500  4 LEU A  22       96.56    -68.34                                   
REMARK 500  4 GLU A  35       -1.04     57.72                                   
REMARK 500  4 GLU A  36      -42.96    177.36                                   
REMARK 500  4 PHE A  78       19.37   -142.09                                   
REMARK 500  5 GLU A  36      -41.08   -173.45                                   
REMARK 500  6 SER A   6        1.28    -69.48                                   
REMARK 500  6 GLU A   7      -70.14    -74.50                                   
REMARK 500  6 PHE A   8     -158.49     53.86                                   
REMARK 500  6 PRO A  24      101.65    -49.62                                   
REMARK 500  6 GLU A  35      -71.80    -39.14                                   
REMARK 500  6 ASN A  50     -106.73     46.69                                   
REMARK 500  7 GLU A  35     -112.07     59.46                                   
REMARK 500  7 GLU A  79       19.47     57.73                                   
REMARK 500  8 GLU A  35      -26.22     73.53                                   
REMARK 500  8 GLU A  36      -38.50   -175.53                                   
REMARK 500  8 PHE A  78      -94.22   -138.25                                   
REMARK 500  8 GLU A  79      -63.46     65.75                                   
REMARK 500  9 PHE A   8     -178.18    -58.72                                   
REMARK 500  9 GLU A  35      -26.11     69.27                                   
REMARK 500  9 GLU A  36      -40.13   -167.48                                   
REMARK 500  9 ASN A  50      -39.60     72.66                                   
REMARK 500  9 VAL A  68     -155.02   -111.87                                   
REMARK 500  9 PHE A  78      -36.69   -166.65                                   
REMARK 500 10 LEU A  76      -71.36   -101.27                                   
REMARK 500 10 GLU A  79      -58.84     72.33                                   
REMARK 500 11 GLU A  35      -15.18     69.99                                   
REMARK 500 11 GLU A  36      -31.38    172.80                                   
REMARK 500 11 ASN A  50      -97.71     34.08                                   
REMARK 500 11 LEU A  76       42.08   -109.85                                   
REMARK 500 12 PRO A  24      107.92    -50.58                                   
REMARK 500 12 TYR A  34      108.51   -160.95                                   
REMARK 500 12 GLU A  35      -23.72     67.44                                   
REMARK 500 12 GLU A  36      -47.23   -169.07                                   
REMARK 500 12 GLN A  47      170.77    178.86                                   
REMARK 500 12 ASN A  50       -9.22     65.41                                   
REMARK 500 12 PRO A  54      105.47    -58.57                                   
REMARK 500 12 VAL A  68     -156.70   -106.47                                   
REMARK 500 13 GLU A  35     -112.25     55.84                                   
REMARK 500 13 ASN A  50       31.48    -76.15                                   
REMARK 500 13 LEU A  76       78.34   -114.15                                   
REMARK 500 14 GLU A  35      -12.30     63.43                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      75 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: HT1   RELATED DB: TARGETDB                               
DBREF  2JNG A    5   105  UNP    Q14999   CUL7_HUMAN     360    460             
SEQADV 2JNG GLY A    1  UNP  Q14999              CLONING ARTIFACT               
SEQADV 2JNG SER A    2  UNP  Q14999              CLONING ARTIFACT               
SEQADV 2JNG HIS A    3  UNP  Q14999              CLONING ARTIFACT               
SEQADV 2JNG MET A    4  UNP  Q14999              CLONING ARTIFACT               
SEQRES   1 A  105  GLY SER HIS MET ARG SER GLU PHE ALA SER GLY ASN THR          
SEQRES   2 A  105  TYR ALA LEU TYR VAL ARG ASP THR LEU GLN PRO GLY MET          
SEQRES   3 A  105  ARG VAL ARG MET LEU ASP ASP TYR GLU GLU ILE SER ALA          
SEQRES   4 A  105  GLY ASP GLU GLY GLU PHE ARG GLN SER ASN ASN GLY VAL          
SEQRES   5 A  105  PRO PRO VAL GLN VAL PHE TRP GLU SER THR GLY ARG THR          
SEQRES   6 A  105  TYR TRP VAL HIS TRP HIS MET LEU GLU ILE LEU GLY PHE          
SEQRES   7 A  105  GLU GLU ASP ILE GLU ASP MET VAL GLU ALA ASP GLU TYR          
SEQRES   8 A  105  GLN GLY ALA VAL ALA SER ARG VAL LEU GLY ARG ALA LEU          
SEQRES   9 A  105  PRO                                                          
HELIX    1   1 MET A    4  PHE A    8  5                                   5    
HELIX    2   2 GLY A   11  LEU A   22  1                                  12    
SHEET    1   A 5 ARG A  64  HIS A  69  0                                        
SHEET    2   A 5 PRO A  54  TRP A  59 -1  N  VAL A  57   O  TYR A  66           
SHEET    3   A 5 GLU A  42  SER A  48 -1  N  GLU A  44   O  PHE A  58           
SHEET    4   A 5 ARG A  27  MET A  30 -1  N  VAL A  28   O  GLY A  43           
SHEET    5   A 5 LEU A  73  ILE A  75 -1  O  GLU A  74   N  ARG A  29           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000