PDB Short entry for 2JR7
HEADER    METAL BINDING PROTEIN                   21-JUN-07   2JR7              
TITLE     SOLUTION STRUCTURE OF HUMAN DESR1                                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DPH3 HOMOLOG;                                              
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: CSL-TYPE ZINC FINGER-CONTAINING PROTEIN 2, DELGEF-          
COMPND   5 INTERACTING PROTEIN 1, DELGIP1;                                      
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: DPH3, DESR1, ZCSL2;                                            
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)GOLD;                             
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR;                               
SOURCE  10 EXPRESSION_SYSTEM_VECTOR: PET22B (+)                                 
KEYWDS    DESR1, CSL ZINC FINGER, METAL BINDING PROTEIN                         
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    F.WU,J.WU,Y.SHI                                                       
REVDAT   3   19-FEB-20 2JR7    1       REMARK SEQADV                            
REVDAT   2   24-FEB-09 2JR7    1       VERSN                                    
REVDAT   1   25-MAR-08 2JR7    0                                                
JRNL        AUTH   F.WU,J.ZHANG,J.SUN,H.HUANG,P.JI,W.CHU,M.YU,F.YANG,Z.WU,J.WU, 
JRNL        AUTH 2 Y.SHI                                                        
JRNL        TITL   SOLUTION STRUCTURE OF HUMAN DESR1, A CSL ZINC-BINDING        
JRNL        TITL 2 PROTEIN                                                      
JRNL        REF    PROTEINS                      V.  71   514 2008              
JRNL        REFN                   ISSN 0887-3585                               
JRNL        PMID   18214955                                                     
JRNL        DOI    10.1002/PROT.21915                                           
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.1, CNS 1.1                                     
REMARK   3   AUTHORS     : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ         
REMARK   3                 (CNS), BRUNGER, ADAMS, CLORE, GROS, NILGES AND       
REMARK   3                 READ (CNS)                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2JR7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-07.                  
REMARK 100 THE DEPOSITION ID IS D_1000100187.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 295                                
REMARK 210  PH                             : 7.0                                
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : 1 ATM                              
REMARK 210  SAMPLE CONTENTS                : 1.5 MM [U-99% 13C; U-99% 15N]      
REMARK 210                                   PROTEIN, 20 MM TRIS, 50 MM         
REMARK 210                                   SODIUM CHLORIDE, 14 MM BETA-       
REMARK 210                                   MERCAPTOETHANOL, 90% H2O/10% D2O;  
REMARK 210                                   1.5 MM [U-99% 13C; U-99% 15N]      
REMARK 210                                   PROTEIN, 20 MM TRIS, 50 MM         
REMARK 210                                   SODIUM CHLORIDE, 14 MM BETA-       
REMARK 210                                   MERCAPTOETHANOL, 99.99% D2O        
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D 1H-15N NOESY; 3D 1H-13C NOESY   
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ                            
REMARK 210  SPECTROMETER MODEL             : DMX                                
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE 2.2, SPARKY 3, CSI 1.0,    
REMARK 210                                   MOLMOL 2K.2, TALOS                 
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 200                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-20                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     HIS A    85                                                      
REMARK 465     HIS A    86                                                      
REMARK 465     HIS A    87                                                      
REMARK 465     HIS A    88                                                      
REMARK 465     HIS A    89                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ALA A   2      -50.26   -132.30                                   
REMARK 500  1 PHE A   4      175.54     60.23                                   
REMARK 500  1 HIS A   5      -63.51    -91.01                                   
REMARK 500  1 ASP A   6      137.28   -170.51                                   
REMARK 500  1 SER A  19       32.75   -149.11                                   
REMARK 500  1 GLU A  20       73.49     50.25                                   
REMARK 500  1 GLU A  43       79.22    -67.85                                   
REMARK 500  1 ASP A  44       39.39    -96.34                                   
REMARK 500  1 SER A  50      -68.03   -109.84                                   
REMARK 500  1 PRO A  71      174.83    -59.90                                   
REMARK 500  1 ALA A  75     -179.72     62.35                                   
REMARK 500  1 LYS A  81       35.11   -141.86                                   
REMARK 500  2 ALA A   2      -58.60   -127.52                                   
REMARK 500  2 SER A  19       27.73   -142.87                                   
REMARK 500  2 ASP A  44       35.83    -89.66                                   
REMARK 500  2 GLU A  68       31.81    -99.81                                   
REMARK 500  2 VAL A  70      141.88     67.55                                   
REMARK 500  2 ALA A  75      160.27     67.58                                   
REMARK 500  2 LEU A  79       34.70   -150.79                                   
REMARK 500  2 LYS A  81       85.44     59.73                                   
REMARK 500  3 SER A  19       28.23   -148.83                                   
REMARK 500  3 GLU A  20       82.28     53.74                                   
REMARK 500  3 ASP A  44       41.92    -97.33                                   
REMARK 500  3 SER A  50      -75.39    -83.02                                   
REMARK 500  3 PRO A  73      172.38    -58.94                                   
REMARK 500  3 LEU A  79      128.57   -172.85                                   
REMARK 500  4 ALA A   2      -70.43   -131.47                                   
REMARK 500  4 VAL A   3       26.36   -146.51                                   
REMARK 500  4 SER A  19       32.39   -151.44                                   
REMARK 500  4 GLU A  20       70.49     51.65                                   
REMARK 500  4 ASN A  31      131.50     73.37                                   
REMARK 500  4 GLU A  43       80.22    -68.02                                   
REMARK 500  4 ASP A  44       38.72    -95.05                                   
REMARK 500  4 PRO A  49       36.62    -84.60                                   
REMARK 500  4 SER A  50      -64.11   -155.51                                   
REMARK 500  4 SER A  66       28.36   -141.36                                   
REMARK 500  4 PRO A  71      172.30    -57.85                                   
REMARK 500  4 ALA A  75      100.72     66.59                                   
REMARK 500  4 ASN A  76       38.71    -95.00                                   
REMARK 500  4 LEU A  79       63.67   -154.84                                   
REMARK 500  4 LYS A  81       92.54     60.71                                   
REMARK 500  5 ASP A  30     -167.25    -79.35                                   
REMARK 500  5 ASP A  44       41.78    -97.66                                   
REMARK 500  5 LEU A  79       40.59   -163.35                                   
REMARK 500  5 LYS A  81       25.79   -145.70                                   
REMARK 500  5 LEU A  82      152.36     69.00                                   
REMARK 500  6 ALA A   2      -66.00   -168.96                                   
REMARK 500  6 PHE A   4     -179.95     60.35                                   
REMARK 500  6 HIS A   5      -61.63    -97.28                                   
REMARK 500  6 ASP A  44       41.79    -97.44                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     192 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A  85  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A  26   SG                                                     
REMARK 620 2 CYS A  28   SG  109.0                                              
REMARK 620 3 CYS A  48   SG  110.0 110.8                                        
REMARK 620 4 CYS A  51   SG  108.8 109.1 109.1                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 85                   
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 15377   RELATED DB: BMRB                                 
DBREF  2JR7 A    1    81  UNP    Q96FX2   DPH3_HUMAN       1     81             
SEQADV 2JR7 SER A   66  UNP  Q96FX2    CYS    66 ENGINEERED                     
SEQADV 2JR7 LEU A   82  UNP  Q96FX2              EXPRESSION TAG                 
SEQADV 2JR7 GLU A   83  UNP  Q96FX2              EXPRESSION TAG                 
SEQADV 2JR7 HIS A   84  UNP  Q96FX2              EXPRESSION TAG                 
SEQADV 2JR7 HIS A   85  UNP  Q96FX2              EXPRESSION TAG                 
SEQADV 2JR7 HIS A   86  UNP  Q96FX2              EXPRESSION TAG                 
SEQADV 2JR7 HIS A   87  UNP  Q96FX2              EXPRESSION TAG                 
SEQADV 2JR7 HIS A   88  UNP  Q96FX2              EXPRESSION TAG                 
SEQADV 2JR7 HIS A   89  UNP  Q96FX2              EXPRESSION TAG                 
SEQRES   1 A   89  MET ALA VAL PHE HIS ASP GLU VAL GLU ILE GLU ASP PHE          
SEQRES   2 A   89  GLN TYR ASP GLU ASP SER GLU THR TYR PHE TYR PRO CYS          
SEQRES   3 A   89  PRO CYS GLY ASP ASN PHE SER ILE THR LYS GLU ASP LEU          
SEQRES   4 A   89  GLU ASN GLY GLU ASP VAL ALA THR CYS PRO SER CYS SER          
SEQRES   5 A   89  LEU ILE ILE LYS VAL ILE TYR ASP LYS ASP GLN PHE VAL          
SEQRES   6 A   89  SER GLY GLU THR VAL PRO ALA PRO SER ALA ASN LYS GLU          
SEQRES   7 A   89  LEU VAL LYS LEU GLU HIS HIS HIS HIS HIS HIS                  
HET     ZN  A  85       1                                                       
HETNAM      ZN ZINC ION                                                         
FORMUL   2   ZN    ZN 2+                                                        
HELIX    1   1 LYS A   36  GLY A   42  1                                   7    
HELIX    2   2 ASP A   60  VAL A   65  1                                   6    
SHEET    1   A 3 GLU A   7  GLU A   9  0                                        
SHEET    2   A 3 ILE A  54  ILE A  58  1  O  LYS A  56   N  VAL A   8           
SHEET    3   A 3 VAL A  45  THR A  47 -1  N  ALA A  46   O  ILE A  55           
SHEET    1   B 3 GLN A  14  TYR A  15  0                                        
SHEET    2   B 3 THR A  21  PRO A  25 -1  O  PHE A  23   N  GLN A  14           
SHEET    3   B 3 ASN A  31  THR A  35 -1  O  ILE A  34   N  TYR A  22           
LINK         SG  CYS A  26                ZN    ZN A  85     1555   1555  2.42  
LINK         SG  CYS A  28                ZN    ZN A  85     1555   1555  2.40  
LINK         SG  CYS A  48                ZN    ZN A  85     1555   1555  2.40  
LINK         SG  CYS A  51                ZN    ZN A  85     1555   1555  2.42  
SITE     1 AC1  4 CYS A  26  CYS A  28  CYS A  48  CYS A  51                    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000