PDB Short entry for 2JS2 HEADER SIGNALING PROTEIN 29-JUN-07 2JS2 TITLE SOLUTION STRUCTURE OF FIRST SH3 DOMAIN OF ADAPTOR NCK COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOPLASMIC PROTEIN NCK1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 1; COMPND 5 SYNONYM: NCK ADAPTOR PROTEIN 1, SH2/SH3 ADAPTOR PROTEIN COMPND 6 NCK-ALPHA; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NCK1, NCK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGEV2 KEYWDS SH3 DOMAIN, ADAPTOR, SIGNALING, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.J.HAKE,K.CHOOWONGKOMON,C.R.CARLIN,F.D.SONNICHSEN REVDAT 3 24-FEB-09 2JS2 1 VERSN REVDAT 2 06-MAY-08 2JS2 1 JRNL REVDAT 1 26-FEB-08 2JS2 0 JRNL AUTH M.J.HAKE,K.CHOOWONGKOMON,O.KOSTENKO,C.R.CARLIN, JRNL AUTH 2 F.D.SONNICHSEN JRNL TITL SPECIFICITY DETERMINANTS OF A NOVEL NCK JRNL TITL 2 INTERACTION WITH THE JUXTAMEMBRANE DOMAIN OF THE JRNL TITL 3 EPIDERMAL GROWTH FACTOR RECEPTOR. JRNL REF BIOCHEMISTRY V. 47 3096 2008 JRNL REFN ISSN 0006-2960 JRNL PMID 18269246 JRNL DOI 10.1021/BI701549A REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JS2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-07. REMARK 100 THE RCSB ID CODE IS RCSB100218. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.1 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5-1.0 MM [U-99% 13C; U-99% REMARK 210 15N] NCK1-1, 20 MM SODIUM REMARK 210 PHOSPHATE, 100 MM SODIUM REMARK 210 CHLORIDE, 2 MM SODIUM AZIDE, 1 REMARK 210 MM EDTA, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY, 3D 1H-13C REMARK 210 NOESY, 2D 1H-1H NOESY, 2D 1H- REMARK 210 15N HSQC, 2D 1H-13C HSQC, 3D REMARK 210 HNCO, 3D HNCACB, 3D CBCA(CO) REMARK 210 NH, 3D H(CCO)NH, 3D HCCH- REMARK 210 TOCSY, 3D HNHB REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA, AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN, BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1, NMRVIEW 5.2.1, REMARK 210 NMRPIPE, CNS 1.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 34 -61.46 -108.30 REMARK 500 1 ASN A 48 28.77 48.71 REMARK 500 2 SER A 39 -93.17 42.18 REMARK 500 2 ARG A 60 -167.07 -110.03 REMARK 500 3 ASP A 36 59.61 -99.98 REMARK 500 3 LYS A 38 -154.87 -147.99 REMARK 500 3 ASN A 48 -20.72 74.99 REMARK 500 3 ASN A 62 143.39 74.17 REMARK 500 4 ARG A 60 -120.10 -92.25 REMARK 500 5 ALA A 4 -70.87 -87.92 REMARK 500 5 GLU A 5 98.72 -160.05 REMARK 500 5 SER A 39 -162.07 67.92 REMARK 500 5 ARG A 60 -151.59 -75.03 REMARK 500 5 ASN A 62 116.50 -171.13 REMARK 500 6 LYS A 38 -84.35 -160.43 REMARK 500 6 TRP A 40 100.52 66.18 REMARK 500 6 ARG A 60 -139.04 -83.43 REMARK 500 7 SER A 39 88.69 66.68 REMARK 500 7 TRP A 40 -172.47 60.79 REMARK 500 7 ASN A 62 158.76 72.77 REMARK 500 8 ALA A 4 86.30 58.41 REMARK 500 8 LYS A 38 -126.70 -176.46 REMARK 500 8 TRP A 40 93.08 66.31 REMARK 500 9 SER A 2 79.82 -119.75 REMARK 500 9 MET A 3 35.79 -146.56 REMARK 500 9 SER A 39 -123.79 51.21 REMARK 500 9 ASN A 48 -17.06 74.88 REMARK 500 10 MET A 3 -71.17 -83.03 REMARK 500 10 ALA A 4 -64.45 -166.12 REMARK 500 10 VAL A 7 99.70 -67.66 REMARK 500 10 ASN A 28 35.07 70.26 REMARK 500 10 TRP A 40 90.99 70.45 REMARK 500 11 SER A 2 -59.92 -152.25 REMARK 500 11 MET A 3 93.18 62.84 REMARK 500 11 GLN A 18 -70.29 -82.54 REMARK 500 11 SER A 39 -73.23 69.57 REMARK 500 12 LYS A 38 -74.76 -179.50 REMARK 500 12 ASN A 48 26.26 49.80 REMARK 500 13 SER A 2 -171.22 -175.20 REMARK 500 13 MET A 3 98.71 -63.83 REMARK 500 13 ASP A 36 74.41 -113.34 REMARK 500 13 SER A 37 5.09 -65.91 REMARK 500 13 LYS A 38 -62.60 76.37 REMARK 500 13 TRP A 40 133.97 71.28 REMARK 500 13 ASN A 48 -6.36 74.04 REMARK 500 14 MET A 3 -60.70 70.55 REMARK 500 15 ALA A 4 -64.73 -149.48 REMARK 500 15 LYS A 38 -74.66 -176.27 REMARK 500 15 TRP A 40 97.72 64.32 REMARK 500 15 ASN A 62 68.87 -151.61 REMARK 500 16 ALA A 4 -48.34 -177.83 REMARK 500 16 VAL A 7 95.30 -69.05 REMARK 500 16 SER A 39 80.43 57.17 REMARK 500 16 TRP A 40 -175.39 65.43 REMARK 500 17 LYS A 38 -91.88 -172.52 REMARK 500 17 ASN A 62 88.68 76.29 REMARK 500 18 ASP A 36 64.85 -103.15 REMARK 500 18 SER A 37 5.34 -67.52 REMARK 500 18 LYS A 38 -69.63 73.59 REMARK 500 18 TRP A 40 113.33 70.92 REMARK 500 18 ARG A 60 -159.10 -106.92 REMARK 500 19 ASN A 28 28.83 48.95 REMARK 500 19 SER A 39 -83.36 68.17 REMARK 500 19 ASN A 62 -106.36 -86.72 REMARK 500 20 ALA A 4 -74.33 -144.69 REMARK 500 20 ASP A 36 66.03 -119.28 REMARK 500 20 LYS A 38 -84.74 -172.66 REMARK 500 20 TRP A 40 99.12 65.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JS0 RELATED DB: PDB REMARK 900 'SPECIFICITY DETERMINANTS OF A NOVEL NCK INTERACTION WITH REMARK 900 THE JUXTAMEMBRANE DOMAIN OF THE EPIDERMAL GROWTH FACTOR REMARK 900 RECEPTOR' DBREF 2JS2 A 3 63 UNP P16333 NCK1_HUMAN 1 61 SEQADV 2JS2 GLY A 1 UNP P16333 EXPRESSION TAG SEQADV 2JS2 SER A 2 UNP P16333 EXPRESSION TAG SEQRES 1 A 63 GLY SER MET ALA GLU GLU VAL VAL VAL VAL ALA LYS PHE SEQRES 2 A 63 ASP TYR VAL ALA GLN GLN GLU GLN GLU LEU ASP ILE LYS SEQRES 3 A 63 LYS ASN GLU ARG LEU TRP LEU LEU ASP ASP SER LYS SER SEQRES 4 A 63 TRP TRP ARG VAL ARG ASN SER MET ASN LYS THR GLY PHE SEQRES 5 A 63 VAL PRO SER ASN TYR VAL GLU ARG LYS ASN SER SHEET 1 A 5 THR A 50 VAL A 53 0 SHEET 2 A 5 TRP A 41 ARG A 44 -1 N TRP A 41 O VAL A 53 SHEET 3 A 5 ARG A 30 ASP A 35 -1 N TRP A 32 O ARG A 44 SHEET 4 A 5 VAL A 8 ALA A 11 -1 N VAL A 9 O LEU A 31 SHEET 5 A 5 VAL A 58 ARG A 60 -1 O GLU A 59 N VAL A 10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000