PDB Short entry for 2KJY HEADER SIGNALING PROTEIN 11-JUN-09 2KJY TITLE MYPT1(658-714) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 658- 714; COMPND 5 SYNONYM: MYOSIN PHOSPHATASE-TARGETING SUBUNIT 1, MYOSIN PHOSPHATASE COMPND 6 TARGET SUBUNIT 1, PROTEIN PHOSPHATASE MYOSIN-BINDING SUBUNIT; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPP1R12A, MBS, MYPT1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS MYPT1, PHOSPHORYLATION, PROTEIN PHOSPHATASE 1, MYOSIN PHOSPHATASE, KEYWDS 2 ALTERNATIVE SPLICING, ANK REPEAT, CYTOPLASM, PHOSPHOPROTEIN, KEYWDS 3 POLYMORPHISM, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.MORI,R.IWAOKA,M.ETO,S.OHKI REVDAT 3 16-MAR-22 2KJY 1 REMARK SEQADV REVDAT 2 29-SEP-09 2KJY 1 JRNL REVDAT 1 08-SEP-09 2KJY 0 JRNL AUTH S.MORI,R.IWAOKA,M.ETO,S.Y.OHKI JRNL TITL SOLUTION STRUCTURE OF THE INHIBITORY PHOSPHORYLATION DOMAIN JRNL TITL 2 OF MYOSIN PHOSPHATASE TARGETING SUBUNIT 1 JRNL REF PROTEINS V. 77 732 2009 JRNL REFN ISSN 0887-3585 JRNL PMID 19701943 JRNL DOI 10.1002/PROT.22529 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH 2.1, X-PLOR NIH 2.1 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA, CLORE (X-PLOR REMARK 3 NIH), SCHWIETERS, KUSZEWSKI, TJANDRA, CLORE (X- REMARK 3 PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KJY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000101213. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 285 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : KCL @100 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.6-1.0MM MYPT1(658-714)-1, 0.6 REMARK 210 -1.0MM [U-99% 15N] MYPT1(658-714) REMARK 210 -2, 0.6-1.0MM [U-99% 13C; U-99% REMARK 210 15N] MYPT1(658-714)-3, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D C(CO)NH; 3D H(CCO) REMARK 210 NH; 3D HCCH-TOCSY; 3D 1H-15N REMARK 210 NOESY; 2D 1H-1H NOESY; 3D 1H-15N REMARK 210 TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 16 38.00 -143.57 REMARK 500 1 GLN A 43 -178.47 178.13 REMARK 500 1 VAL A 45 -12.30 70.26 REMARK 500 1 LEU A 47 -53.17 -140.18 REMARK 500 1 ILE A 57 160.63 57.95 REMARK 500 1 ARG A 59 -160.29 -116.79 REMARK 500 2 SER A 4 45.22 -161.97 REMARK 500 2 GLN A 43 -77.37 62.94 REMARK 500 2 VAL A 45 -44.12 -130.31 REMARK 500 2 ILE A 57 79.73 52.36 REMARK 500 3 SER A 4 42.52 -153.80 REMARK 500 3 TYR A 15 -30.75 -38.73 REMARK 500 3 LEU A 16 42.69 -141.33 REMARK 500 3 VAL A 45 -10.97 69.59 REMARK 500 3 LEU A 47 -58.97 -140.94 REMARK 500 3 ARG A 59 -57.25 -141.34 REMARK 500 4 MET A 3 -158.96 -70.94 REMARK 500 4 LEU A 16 30.09 -150.40 REMARK 500 4 GLN A 43 -157.46 61.57 REMARK 500 4 VAL A 45 -12.08 71.27 REMARK 500 4 LEU A 47 -52.21 -141.50 REMARK 500 4 ARG A 59 -88.11 54.44 REMARK 500 5 GLN A 43 -178.42 178.14 REMARK 500 5 VAL A 45 -11.42 69.49 REMARK 500 5 THR A 46 38.95 36.49 REMARK 500 5 LEU A 47 -43.95 -139.99 REMARK 500 6 MET A 3 -177.92 53.07 REMARK 500 6 LEU A 16 40.24 -143.25 REMARK 500 6 GLN A 43 -160.61 170.65 REMARK 500 6 VAL A 45 -50.54 -150.47 REMARK 500 6 ILE A 57 94.70 52.92 REMARK 500 6 ARG A 59 -73.09 -62.32 REMARK 500 7 SER A 4 35.73 -155.25 REMARK 500 7 GLN A 43 -139.39 61.70 REMARK 500 7 ARG A 59 -162.64 54.31 REMARK 500 8 MET A 3 -176.53 52.29 REMARK 500 8 SER A 4 39.26 -149.33 REMARK 500 8 TYR A 15 -31.55 -39.51 REMARK 500 8 GLN A 43 -162.14 59.30 REMARK 500 8 VAL A 45 -12.22 71.18 REMARK 500 8 THR A 46 29.39 45.47 REMARK 500 8 LEU A 47 -60.92 -143.15 REMARK 500 8 ARG A 59 87.08 52.53 REMARK 500 9 LEU A 16 43.18 -148.08 REMARK 500 9 GLN A 43 -163.33 55.14 REMARK 500 9 VAL A 45 -12.61 70.67 REMARK 500 9 LEU A 47 -45.58 -132.37 REMARK 500 9 ILE A 57 48.04 -109.84 REMARK 500 9 ARG A 59 52.03 -167.82 REMARK 500 10 MET A 3 75.14 52.18 REMARK 500 REMARK 500 THIS ENTRY HAS 105 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 9 0.22 SIDE CHAIN REMARK 500 1 ARG A 11 0.32 SIDE CHAIN REMARK 500 1 ARG A 12 0.28 SIDE CHAIN REMARK 500 1 ARG A 13 0.21 SIDE CHAIN REMARK 500 1 ARG A 20 0.23 SIDE CHAIN REMARK 500 1 ARG A 28 0.23 SIDE CHAIN REMARK 500 1 ARG A 31 0.32 SIDE CHAIN REMARK 500 1 ARG A 33 0.32 SIDE CHAIN REMARK 500 1 ARG A 36 0.23 SIDE CHAIN REMARK 500 1 ARG A 39 0.32 SIDE CHAIN REMARK 500 1 ARG A 40 0.25 SIDE CHAIN REMARK 500 1 ARG A 59 0.32 SIDE CHAIN REMARK 500 2 ARG A 9 0.29 SIDE CHAIN REMARK 500 2 ARG A 11 0.23 SIDE CHAIN REMARK 500 2 ARG A 12 0.27 SIDE CHAIN REMARK 500 2 ARG A 13 0.27 SIDE CHAIN REMARK 500 2 ARG A 20 0.30 SIDE CHAIN REMARK 500 2 ARG A 28 0.24 SIDE CHAIN REMARK 500 2 ARG A 31 0.22 SIDE CHAIN REMARK 500 2 ARG A 33 0.25 SIDE CHAIN REMARK 500 2 ARG A 36 0.26 SIDE CHAIN REMARK 500 2 ARG A 39 0.24 SIDE CHAIN REMARK 500 2 ARG A 40 0.29 SIDE CHAIN REMARK 500 2 ARG A 59 0.22 SIDE CHAIN REMARK 500 3 ARG A 9 0.23 SIDE CHAIN REMARK 500 3 ARG A 11 0.26 SIDE CHAIN REMARK 500 3 ARG A 12 0.31 SIDE CHAIN REMARK 500 3 ARG A 13 0.32 SIDE CHAIN REMARK 500 3 ARG A 20 0.30 SIDE CHAIN REMARK 500 3 ARG A 28 0.32 SIDE CHAIN REMARK 500 3 ARG A 31 0.29 SIDE CHAIN REMARK 500 3 ARG A 33 0.30 SIDE CHAIN REMARK 500 3 ARG A 36 0.31 SIDE CHAIN REMARK 500 3 ARG A 39 0.32 SIDE CHAIN REMARK 500 3 ARG A 40 0.32 SIDE CHAIN REMARK 500 3 ARG A 59 0.32 SIDE CHAIN REMARK 500 4 ARG A 9 0.32 SIDE CHAIN REMARK 500 4 ARG A 11 0.32 SIDE CHAIN REMARK 500 4 ARG A 12 0.23 SIDE CHAIN REMARK 500 4 ARG A 13 0.28 SIDE CHAIN REMARK 500 4 ARG A 20 0.28 SIDE CHAIN REMARK 500 4 ARG A 28 0.29 SIDE CHAIN REMARK 500 4 ARG A 31 0.21 SIDE CHAIN REMARK 500 4 ARG A 33 0.24 SIDE CHAIN REMARK 500 4 ARG A 36 0.30 SIDE CHAIN REMARK 500 4 ARG A 39 0.31 SIDE CHAIN REMARK 500 4 ARG A 40 0.26 SIDE CHAIN REMARK 500 4 ARG A 59 0.28 SIDE CHAIN REMARK 500 5 ARG A 9 0.23 SIDE CHAIN REMARK 500 5 ARG A 11 0.25 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 240 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2KJY A 4 60 UNP O14974 MYPT1_HUMAN 658 714 SEQADV 2KJY GLY A 1 UNP O14974 EXPRESSION TAG SEQADV 2KJY PRO A 2 UNP O14974 EXPRESSION TAG SEQADV 2KJY MET A 3 UNP O14974 EXPRESSION TAG SEQRES 1 A 60 GLY PRO MET SER THR THR GLU VAL ARG GLU ARG ARG ARG SEQRES 2 A 60 SER TYR LEU THR PRO VAL ARG ASP GLU GLU SER GLU SER SEQRES 3 A 60 GLN ARG LYS ALA ARG SER ARG GLN ALA ARG GLN SER ARG SEQRES 4 A 60 ARG SER THR GLN GLY VAL THR LEU THR ASP LEU GLN GLU SEQRES 5 A 60 ALA GLU LYS THR ILE GLY ARG SER HELIX 1 1 SER A 4 TYR A 15 1 12 HELIX 2 2 LEU A 16 PRO A 18 5 3 HELIX 3 3 VAL A 19 GLN A 43 1 25 HELIX 4 4 LEU A 47 ILE A 57 1 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000