PDB Short entry for 2KLQ
HEADER    REPLICATION                             08-JUL-09   2KLQ              
TITLE     THE SOLUTION STRUCTURE OF CBD OF HUMAN MCM6                           
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA REPLICATION LICENSING FACTOR MCM6;                     
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: RESIDUES 708-821;                                          
COMPND   5 SYNONYM: CBD, P105MCM;                                               
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR;                               
SOURCE   8 EXPRESSION_SYSTEM_VECTOR: PET-28A                                    
KEYWDS    DNA REPLICATION, PRE-RC, MCM6, CDT1, CBD STRUCTURE, ATP-BINDING, CELL 
KEYWDS   2 CYCLE, DNA-BINDING, NUCLEOTIDE-BINDING, NUCLEUS, PHOSPHOPROTEIN,     
KEYWDS   3 POLYMORPHISM, TRANSCRIPTION, TRANSCRIPTION REGULATION, REPLICATION   
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    C.LIU                                                                 
REVDAT   2   02-JUN-10 2KLQ    1       JRNL                                     
REVDAT   1   02-MAR-10 2KLQ    0                                                
JRNL        AUTH   Z.WEI,C.LIU,X.WU,N.XU,B.ZHOU,C.LIANG,G.ZHU                   
JRNL        TITL   CHARACTERIZATION AND STRUCTURE DETERMINATION OF THE CDT1     
JRNL        TITL 2 BINDING DOMAIN OF HUMAN MINICHROMOSOME MAINTENANCE (MCM) 6   
JRNL        REF    J.BIOL.CHEM.                  V. 285 12469 2010              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   20202939                                                     
JRNL        DOI    10.1074/JBC.C109.094599                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CYANA 2.1                                            
REMARK   3   AUTHORS     : GUNTERT, MUMENTHALER AND WUTHRICH                    
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: RECALCULATED IN CNS,WATER REFINEMENT      
REMARK   4                                                                      
REMARK   4 2KLQ COMPLIES WITH FORMAT V. 3.20, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUL-09.                  
REMARK 100 THE RCSB ID CODE IS RCSB101277.                                      
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 310                                
REMARK 210  PH                             : 6.5                                
REMARK 210  IONIC STRENGTH                 : 0.5                                
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.5 MM [U-100% 13C; U-100% 15N]    
REMARK 210                                   CBD,MES,EDTA,GLYCEROL,NACL-1, 90%  
REMARK 210                                   H2O/10% D2O; 0.5 MM [U-100% 13C;   
REMARK 210                                   U-100% 15N] CBD,MES,EDTA,          
REMARK 210                                   GLYCEROL,NACL-2, 100% D2O; 0.5 MM  
REMARK 210                                   CBD,MES,EDTA,GLYCEROL,NACL-3,      
REMARK 210                                   100% D2O                           
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 2D 1H-13C HSQC;    
REMARK 210                                   3D CBCA(CO)NH; 3D HNCACB; 3D       
REMARK 210                                   HNCO; 3D H(CCO)NH; 3D C(CO)NH; 3D  
REMARK 210                                   HCCH-TOCSY; 3D HCCH-COSY; 3D       
REMARK 210                                   HBHA(CO)NH; 3D 1H-15N NOESY; 3D    
REMARK 210                                   1H-13C NOESY; 2D 1H-1H NOESY       
REMARK 210  SPECTROMETER FIELD STRENGTH    : 750 MHZ; 500 MHZ                   
REMARK 210  SPECTROMETER MODEL             : INOVA                              
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : CYANA 2.1                          
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 300                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : QUALITY                            
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500  HH21  ARG A   779     OD2  ASP A   784              1.60            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 SER A 712       85.21     63.99                                   
REMARK 500  1 ARG A 714       93.39    -61.92                                   
REMARK 500  1 LEU A 715      -44.24    171.24                                   
REMARK 500  1 GLU A 738      -74.31   -125.88                                   
REMARK 500  1 ASP A 739      -86.80   -148.87                                   
REMARK 500  1 GLU A 740       60.69   -166.41                                   
REMARK 500  1 SER A 741      -69.77     68.00                                   
REMARK 500  1 ALA A 742     -162.03     37.13                                   
REMARK 500  1 LEU A 743     -159.41     68.84                                   
REMARK 500  1 LEU A 790      -71.93   -108.64                                   
REMARK 500  1 THR A 791      -93.25    -75.85                                   
REMARK 500  1 GLN A 792      -31.96    177.42                                   
REMARK 500  1 TYR A 810     -107.46     68.32                                   
REMARK 500  2 LEU A 713       90.09     58.85                                   
REMARK 500  2 SER A 802      110.91     67.53                                   
REMARK 500  2 PRO A 809      178.78    -59.10                                   
REMARK 500  2 TYR A 817     -177.93     64.70                                   
REMARK 500  3 ALA A 711       92.75     71.33                                   
REMARK 500  3 ARG A 714      -37.60   -177.62                                   
REMARK 500  3 LEU A 715      -79.60   -107.17                                   
REMARK 500  3 PHE A 717       21.06   -151.82                                   
REMARK 500  3 ASP A 739      -52.89     71.50                                   
REMARK 500  3 ALA A 742      107.12   -161.51                                   
REMARK 500  3 LEU A 790      -90.49    -81.99                                   
REMARK 500  3 LYS A 796      -64.76   -124.57                                   
REMARK 500  3 GLU A 800      -53.16     68.17                                   
REMARK 500  3 GLU A 806      -93.41    -88.85                                   
REMARK 500  3 PRO A 809      -85.77    -46.72                                   
REMARK 500  3 ASN A 816       87.66     66.08                                   
REMARK 500  4 ASP A 739      -38.08     70.06                                   
REMARK 500  4 LEU A 743     -151.93   -108.83                                   
REMARK 500  4 HIS A 782      -75.18   -106.01                                   
REMARK 500  4 ALA A 793      121.69   -175.45                                   
REMARK 500  4 ASN A 816      -41.76    175.64                                   
REMARK 500  4 TYR A 817     -163.87     67.61                                   
REMARK 500  5 LEU A 713      -70.04     64.00                                   
REMARK 500  5 ASP A 739      -50.07     72.09                                   
REMARK 500  5 HIS A 782      -53.97   -135.17                                   
REMARK 500  5 LEU A 795      -70.97    -67.32                                   
REMARK 500  5 GLU A 806      -72.69    -52.29                                   
REMARK 500  5 LEU A 819     -155.64    -95.90                                   
REMARK 500  6 ARG A 714      -47.32   -173.14                                   
REMARK 500  6 PHE A 717       69.83   -109.21                                   
REMARK 500  6 GLU A 738      -73.78   -127.09                                   
REMARK 500  6 ASP A 739      -62.23    171.77                                   
REMARK 500  6 GLU A 740       89.15   -153.25                                   
REMARK 500  6 ALA A 742      107.14     63.24                                   
REMARK 500  6 THR A 799      118.97     79.14                                   
REMARK 500  6 SER A 802     -175.00     64.95                                   
REMARK 500  6 ASN A 816      -77.37    -61.05                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     186 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  1 ARG A 745         0.09    SIDE CHAIN                              
REMARK 500  4 ARG A 722         0.07    SIDE CHAIN                              
REMARK 500 14 ARG A 722         0.08    SIDE CHAIN                              
REMARK 500 18 ARG A 722         0.09    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CHIRAL CENTERS                                             
REMARK 500                                                                      
REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL                     
REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY                      
REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR                        
REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE                                    
REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN                            
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE                   
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16)       
REMARK 500                                                                      
REMARK 500  M RES CSSEQI    IMPROPER   EXPECTED   FOUND DETAILS                 
REMARK 500  3 ASN A 814        21.3      L          L   OUTSIDE RANGE           
REMARK 500 11 ARG A 745        22.6      L          L   OUTSIDE RANGE           
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  2KLQ A  708   821  UNP    Q14566   MCM6_HUMAN     708    821             
SEQADV 2KLQ SER A  721  UNP  Q14566    CYS   721 ENGINEERED MUTATION            
SEQRES   1 A  114  ALA PRO LYS ALA SER LEU ARG LEU GLY PHE SER GLU TYR          
SEQRES   2 A  114  SER ARG ILE SER ASN LEU ILE VAL LEU HIS LEU ARG LYS          
SEQRES   3 A  114  VAL GLU GLU GLU GLU ASP GLU SER ALA LEU LYS ARG SER          
SEQRES   4 A  114  GLU LEU VAL ASN TRP TYR LEU LYS GLU ILE GLU SER GLU          
SEQRES   5 A  114  ILE ASP SER GLU GLU GLU LEU ILE ASN LYS LYS ARG ILE          
SEQRES   6 A  114  ILE GLU LYS VAL ILE HIS ARG LEU THR HIS TYR ASP HIS          
SEQRES   7 A  114  VAL LEU ILE GLU LEU THR GLN ALA GLY LEU LYS GLY SER          
SEQRES   8 A  114  THR GLU GLY SER GLU SER TYR GLU GLU ASP PRO TYR LEU          
SEQRES   9 A  114  VAL VAL ASN PRO ASN TYR LEU LEU GLU ASP                      
HELIX    1   1 PHE A  717  GLU A  738  1                                  22    
HELIX    2   2 LYS A  744  GLU A  757  1                                  14    
HELIX    3   3 SER A  762  TYR A  783  1                                  22    
HELIX    4   4 GLN A  792  GLY A  797  1                                   6    
SHEET    1   A 2 LEU A 787  ILE A 788  0                                        
SHEET    2   A 2 VAL A 812  VAL A 813 -1  O  VAL A 812   N  ILE A 788           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000