PDB Short entry for 2KRB
HEADER    TRANSLATION                             16-DEC-09   2KRB              
TITLE     SOLUTION STRUCTURE OF EIF3B-RRM BOUND TO EIF3J PEPTIDE                
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B;      
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: RRM DOMAIN, UNP RESIDUES 184-264;                          
COMPND   5 SYNONYM: EIF3B, EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 9,
COMPND   6 EIF-3-ETA, EIF3 P116, EIF3 P110, PRT1 HOMOLOG, HPRT1;                
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MOL_ID: 2;                                                           
COMPND   9 MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT J;      
COMPND  10 CHAIN: B;                                                            
COMPND  11 FRAGMENT: UNP RESIDUES 45-55;                                        
COMPND  12 SYNONYM: EIF3J, EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 1,
COMPND  13 EIF-3-ALPHA, EIF3 P35;                                               
COMPND  14 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: EIF3B, EIF3S9;                                                 
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR;                               
SOURCE   9 EXPRESSION_SYSTEM_VECTOR: PET28A;                                    
SOURCE  10 MOL_ID: 2;                                                           
SOURCE  11 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE  12 ORGANISM_COMMON: HUMAN;                                              
SOURCE  13 ORGANISM_TAXID: 9606;                                                
SOURCE  14 GENE: EIF3J, EIF3S1, PRO0391;                                        
SOURCE  15 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  16 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE  17 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR;                               
SOURCE  18 EXPRESSION_SYSTEM_VECTOR: PET28A                                     
KEYWDS    EIF3, TRANSLATION INITIATION, EUKARYOTIC INITIATION FACTOR, EIF3B,    
KEYWDS   2 EIF3J, TRANSLATION                                                   
EXPDTA    SOLUTION NMR                                                          
NUMMDL    10                                                                    
AUTHOR    L.ELANTAK,S.WAGNER,A.HERRMANNOVA,M.JANOSKOVA,E.RUTKAI,P.J.LUKAVSKY,   
AUTHOR   2 L.VALASEK                                                            
REVDAT   2   16-MAR-22 2KRB    1       REMARK                                   
REVDAT   1   05-JAN-10 2KRB    0                                                
JRNL        AUTH   L.ELANTAK,S.WAGNER,A.HERRMANNOVA,M.JANOSKOVA,E.RUTKAI,       
JRNL        AUTH 2 P.J.LUKAVSKY,L.VALASEK                                       
JRNL        TITL   THE INDISPENSABLE N-TERMINAL HALF OF EIF3J/HCR1 CO-OPERATES  
JRNL        TITL 2 WITH ITS STRUCTURALLY CONSERVED BINDING PARTNER              
JRNL        TITL 3 EIF3B/PRT1-RRM AND EIF1A IN STRINGENT AUG SELECTION          
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CYANA, CYANA                                         
REMARK   3   AUTHORS     : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA),           
REMARK   3                 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA)            
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2KRB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-DEC-09.                  
REMARK 100 THE DEPOSITION ID IS D_1000101476.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 7.5                                
REMARK 210  IONIC STRENGTH                 : 0.1                                
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.7 MM [U-100% 13C; U-100% 15N]    
REMARK 210                                   EIF3B-RRM, 0.85 MM EIF3J PEPTIDE,  
REMARK 210                                   90% H2O/10% D2O; 0.7 MM EIF3B-     
REMARK 210                                   RRM, 0.85 MM [U-100% 13C; U-100%   
REMARK 210                                   15N] EIF3J PEPTIDE, 90% H2O/10%    
REMARK 210                                   D2O; 0.7 MM [U-100% 13C; U-100%    
REMARK 210                                   15N] EIF3B-RRM, 0.85 MM EIF3J      
REMARK 210                                   PEPTIDE, 100% D2O                  
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D 1H-15N NOESY; 3D 1H-13C         
REMARK 210                                   NOESY; 2D FILTERED/EDITED NOESY    
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ; 800 MHZ                   
REMARK 210  SPECTROMETER MODEL             : AMX; AVANCE                        
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NULL                               
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 10                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LEAST          
REMARK 210                                   RESTRAINT VIOLATIONS               
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500  9 ARG A  30   NE  -  CZ  -  NH1 ANGL. DEV. =   3.3 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ARG A  30      -29.38   -148.25                                   
REMARK 500  1 ASP A  82       88.52    -53.59                                   
REMARK 500  1 LYS A  85       59.64    -98.88                                   
REMARK 500  1 LYS A  88      -76.26   -128.25                                   
REMARK 500  1 GLN A  89      -69.86   -146.14                                   
REMARK 500  1 ASP B  47       73.51    -68.55                                   
REMARK 500  1 ASP B  50       57.34    -68.31                                   
REMARK 500  1 ASN B  51       47.91    -73.29                                   
REMARK 500  1 TRP B  52       27.74   -154.62                                   
REMARK 500  1 ASP B  53       94.52   -168.36                                   
REMARK 500  2 ARG A  30      -29.64   -150.61                                   
REMARK 500  2 ASP A  82       74.50    -61.80                                   
REMARK 500  2 ASP A  87      -66.49   -145.72                                   
REMARK 500  2 LYS A  88      -56.79   -159.27                                   
REMARK 500  2 ASN B  51        6.86    -61.33                                   
REMARK 500  3 ARG A  30      -29.57   -148.31                                   
REMARK 500  3 ASP A  51      116.74   -170.05                                   
REMARK 500  3 ASP A  82       83.21    -56.87                                   
REMARK 500  3 LYS A  85       49.12    -93.26                                   
REMARK 500  3 ASP A  87       91.84     67.56                                   
REMARK 500  3 LYS A  88      -78.37   -149.28                                   
REMARK 500  3 GLN A  89      -69.14   -142.16                                   
REMARK 500  3 ASP B  47      -63.05   -103.58                                   
REMARK 500  3 LYS B  49      159.25    -49.74                                   
REMARK 500  3 ASN B  51       10.77    -64.24                                   
REMARK 500  3 TRP B  52      -50.89   -122.67                                   
REMARK 500  4 ARG A  30      -29.61   -150.66                                   
REMARK 500  4 LYS A  61     -179.11    -62.91                                   
REMARK 500  4 ASP A  82       79.74    -56.54                                   
REMARK 500  4 LYS A  85       51.57    -93.58                                   
REMARK 500  4 LEU A  86       22.26    -72.52                                   
REMARK 500  4 ASP A  87      -88.91     56.37                                   
REMARK 500  4 LYS A  88     -142.90     45.20                                   
REMARK 500  4 ASP B  47       74.72    -64.76                                   
REMARK 500  4 VAL B  48      -49.98   -165.54                                   
REMARK 500  4 LYS B  49     -176.48   -172.95                                   
REMARK 500  4 ASP B  50       42.61    -98.03                                   
REMARK 500  4 ASN B  51       -6.71    -55.30                                   
REMARK 500  4 ASP B  54       33.06   -140.59                                   
REMARK 500  5 ARG A  30      -27.38   -150.36                                   
REMARK 500  5 LYS A  61      174.12    -59.23                                   
REMARK 500  5 ASP A  82       85.61    -57.21                                   
REMARK 500  5 ASP A  87       75.36     60.52                                   
REMARK 500  5 LYS A  88      -64.94   -142.30                                   
REMARK 500  5 GLN A  89      -74.38   -151.68                                   
REMARK 500  5 GLU B  46       53.21    -67.75                                   
REMARK 500  5 LYS B  49     -161.07     61.26                                   
REMARK 500  5 ASN B  51       12.19    -61.05                                   
REMARK 500  6 ARG A  30      -26.55   -151.52                                   
REMARK 500  6 ASP A  82       86.44    -52.33                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      88 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  1 TYR A  84         0.08    SIDE CHAIN                              
REMARK 500  4 TYR A  84         0.09    SIDE CHAIN                              
REMARK 500  5 TYR A  84         0.09    SIDE CHAIN                              
REMARK 500  6 TYR A  84         0.07    SIDE CHAIN                              
REMARK 500  7 TYR A  84         0.07    SIDE CHAIN                              
REMARK 500 10 TYR A  84         0.10    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  2KRB A   15    95  UNP    P55884   EIF3B_HUMAN    184    264             
DBREF  2KRB B   45    55  UNP    O75822   EIF3J_HUMAN     45     55             
SEQRES   1 A   81  ASP SER VAL ILE VAL VAL ASP ASN VAL PRO GLN VAL GLY          
SEQRES   2 A   81  PRO ASP ARG LEU GLU LYS LEU LYS ASN VAL ILE HIS LYS          
SEQRES   3 A   81  ILE PHE SER LYS PHE GLY LYS ILE THR ASN ASP PHE TYR          
SEQRES   4 A   81  PRO GLU GLU ASP GLY LYS THR LYS GLY TYR ILE PHE LEU          
SEQRES   5 A   81  GLU TYR ALA SER PRO ALA HIS ALA VAL ASP ALA VAL LYS          
SEQRES   6 A   81  ASN ALA ASP GLY TYR LYS LEU ASP LYS GLN HIS THR PHE          
SEQRES   7 A   81  ARG VAL ASN                                                  
SEQRES   1 B   11  ASP GLU ASP VAL LYS ASP ASN TRP ASP ASP ASP                  
HELIX    1   1 ARG A   30  LYS A   44  1                                  15    
HELIX    2   2 SER A   70  LYS A   79  1                                  10    
SHEET    1   A 3 VAL A  17  ASP A  21  0                                        
SHEET    2   A 3 TYR A  63  TYR A  68 -1  O  LEU A  66   N  ILE A  18           
SHEET    3   A 3 ILE A  48  PHE A  52 -1  N  PHE A  52   O  PHE A  65           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000