PDB Short entry for 2KY5
HEADER    CELL ADHESION                           14-MAY-10   2KY5              
TITLE     SOLUTION STRUCTURE OF THE PECAM-1 CYTOPLASMIC TAIL WITH DPC           
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PLATELET ENDOTHELIAL CELL ADHESION MOLECULE;               
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: SEQUENCE DATABASE RESIDUES 685-737;                        
COMPND   5 SYNONYM: PECAM-1, ENDOCAM, GPIIA', PECA1;                            
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: PECAM-1, PECAM1;                                               
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 511693;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21[PREP4];                               
SOURCE   9 EXPRESSION_SYSTEM_VECTOR: PQE30T                                     
KEYWDS    PECAM-1, ITIM, SIGNAL TRANSDUCTION, MEMBRANE ASSOCIATION, STRUCTURAL  
KEYWDS   2 GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, CENTER FOR EUKARYOTIC   
KEYWDS   3 STRUCTURAL GENOMICS, CELL ADHESION, CESG                             
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    B.L.LYTLE,F.C.PETERSON,B.F.VOLKMAN,C.PADDOCK,D.K.NEWMAN,CENTER FOR    
AUTHOR   2 EUKARYOTIC STRUCTURAL GENOMICS (CESG)                                
REVDAT   5   14-JUN-23 2KY5    1       REMARK                                   
REVDAT   4   05-FEB-20 2KY5    1       REMARK SEQADV                            
REVDAT   3   22-JUN-11 2KY5    1       JRNL                                     
REVDAT   2   27-APR-11 2KY5    1       JRNL                                     
REVDAT   1   26-MAY-10 2KY5    0                                                
JRNL        AUTH   C.PADDOCK,B.L.LYTLE,F.C.PETERSON,T.HOLYST,P.J.NEWMAN,        
JRNL        AUTH 2 B.F.VOLKMAN,D.K.NEWMAN                                       
JRNL        TITL   RESIDUES WITHIN A LIPID-ASSOCIATED SEGMENT OF THE PECAM-1    
JRNL        TITL 2 CYTOPLASMIC DOMAIN ARE SUSCEPTIBLE TO INDUCIBLE, SEQUENTIAL  
JRNL        TITL 3 PHOSPHORYLATION.                                             
JRNL        REF    BLOOD                         V. 117  6012 2011              
JRNL        REFN                   ISSN 0006-4971                               
JRNL        PMID   21464369                                                     
JRNL        DOI    10.1182/BLOOD-2010-11-317867                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : XPLOR-NIH 2.9.3                                      
REMARK   3   AUTHORS     :                                                      
REMARK   3  SCHWIETERS,C.D.,KUSZEWSKI,J.J.,TJANDRA,N.,CLORE,G.M.                
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: STRUCTURES ARE BASED ON A TOTAL OF 164    
REMARK   3  NOE CONSTRAINTS ( 81 INTRA, 42 SEQUENTIAL, 41 MEDIUM AND 0 LONG     
REMARK   3  RANGE CONSTRAINTS) AND 33 PHI AND PSI DIHEDRAL ANGLE                
REMARK   3  CONSTRAINTS.FINAL STRUCTURES WERE OBTAINED BY MOLECULAR DYNAMICS    
REMARK   3  IN EXPLICIT SOLVENT.                                                
REMARK   4                                                                      
REMARK   4 2KY5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAY-10.                  
REMARK 100 THE DEPOSITION ID IS D_1000101719.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 7.0                                
REMARK 210  IONIC STRENGTH                 : 52                                 
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1 MM [U-100% 13C; U-100% 15N]      
REMARK 210                                   PECAM-1, 20 MM SODIUM PHOSPHATE,   
REMARK 210                                   50 MM SODIUM CHLORIDE, 2 MM DTT,   
REMARK 210                                   600 MM [U-100% 2H] DPC, 95% H2O,   
REMARK 210                                   5% D2O                             
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_15N-SEPARATED_NOESY; 3D_13C     
REMARK 210                                   -SEPARATED_NOESY; 3D_13C-          
REMARK 210                                   SEPARATED_NOESY (AROMATIC)         
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE III                         
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : TOPSPIN 2.1, NMRPIPE 2009, XEASY   
REMARK 210                                   1.3, GARANT 2.1, CYANA 2.1         
REMARK 210   METHOD USED                   : MOLECULAR DYNAMICS                 
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : TARGET FUNCTION                    
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: AUTOMATED METHODS WERE USED FOR BACKBONE CHEMICAL SHIFT      
REMARK 210  ASSIGNMENT AND ITERATIVE NOE REFINEMENT.                            
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-20                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     GLY A   657                                                      
REMARK 465     SER A   658                                                      
REMARK 465     SER A   659                                                      
REMARK 465     ASP A   660                                                      
REMARK 465     VAL A   661                                                      
REMARK 465     GLN A   662                                                      
REMARK 465     TYR A   663                                                      
REMARK 465     THR A   664                                                      
REMARK 465     GLU A   665                                                      
REMARK 465     VAL A   666                                                      
REMARK 465     GLN A   667                                                      
REMARK 465     VAL A   668                                                      
REMARK 465     SER A   669                                                      
REMARK 465     SER A   670                                                      
REMARK 465     ALA A   671                                                      
REMARK 465     GLU A   672                                                      
REMARK 465     SER A   673                                                      
REMARK 465     HIS A   674                                                      
REMARK 465     LYS A   675                                                      
REMARK 465     ASP A   676                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 LYS A 679       80.96     64.18                                   
REMARK 500  1 SER A 707     -174.23     65.11                                   
REMARK 500  1 LEU A 708      -70.47   -121.51                                   
REMARK 500  1 ASP A 709       95.61   -179.27                                   
REMARK 500  2 LYS A 679       88.96     61.23                                   
REMARK 500  2 LYS A 680      -77.34     62.15                                   
REMARK 500  2 ASP A 681      128.00    173.89                                   
REMARK 500  2 GLU A 705       97.26     67.24                                   
REMARK 500  2 SER A 707      145.08   -172.64                                   
REMARK 500  3 LEU A 708      175.96     68.52                                   
REMARK 500  3 ASP A 709       93.59     62.60                                   
REMARK 500  4 LYS A 680       77.34     63.91                                   
REMARK 500  4 ASP A 681     -156.81   -105.38                                   
REMARK 500  4 TYR A 701       99.25    -62.26                                   
REMARK 500  4 ASP A 709     -176.66     68.68                                   
REMARK 500  5 LYS A 679     -176.40     65.02                                   
REMARK 500  5 ASP A 681      -51.55   -159.48                                   
REMARK 500  5 TYR A 701       83.34    -66.01                                   
REMARK 500  5 SER A 702      -65.87    176.19                                   
REMARK 500  6 LYS A 680      -54.31   -168.69                                   
REMARK 500  7 LYS A 680       95.22     62.42                                   
REMARK 500  7 TYR A 701       94.88    -68.24                                   
REMARK 500  7 GLU A 705      -74.15    -83.41                                   
REMARK 500  8 LYS A 680      -67.48   -164.68                                   
REMARK 500  8 ASP A 681      -81.99   -158.69                                   
REMARK 500  8 TYR A 701       90.63    -66.95                                   
REMARK 500  8 SER A 702      105.68     66.20                                   
REMARK 500  8 THR A 704      -84.56    -84.65                                   
REMARK 500  9 LYS A 680       77.02   -176.61                                   
REMARK 500  9 ASP A 681     -165.78   -109.32                                   
REMARK 500  9 THR A 704      177.59     60.31                                   
REMARK 500  9 GLU A 705      167.30     70.18                                   
REMARK 500 10 LYS A 680      -68.39   -109.94                                   
REMARK 500 10 ASP A 681       94.76     50.39                                   
REMARK 500 10 ARG A 703      109.37     63.92                                   
REMARK 500 10 GLU A 705       99.43    -58.30                                   
REMARK 500 10 ASP A 709      110.65   -162.55                                   
REMARK 500 11 ARG A 703      109.14     69.42                                   
REMARK 500 11 SER A 707      101.76     65.04                                   
REMARK 500 12 ARG A 703      -84.22   -105.74                                   
REMARK 500 12 THR A 704       85.92   -152.73                                   
REMARK 500 13 GLU A 705       83.95     63.82                                   
REMARK 500 13 ASP A 709      104.07     66.68                                   
REMARK 500 14 ASP A 681     -152.41    -94.11                                   
REMARK 500 14 LEU A 708       82.33     62.71                                   
REMARK 500 15 TYR A 701      103.12    -58.93                                   
REMARK 500 15 ARG A 703       82.76     66.86                                   
REMARK 500 15 ASP A 709       87.30     59.89                                   
REMARK 500 16 LYS A 679      -61.22   -108.71                                   
REMARK 500 16 ASP A 681      -77.84     33.17                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      60 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 16935   RELATED DB: BMRB                                 
DBREF  2KY5 A  659   711  UNP    P16284   PECA1_HUMAN    686    738             
SEQADV 2KY5 GLY A  657  UNP  P16284              EXPRESSION TAG                 
SEQADV 2KY5 SER A  658  UNP  P16284              EXPRESSION TAG                 
SEQRES   1 A   55  GLY SER SER ASP VAL GLN TYR THR GLU VAL GLN VAL SER          
SEQRES   2 A   55  SER ALA GLU SER HIS LYS ASP LEU GLY LYS LYS ASP THR          
SEQRES   3 A   55  GLU THR VAL TYR SER GLU VAL ARG LYS ALA VAL PRO ASP          
SEQRES   4 A   55  ALA VAL GLU SER ARG TYR SER ARG THR GLU GLY SER LEU          
SEQRES   5 A   55  ASP GLY THR                                                  
HELIX    1   1 ASP A  681  SER A  702  1                                  22    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000