PDB Short entry for 2KZS
HEADER    APOPTOSIS                               23-JUN-10   2KZS              
TITLE     DAXX HELICAL BUNDLE (DHB) DOMAIN                                      
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DEATH-ASSOCIATED PROTEIN 6;                                
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 55 TO 144;                                    
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: DAXX, DADB-159G18.9-007, DAMC-227D19.15-007, DAQB-126H3.2-007, 
SOURCE   6 XXBAC-BCX165D10.3-007, XXBAC-BPG185D15.6-007;                        
SOURCE   7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   9 EXPRESSION_SYSTEM_STRAIN: BL21;                                      
SOURCE  10 EXPRESSION_SYSTEM_VECTOR: PET28A;                                    
SOURCE  11 OTHER_DETAILS: CLONED INTO PET28A FROM A HUMAN CDNA LIBRARY, USING   
SOURCE  12 NDEI AND XHOI                                                        
KEYWDS    HELICAL BUNDLE, DHB DOMAIN, FAS DEATH-DOMAIN ASSOCIATED PROTEIN,      
KEYWDS   2 DAXX, RASSF1C INTERACTING DOMAIN, APOPTOSIS                          
EXPDTA    SOLUTION NMR                                                          
NUMMDL    25                                                                    
AUTHOR    E.ESCOBAR-CABRERA,D.K.W.LAU,S.GIOVINAZZI,A.M.ISHOV,L.P.MCINTOSH       
REVDAT   3   14-JUN-23 2KZS    1       REMARK                                   
REVDAT   2   05-FEB-20 2KZS    1       SEQADV                                   
REVDAT   1   15-DEC-10 2KZS    0                                                
JRNL        AUTH   E.ESCOBAR-CABRERA,D.K.LAU,S.GIOVINAZZI,A.M.ISHOV,            
JRNL        AUTH 2 L.P.MCINTOSH                                                 
JRNL        TITL   STRUCTURAL CHARACTERIZATION OF THE DAXX N-TERMINAL HELICAL   
JRNL        TITL 2 BUNDLE DOMAIN AND ITS COMPLEX WITH RASSF1C.                  
JRNL        REF    STRUCTURE                     V.  18  1642 2010              
JRNL        REFN                   ISSN 0969-2126                               
JRNL        PMID   21134643                                                     
JRNL        DOI    10.1016/J.STR.2010.09.016                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : ARIA 2.2, ARIA 2.2                                   
REMARK   3   AUTHORS     : LINGE, O'DONOGHUE AND NILGES (ARIA), LINGE,          
REMARK   3                 O'DONOGHUE AND NILGES (ARIA)                         
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2KZS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUN-10.                  
REMARK 100 THE DEPOSITION ID IS D_1000101777.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 6.5                                
REMARK 210  IONIC STRENGTH                 : 0.16                               
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1.2 MM [U-100% 13C; U-100% 15N]    
REMARK 210                                   DAXX-1, 10 MM POTASSIUM            
REMARK 210                                   PHOSPHATE-2, 100 MM KCL-3, 0.1     
REMARK 210                                   MM EDTA-4, 95% H2O/5% D2O; 0.8     
REMARK 210                                   MM [U-10% 13C] DAXX-5, 95% H2O/5%  
REMARK 210                                   D2O                                
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 3D HNCACB; 2D 1H   
REMARK 210                                   -13C HSQC; 3D CBCA(CO)NH; 3D       
REMARK 210                                   HBHA(CO)NH; 3D HCCH-TOCSY; 3D 1H-  
REMARK 210                                   15N NOESY; 3D 1H-15N TOCSY; 3D     
REMARK 210                                   1H-13C NOESY; 3D H(CC)(CO)NH-      
REMARK 210                                   TOCSY; 2D (HB)CB(CGCD)HD; 2D (HB)  
REMARK 210                                   CBCGCDCE)HE; 2D HMBC; CT METHYL-   
REMARK 210                                   METHYL-HSQC; CT AMIDE-METHYL-HSQC  
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ; 500 MHZ                   
REMARK 210  SPECTROMETER MODEL             : INOVA; UNITY                       
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : ARIA 2.2                           
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 120                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 25                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   HG2  LYS A   141     H    LYS A   142              1.24            
REMARK 500   O    LEU A   123     H    ILE A   127              1.58            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500 10 TYR A  59   CE1   TYR A  59   CZ     -0.109                       
REMARK 500 10 TYR A  59   CZ    TYR A  59   CE2     0.105                       
REMARK 500 17 TYR A  59   CE1   TYR A  59   CZ     -0.143                       
REMARK 500 17 TYR A  59   CZ    TYR A  59   CE2     0.136                       
REMARK 500 23 TYR A  59   CE1   TYR A  59   CZ     -0.096                       
REMARK 500 23 TYR A  59   CZ    TYR A  59   CE2     0.087                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 THR A  78       46.21   -105.50                                   
REMARK 500  1 LYS A 142      -36.70   -158.31                                   
REMARK 500  1 LEU A 143      -35.71    164.23                                   
REMARK 500  2 SER A  52       74.70   -115.31                                   
REMARK 500  2 LYS A  56      -85.58    -84.25                                   
REMARK 500  2 THR A  78       47.26   -109.54                                   
REMARK 500  2 LYS A 141      174.85    -54.09                                   
REMARK 500  3 LYS A  57      -50.74    109.64                                   
REMARK 500  3 CYS A  58      108.58     48.10                                   
REMARK 500  3 THR A  78       48.79   -105.39                                   
REMARK 500  3 LYS A 140       78.99   -109.76                                   
REMARK 500  3 LEU A 143      -86.66     68.09                                   
REMARK 500  4 SER A  52      160.72     71.08                                   
REMARK 500  4 MET A  54       31.29   -145.58                                   
REMARK 500  4 LYS A  57      131.92    -36.27                                   
REMARK 500  4 THR A  78       46.87   -107.09                                   
REMARK 500  5 HIS A  53      -53.63   -148.72                                   
REMARK 500  5 LYS A  56      -84.36     85.27                                   
REMARK 500  5 LYS A  57     -148.44    -94.85                                   
REMARK 500  5 CYS A  58       68.38   -160.82                                   
REMARK 500  5 THR A  78       44.05    -99.13                                   
REMARK 500  5 LYS A 141       31.34   -163.52                                   
REMARK 500  5 LYS A 142       49.16    -79.04                                   
REMARK 500  6 LYS A  56      -84.41     80.98                                   
REMARK 500  6 LYS A  57      -74.62   -168.13                                   
REMARK 500  6 CYS A  58      108.12     62.39                                   
REMARK 500  7 MET A  54      -65.34     70.22                                   
REMARK 500  7 LYS A  56      -96.43    -78.57                                   
REMARK 500  7 THR A  78       48.94   -104.09                                   
REMARK 500  7 LYS A 142       42.40   -169.54                                   
REMARK 500  7 LEU A 143      -48.80     67.91                                   
REMARK 500  8 HIS A  53     -147.40     43.26                                   
REMARK 500  8 MET A  54     -143.23    -85.29                                   
REMARK 500  8 LYS A  57      175.99     49.27                                   
REMARK 500  8 CYS A  58       84.97     50.05                                   
REMARK 500  8 LYS A 141       92.45    176.17                                   
REMARK 500  8 LEU A 143      -40.00     79.93                                   
REMARK 500  9 MET A  54      -67.14    -98.78                                   
REMARK 500  9 LYS A  57      116.30    -35.01                                   
REMARK 500  9 THR A  78       45.93   -105.64                                   
REMARK 500  9 LYS A 140       70.76   -113.13                                   
REMARK 500  9 LEU A 143       35.04   -161.06                                   
REMARK 500 10 SER A  52      -62.94     69.05                                   
REMARK 500 10 LYS A  57      -65.61    160.32                                   
REMARK 500 10 CYS A  58       84.26     54.85                                   
REMARK 500 10 LYS A 142       66.20     70.29                                   
REMARK 500 10 LEU A 143       36.32    -75.33                                   
REMARK 500 11 SER A  52       75.32     62.65                                   
REMARK 500 11 HIS A  53      -53.03   -156.89                                   
REMARK 500 11 MET A  54      -74.59     66.61                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     128 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 17018   RELATED DB: BMRB                                 
DBREF  2KZS A   55   144  UNP    Q4VX54   Q4VX54_HUMAN    55    144             
SEQADV 2KZS GLY A   51  UNP  Q4VX54              EXPRESSION TAG                 
SEQADV 2KZS SER A   52  UNP  Q4VX54              EXPRESSION TAG                 
SEQADV 2KZS HIS A   53  UNP  Q4VX54              EXPRESSION TAG                 
SEQADV 2KZS MET A   54  UNP  Q4VX54              EXPRESSION TAG                 
SEQRES   1 A   94  GLY SER HIS MET GLY LYS LYS CYS TYR LYS LEU GLU ASN          
SEQRES   2 A   94  GLU LYS LEU PHE GLU GLU PHE LEU GLU LEU CYS LYS MET          
SEQRES   3 A   94  GLN THR ALA ASP HIS PRO GLU VAL VAL PRO PHE LEU TYR          
SEQRES   4 A   94  ASN ARG GLN GLN ARG ALA HIS SER LEU PHE LEU ALA SER          
SEQRES   5 A   94  ALA GLU PHE CYS ASN ILE LEU SER ARG VAL LEU SER ARG          
SEQRES   6 A   94  ALA ARG SER ARG PRO ALA LYS LEU TYR VAL TYR ILE ASN          
SEQRES   7 A   94  GLU LEU CYS THR VAL LEU LYS ALA HIS SER ALA LYS LYS          
SEQRES   8 A   94  LYS LEU ASN                                                  
HELIX    1   1 TYR A   59  THR A   78  1                                  20    
HELIX    2   2 GLU A   83  ARG A   94  1                                  12    
HELIX    3   3 HIS A   96  ALA A  101  1                                   6    
HELIX    4   4 SER A  102  ARG A  119  1                                  18    
HELIX    5   5 LYS A  122  HIS A  137  1                                  16    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000