PDB Short entry for 2L9U
HEADER    MEMBRANE PROTEIN                        24-FEB-11   2L9U              
TITLE     SPATIAL STRUCTURE OF DIMERIC ERBB3 TRANSMEMBRANE DOMAIN               
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-3;                   
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 FRAGMENT: UNP RESIDUES 640-670;                                      
COMPND   5 SYNONYM: PROTO-ONCOGENE-LIKE PROTEIN C-ERBB-3, TYROSINE KINASE-TYPE  
COMPND   6 CELL SURFACE RECEPTOR HER3;                                          
COMPND   7 EC: 2.7.10.1;                                                        
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: ERBB3, HER3;                                                   
SOURCE   6 EXPRESSION_SYSTEM: CELL-FREE SYNTHESIS;                              
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR;                               
SOURCE   8 EXPRESSION_SYSTEM_VECTOR: PET-22B                                    
KEYWDS    TRANSMENBRANE DIMER, MEMBRANE PROTEIN, ERBB, EGFR                     
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    K.S.MINEEV,A.S.ARSENIEV                                               
REVDAT   3   14-JUN-23 2L9U    1       REMARK SEQADV                            
REVDAT   2   06-SEP-17 2L9U    1       JRNL                                     
REVDAT   1   18-MAY-11 2L9U    0                                                
JRNL        AUTH   K.S.MINEEV,N.F.KHABIBULLINA,E.N.LYUKMANOVA,D.A.DOLGIKH,      
JRNL        AUTH 2 M.P.KIRPICHNIKOV,A.S.ARSENIEV                                
JRNL        TITL   SPATIAL STRUCTURE AND DIMER--MONOMER EQUILIBRIUM OF THE      
JRNL        TITL 2 ERBB3 TRANSMEMBRANE DOMAIN IN DPC MICELLES.                  
JRNL        REF    BIOCHIM. BIOPHYS. ACTA        V.1808  2081 2011              
JRNL        REFN                   ISSN 0006-3002                               
JRNL        PMID   21575594                                                     
JRNL        DOI    10.1016/J.BBAMEM.2011.04.017                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CYANA 3.0                                            
REMARK   3   AUTHORS     : GUNTERT, MUMENTHALER AND WUTHRICH                    
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2L9U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-MAR-11.                  
REMARK 100 THE DEPOSITION ID IS D_1000102137.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 313                                
REMARK 210  PH                             : 5.5                                
REMARK 210  IONIC STRENGTH                 : 50                                 
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1 MM [U-100% 13C; U-100% 15N]      
REMARK 210                                   ERBB3TM-1, 1 MM ERBB3TM-2, 80 MM   
REMARK 210                                   [U-99% 2H] DPC-3, 1 MM SODIUM      
REMARK 210                                   AZIDE-4, 90% H2O/10% D2O; 1 MM     
REMARK 210                                   [U-100% 13C; U-100% 15N] ERBB3TM-  
REMARK 210                                   5, 1 MM ERBB3TM-6, 80 MM [U-99%    
REMARK 210                                   2H] DPC-7, 1 MM SODIUM AZIDE-8,    
REMARK 210                                   100% D2O                           
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D HNCO; 3D HNCA; 3D HN(CO)CA;     
REMARK 210                                   3D 1H-15N NOESY; 3D 1H-13C NOESY;  
REMARK 210                                   2D 1H-15N HSQC; 2D 1H-13C HSQC     
REMARK 210                                   ALIPHATIC; 2D 1H-13C HSQC          
REMARK 210                                   AROMATIC; 3D 15N,13C-FILTERED,     
REMARK 210                                   13C-EDITED NOESY                   
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ; 600 MHZ                   
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : CARA 1.8.5, TOPSPIN 2.1            
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 200                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : TARGET FUNCTION                    
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 THR B 640      -50.93   -129.06                                   
REMARK 500  1 ARG B 670       65.83   -112.16                                   
REMARK 500  2 THR B 640      -50.92   -130.35                                   
REMARK 500  2 HIS B 673      -74.66    -52.08                                   
REMARK 500  2 HIS B 674     -169.76     51.99                                   
REMARK 500  2 HIS B 675       89.93     54.24                                   
REMARK 500  3 THR B 640      -50.91   -129.49                                   
REMARK 500  3 ARG B 669      -70.53    -55.48                                   
REMARK 500  3 ARG B 670       68.67   -117.94                                   
REMARK 500  3 HIS B 673      -64.29   -149.04                                   
REMARK 500  3 HIS B 675      -70.02     71.40                                   
REMARK 500  4 THR B 640      -58.97   -135.52                                   
REMARK 500  5 ARG B 639       91.90     54.71                                   
REMARK 500  5 THR B 640      -50.12   -132.44                                   
REMARK 500  5 HIS B 672     -175.36    -63.04                                   
REMARK 500  5 HIS B 674       82.01     57.21                                   
REMARK 500  6 ARG B 639       91.99     54.75                                   
REMARK 500  6 THR B 640      -50.30   -141.27                                   
REMARK 500  6 HIS B 671      -68.92     71.14                                   
REMARK 500  6 HIS B 675       82.59     52.53                                   
REMARK 500  7 HIS B 674       38.68   -142.95                                   
REMARK 500  8 ARG A 669      -70.71    -55.28                                   
REMARK 500  8 ARG A 670       69.33   -119.87                                   
REMARK 500  8 THR B 640      -50.95   -126.76                                   
REMARK 500  8 ARG B 670       35.57    -94.96                                   
REMARK 500  8 HIS B 675      -68.38   -120.73                                   
REMARK 500  9 THR B 640      -51.11   -128.04                                   
REMARK 500  9 HIS B 671      -68.78     71.24                                   
REMARK 500  9 HIS B 672       91.95     56.80                                   
REMARK 500 10 ARG B 639       91.94     54.72                                   
REMARK 500 10 THR B 640      -50.17   -138.60                                   
REMARK 500 10 HIS B 672       79.16   -103.95                                   
REMARK 500 10 HIS B 674      -74.09   -142.22                                   
REMARK 500 11 ARG B 639       91.86     54.79                                   
REMARK 500 11 THR B 640      -50.50   -131.27                                   
REMARK 500 11 ARG B 670       69.37   -118.67                                   
REMARK 500 11 HIS B 672       32.30   -147.67                                   
REMARK 500 11 HIS B 673      -71.71   -135.85                                   
REMARK 500 12 ARG B 639       89.67     53.03                                   
REMARK 500 12 ARG B 670       69.24   -118.95                                   
REMARK 500 12 HIS B 672       82.74   -159.11                                   
REMARK 500 12 HIS B 674       64.88   -163.37                                   
REMARK 500 13 HIS A 673      104.37    -52.20                                   
REMARK 500 13 ARG B 639       91.57     54.29                                   
REMARK 500 13 THR B 640      -49.08   -140.44                                   
REMARK 500 13 HIS B 674       83.81   -150.22                                   
REMARK 500 14 THR B 640      -51.12   -132.00                                   
REMARK 500 14 HIS B 673      -58.88   -122.58                                   
REMARK 500 14 HIS B 674      170.76     62.15                                   
REMARK 500 15 ARG B 639       91.86     54.82                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      72 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 17488   RELATED DB: BMRB                                 
DBREF  2L9U A  639   670  UNP    P21860   ERBB3_HUMAN    639    670             
DBREF  2L9U B  639   670  UNP    P21860   ERBB3_HUMAN    639    670             
SEQADV 2L9U MET A  637  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U GLY A  638  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U ARG A  639  UNP  P21860    LYS   639 ENGINEERED MUTATION            
SEQADV 2L9U HIS A  671  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U HIS A  672  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U HIS A  673  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U HIS A  674  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U HIS A  675  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U HIS A  676  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U MET B  637  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U GLY B  638  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U ARG B  639  UNP  P21860    LYS   639 ENGINEERED MUTATION            
SEQADV 2L9U HIS B  671  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U HIS B  672  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U HIS B  673  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U HIS B  674  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U HIS B  675  UNP  P21860              EXPRESSION TAG                 
SEQADV 2L9U HIS B  676  UNP  P21860              EXPRESSION TAG                 
SEQRES   1 A   40  MET GLY ARG THR HIS LEU THR MET ALA LEU THR VAL ILE          
SEQRES   2 A   40  ALA GLY LEU VAL VAL ILE PHE MET MET LEU GLY GLY THR          
SEQRES   3 A   40  PHE LEU TYR TRP ARG GLY ARG ARG HIS HIS HIS HIS HIS          
SEQRES   4 A   40  HIS                                                          
SEQRES   1 B   40  MET GLY ARG THR HIS LEU THR MET ALA LEU THR VAL ILE          
SEQRES   2 B   40  ALA GLY LEU VAL VAL ILE PHE MET MET LEU GLY GLY THR          
SEQRES   3 B   40  PHE LEU TYR TRP ARG GLY ARG ARG HIS HIS HIS HIS HIS          
SEQRES   4 B   40  HIS                                                          
HELIX    1   1 THR A  640  HIS A  672  1                                  33    
HELIX    2   2 THR B  640  ARG B  670  1                                  31    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000