PDB Short entry for 2LK4 HEADER TRANSFERASE 04-OCT-11 2LK4 TITLE STRUCTURAL AND MECHANISTIC INSIGHTS INTO THE INTERACTION BETWEEN PAT TITLE 2 PYK2 AND PAXILLIN LD MOTIF COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN-TYROSINE KINASE 2-BETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FOCAL ADHESION TARGETING (FAT) REGION RESIDUES 871-1005; COMPND 5 SYNONYM: CALCIUM-DEPENDENT TYROSINE KINASE, CADTK, CELL ADHESION COMPND 6 KINASE BETA, CAK-BETA, FOCAL ADHESION KINASE 2, FADK 2, PROLINE-RICH COMPND 7 TYROSINE KINASE 2, RELATED ADHESION FOCAL TYROSINE KINASE, RAFTK; COMPND 8 EC: 2.7.10.2; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTK2B, FAK2, PYK2, RAFTK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28 KEYWDS TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 MDLTYP MINIMIZED AVERAGE AUTHOR M.VANAROTTI,D.MILLER,C.GUIBAO,J.ZHENG REVDAT 3 31-DEC-14 2LK4 1 JRNL REVDAT 2 24-SEP-14 2LK4 1 JRNL REVDAT 1 10-OCT-12 2LK4 0 JRNL AUTH M.S.VANAROTTI,D.J.MILLER,C.D.GUIBAO,A.NOURSE,J.J.ZHENG JRNL TITL STRUCTURAL AND MECHANISTIC INSIGHTS INTO THE INTERACTION JRNL TITL 2 BETWEEN PYK2 AND PAXILLIN LD MOTIFS. JRNL REF J.MOL.BIOL. V. 426 3985 2014 JRNL REFN ISSN 0022-2836 JRNL PMID 25174335 JRNL DOI 10.1016/J.JMB.2014.08.014 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LK4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-OCT-11. REMARK 100 THE RCSB ID CODE IS RCSB102479. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 305 REMARK 210 PH : 6.2 REMARK 210 IONIC STRENGTH : 7 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5-1 MM [U-100% 13C; U-100% REMARK 210 15N] MES, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HCCH-TOCSY; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY ALIPHATIC; 3D HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 3 58.50 -100.24 REMARK 500 1 SER A 29 42.64 -97.42 REMARK 500 1 GLN A 30 -72.76 -137.54 REMARK 500 1 PRO A 62 -165.53 -69.77 REMARK 500 1 SER A 63 53.18 -107.77 REMARK 500 1 SER A 64 -42.74 -144.94 REMARK 500 1 VAL A 95 75.04 -105.42 REMARK 500 2 ASP A 4 44.19 -99.81 REMARK 500 2 ASP A 7 40.62 -99.36 REMARK 500 2 GLN A 30 11.25 -140.98 REMARK 500 2 ALA A 94 109.27 -51.56 REMARK 500 2 ALA A 134 73.97 62.35 REMARK 500 3 ASN A 2 58.42 -102.55 REMARK 500 3 LEU A 3 64.35 -111.52 REMARK 500 3 ASP A 7 34.69 -97.86 REMARK 500 3 ASP A 8 101.53 -53.73 REMARK 500 3 SER A 29 42.52 -98.89 REMARK 500 3 GLN A 30 -74.02 -138.72 REMARK 500 4 GLN A 30 -40.01 -130.34 REMARK 500 4 SER A 64 -49.55 -168.51 REMARK 500 4 ASN A 93 84.88 -69.92 REMARK 500 5 ASP A 7 31.74 -96.64 REMARK 500 5 SER A 29 42.49 -99.37 REMARK 500 5 GLN A 30 -74.15 -153.22 REMARK 500 5 SER A 64 -53.36 -168.69 REMARK 500 5 VAL A 95 70.64 52.27 REMARK 500 6 LEU A 9 14.99 -144.12 REMARK 500 7 ASN A 2 77.93 -103.38 REMARK 500 7 ASP A 4 102.97 -57.89 REMARK 500 7 THR A 6 -75.68 -51.92 REMARK 500 7 PRO A 62 -175.40 -69.75 REMARK 500 7 SER A 64 -70.05 -174.85 REMARK 500 7 SER A 97 48.68 -90.94 REMARK 500 8 LYS A 25 -71.17 -69.33 REMARK 500 8 GLN A 91 36.89 -99.80 REMARK 500 8 VAL A 95 76.52 63.92 REMARK 500 9 SER A 29 46.03 -106.01 REMARK 500 9 GLN A 30 -48.35 -134.10 REMARK 500 9 SER A 64 -38.55 -170.29 REMARK 500 9 GLN A 91 31.46 -95.74 REMARK 500 9 VAL A 95 65.80 -104.39 REMARK 500 9 LEU A 98 -75.87 -121.40 REMARK 500 10 ASP A 7 33.89 -95.54 REMARK 500 10 SER A 29 43.45 -93.10 REMARK 500 10 GLN A 30 -40.63 -134.36 REMARK 500 10 PRO A 62 -174.99 -69.77 REMARK 500 10 SER A 63 53.93 -94.24 REMARK 500 10 SER A 64 -46.58 -149.94 REMARK 500 10 VAL A 95 58.37 -141.81 REMARK 500 11 ASN A 2 61.64 -113.36 REMARK 500 REMARK 500 THIS ENTRY HAS 104 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17974 RELATED DB: BMRB DBREF 2LK4 A 1 135 UNP Q14289 FAK2_HUMAN 871 1005 SEQADV 2LK4 SER A 29 UNP Q14289 CYS 899 CONFLICT SEQADV 2LK4 ALA A 102 UNP Q14289 CYS 972 CONFLICT SEQRES 1 A 135 ALA ASN LEU ASP ARG THR ASP ASP LEU VAL TYR LEU ASN SEQRES 2 A 135 VAL MET GLU LEU VAL ARG ALA VAL LEU GLU LEU LYS ASN SEQRES 3 A 135 GLU LEU SER GLN LEU PRO PRO GLU GLY TYR VAL VAL VAL SEQRES 4 A 135 VAL LYS ASN VAL GLY LEU THR LEU ARG LYS LEU ILE GLY SEQRES 5 A 135 SER VAL ASP ASP LEU LEU PRO SER LEU PRO SER SER SER SEQRES 6 A 135 ARG THR GLU ILE GLU GLY THR GLN LYS LEU LEU ASN LYS SEQRES 7 A 135 ASP LEU ALA GLU LEU ILE ASN LYS MET ARG LEU ALA GLN SEQRES 8 A 135 GLN ASN ALA VAL THR SER LEU SER GLU GLU ALA LYS ARG SEQRES 9 A 135 GLN MET LEU THR ALA SER HIS THR LEU ALA VAL ASP ALA SEQRES 10 A 135 LYS ASN LEU LEU ASP ALA VAL ASP GLN ALA LYS VAL LEU SEQRES 11 A 135 ALA ASN LEU ALA HIS HELIX 1 1 LEU A 9 LEU A 24 1 16 HELIX 2 2 LYS A 25 GLN A 30 5 6 HELIX 3 3 PRO A 32 LEU A 45 1 14 HELIX 4 4 THR A 46 ASP A 55 1 10 HELIX 5 5 LEU A 57 LEU A 61 5 5 HELIX 6 6 SER A 65 LEU A 76 1 12 HELIX 7 7 LEU A 80 GLN A 91 1 12 HELIX 8 8 SER A 97 ALA A 134 1 38 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000