PDB Short entry for 2LLL HEADER STRUCTURAL PROTEIN 11-NOV-11 2LLL TITLE SOLUTION NMR STRUCTURE OF C-TERMINAL GLOBULAR DOMAIN OF HUMAN LAMIN- TITLE 2 B2, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET HR8546A COMPND MOL_ID: 1; COMPND 2 MOLECULE: LAMIN-B2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 449-569; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LMNB2, LMN2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28B KEYWDS IMMUNOGLOBULIN-LIKE FOLD, STRUCTURAL PROTEIN, NESG, NORTHEAST KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC, STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 CHAPERONE-ENABLED STUDIES OF EPIGENETIC REGULATION ENZYMES, CEBS, KEYWDS 4 PSI-BIOLOGY EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.LEMAK,A.YEE,S.HOULISTON,M.GARCIA,C.XU,J.MIN,G.T.MONTELIONE, AUTHOR 2 C.ARROWSMITH,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (SGC),CHAPERONE-ENABLED STUDIES OF AUTHOR 4 EPIGENETIC REGULATION ENZYMES (CEBS) REVDAT 3 14-JUN-23 2LLL 1 REMARK SEQADV REVDAT 2 14-DEC-11 2LLL 1 AUTHOR KEYWDS REVDAT 1 07-DEC-11 2LLL 0 JRNL AUTH A.LEMAK,A.YEE,S.HOULISTON,M.GARCIA,C.XU,J.MIN, JRNL AUTH 2 G.T.MONTELIONE,C.ARROWSMITH JRNL TITL NMR SOLUTION STRUCTURE OF C-TERMINAL GLOBULAR DOMAIN OF JRNL TITL 2 HUMAN LAMIN-B2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CNS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LLL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000102531. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 450 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] PROTEIN, REMARK 210 10 MM SODIUM PHOSPHATE, 450 MM REMARK 210 SODIUM CHLORIDE, 10 UM ZNSO4, 10 REMARK 210 MM DTT, 0.01 % NAN3, 1 MM REMARK 210 BENZAMIDINE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HNCA; 3D CBCA(CO)NH; REMARK 210 3D HBHA(CO)NH; 3D HCCH-TOCSY; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, FMC, TALOS, PSVS, CYANA REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MONOMERIC, BASED ON N15 RELAXATION DATA REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 HIS A 436 REMARK 465 HIS A 437 REMARK 465 SER A 438 REMARK 465 SER A 439 REMARK 465 GLY A 440 REMARK 465 ARG A 441 REMARK 465 GLU A 442 REMARK 465 ASN A 443 REMARK 465 LEU A 444 REMARK 465 TYR A 445 REMARK 465 PHE A 446 REMARK 465 GLN A 447 REMARK 465 GLY A 448 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 457 -68.05 -93.97 REMARK 500 1 TRP A 528 91.06 -67.53 REMARK 500 1 MET A 554 139.22 -170.52 REMARK 500 1 SER A 561 90.70 61.15 REMARK 500 2 GLN A 507 -162.46 -115.19 REMARK 500 2 MET A 554 116.20 -164.21 REMARK 500 2 VAL A 562 -43.68 -137.68 REMARK 500 2 ARG A 564 111.36 69.90 REMARK 500 3 SER A 453 -62.72 -176.98 REMARK 500 3 SER A 561 105.76 61.74 REMARK 500 3 GLU A 565 104.10 66.05 REMARK 500 3 ASN A 566 56.08 -113.66 REMARK 500 4 SER A 453 -57.68 -167.89 REMARK 500 4 TRP A 528 95.17 -69.21 REMARK 500 4 ASN A 546 -168.15 -117.12 REMARK 500 4 ASN A 568 21.88 -147.94 REMARK 500 5 ALA A 450 90.97 -69.57 REMARK 500 5 GLU A 457 -66.28 -94.83 REMARK 500 5 ASP A 475 104.49 -53.39 REMARK 500 5 SER A 477 98.36 -68.84 REMARK 500 5 LYS A 559 97.15 -56.76 REMARK 500 5 SER A 561 99.95 -65.20 REMARK 500 5 ARG A 564 -162.19 -118.37 REMARK 500 5 ASN A 566 78.17 -171.31 REMARK 500 6 SER A 453 -0.72 70.76 REMARK 500 6 GLN A 507 -164.05 -105.52 REMARK 500 6 SER A 524 -68.30 -90.42 REMARK 500 7 ALA A 450 89.26 -152.02 REMARK 500 7 SER A 453 -42.55 177.26 REMARK 500 7 SER A 477 98.01 -66.20 REMARK 500 7 GLU A 492 79.84 -115.53 REMARK 500 7 LYS A 559 98.96 -59.80 REMARK 500 7 ARG A 564 128.76 67.73 REMARK 500 7 ASN A 568 85.10 59.48 REMARK 500 8 ASP A 475 108.70 -59.11 REMARK 500 8 SER A 561 -174.66 70.22 REMARK 500 9 GLN A 507 -166.53 -107.69 REMARK 500 9 PRO A 523 30.70 -99.90 REMARK 500 9 MET A 554 115.97 -169.57 REMARK 500 9 GLU A 565 110.28 -160.44 REMARK 500 9 GLU A 567 -44.86 -162.77 REMARK 500 10 GLU A 457 -76.11 -87.68 REMARK 500 10 ARG A 555 108.51 -160.86 REMARK 500 10 LYS A 559 105.77 -54.02 REMARK 500 10 SER A 560 -41.64 -160.65 REMARK 500 10 ASN A 568 83.86 59.51 REMARK 500 11 GLU A 457 -71.38 -70.33 REMARK 500 11 SER A 521 79.35 -152.41 REMARK 500 11 ASN A 566 -29.39 74.34 REMARK 500 11 ASN A 568 -75.39 74.01 REMARK 500 REMARK 500 THIS ENTRY HAS 91 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18053 RELATED DB: BMRB REMARK 900 RELATED ID: HR8546A RELATED DB: TARGETDB DBREF 2LLL A 449 569 UNP Q03252 LMNB2_HUMAN 449 569 SEQADV 2LLL MET A 431 UNP Q03252 EXPRESSION TAG SEQADV 2LLL HIS A 432 UNP Q03252 EXPRESSION TAG SEQADV 2LLL HIS A 433 UNP Q03252 EXPRESSION TAG SEQADV 2LLL HIS A 434 UNP Q03252 EXPRESSION TAG SEQADV 2LLL HIS A 435 UNP Q03252 EXPRESSION TAG SEQADV 2LLL HIS A 436 UNP Q03252 EXPRESSION TAG SEQADV 2LLL HIS A 437 UNP Q03252 EXPRESSION TAG SEQADV 2LLL SER A 438 UNP Q03252 EXPRESSION TAG SEQADV 2LLL SER A 439 UNP Q03252 EXPRESSION TAG SEQADV 2LLL GLY A 440 UNP Q03252 EXPRESSION TAG SEQADV 2LLL ARG A 441 UNP Q03252 EXPRESSION TAG SEQADV 2LLL GLU A 442 UNP Q03252 EXPRESSION TAG SEQADV 2LLL ASN A 443 UNP Q03252 EXPRESSION TAG SEQADV 2LLL LEU A 444 UNP Q03252 EXPRESSION TAG SEQADV 2LLL TYR A 445 UNP Q03252 EXPRESSION TAG SEQADV 2LLL PHE A 446 UNP Q03252 EXPRESSION TAG SEQADV 2LLL GLN A 447 UNP Q03252 EXPRESSION TAG SEQADV 2LLL GLY A 448 UNP Q03252 EXPRESSION TAG SEQRES 1 A 139 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 139 LEU TYR PHE GLN GLY SER ALA SER GLY SER VAL SER ILE SEQRES 3 A 139 GLU GLU ILE ASP LEU GLU GLY LYS PHE VAL GLN LEU LYS SEQRES 4 A 139 ASN ASN SER ASP LYS ASP GLN SER LEU GLY ASN TRP ARG SEQRES 5 A 139 ILE LYS ARG GLN VAL LEU GLU GLY GLU GLU ILE ALA TYR SEQRES 6 A 139 LYS PHE THR PRO LYS TYR ILE LEU ARG ALA GLY GLN MET SEQRES 7 A 139 VAL THR VAL TRP ALA ALA GLY ALA GLY VAL ALA HIS SER SEQRES 8 A 139 PRO PRO SER THR LEU VAL TRP LYS GLY GLN SER SER TRP SEQRES 9 A 139 GLY THR GLY GLU SER PHE ARG THR VAL LEU VAL ASN ALA SEQRES 10 A 139 ASP GLY GLU GLU VAL ALA MET ARG THR VAL LYS LYS SER SEQRES 11 A 139 SER VAL MET ARG GLU ASN GLU ASN GLY HELIX 1 1 GLY A 515 GLY A 517 5 3 SHEET 1 A 4 VAL A 454 ILE A 459 0 SHEET 2 A 4 PHE A 465 ASN A 470 -1 O LYS A 469 N SER A 455 SHEET 3 A 4 MET A 508 ALA A 513 -1 O VAL A 509 N LEU A 468 SHEET 4 A 4 THR A 525 TRP A 528 1 O TRP A 528 N TRP A 512 SHEET 1 B 2 GLN A 476 SER A 477 0 SHEET 2 B 2 ILE A 502 LEU A 503 -1 O LEU A 503 N GLN A 476 SHEET 1 C 4 GLU A 492 LYS A 496 0 SHEET 2 C 4 ARG A 482 VAL A 487 -1 N ILE A 483 O TYR A 495 SHEET 3 C 4 SER A 539 VAL A 545 -1 O VAL A 543 N LYS A 484 SHEET 4 C 4 GLU A 551 LYS A 558 -1 O ALA A 553 N LEU A 544 CISPEP 1 PRO A 522 PRO A 523 1 -2.71 CISPEP 2 PRO A 522 PRO A 523 2 4.63 CISPEP 3 PRO A 522 PRO A 523 3 -1.15 CISPEP 4 PRO A 522 PRO A 523 4 4.15 CISPEP 5 PRO A 522 PRO A 523 5 -0.75 CISPEP 6 PRO A 522 PRO A 523 6 0.98 CISPEP 7 PRO A 522 PRO A 523 7 -2.23 CISPEP 8 PRO A 522 PRO A 523 8 6.05 CISPEP 9 PRO A 522 PRO A 523 9 -0.44 CISPEP 10 PRO A 522 PRO A 523 10 2.52 CISPEP 11 PRO A 522 PRO A 523 11 1.66 CISPEP 12 PRO A 522 PRO A 523 12 -1.92 CISPEP 13 PRO A 522 PRO A 523 13 3.82 CISPEP 14 PRO A 522 PRO A 523 14 3.87 CISPEP 15 PRO A 522 PRO A 523 15 1.40 CISPEP 16 PRO A 522 PRO A 523 16 3.93 CISPEP 17 PRO A 522 PRO A 523 17 -0.14 CISPEP 18 PRO A 522 PRO A 523 18 0.71 CISPEP 19 PRO A 522 PRO A 523 19 -2.62 CISPEP 20 PRO A 522 PRO A 523 20 -1.61 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000