PDB Short entry for 2LNA
HEADER    HYDROLASE                               20-DEC-11   2LNA              
TITLE     SOLUTION NMR STRUCTURE OF THE MITOCHONDRIAL INNER MEMBRANE DOMAIN     
TITLE    2 (RESIDUES 164-251), FTSH_EXT, FROM THE PARAPLEGIN-LIKE PROTEIN AFG3L2
TITLE    3 FROM HOMO SAPIENS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET   
TITLE    4 HR6741A                                                              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: AFG3-LIKE PROTEIN 2;                                       
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 164-251;                                      
COMPND   5 SYNONYM: PARAPLEGIN-LIKE PROTEIN;                                    
COMPND   6 EC: 3.4.24.-;                                                        
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: AFG3L2;                                                        
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PMGK;                             
SOURCE   9 EXPRESSION_SYSTEM_VECTOR: PET15_NESG                                 
KEYWDS    STRUCTURAL GENOMICS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), 
KEYWDS   2 PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, MPP, HYDROLASE            
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    T.A.RAMELOT,Y.YANG,H.LEE,H.JANUA,E.KOHAN,R.SHASTRY,T.B.ACTON,R.XIAO,  
AUTHOR   2 J.K.EVERETT,J.H.PRESTEGARD,G.T.MONTELIONE,M.A.KENNEDY,NORTHEAST      
AUTHOR   3 STRUCTURAL GENOMICS CONSORTIUM (NESG),MITOCHONDRIAL PROTEIN          
AUTHOR   4 PARTNERSHIP (MPP)                                                    
REVDAT   3   30-OCT-13 2LNA    1       JRNL                                     
REVDAT   2   21-MAR-12 2LNA    1       TITLE                                    
REVDAT   1   25-JAN-12 2LNA    0                                                
JRNL        AUTH   T.A.RAMELOT,Y.YANG,I.D.SAHU,H.W.LEE,R.XIAO,G.A.LORIGAN,      
JRNL        AUTH 2 G.T.MONTELIONE,M.A.KENNEDY                                   
JRNL        TITL   NMR STRUCTURE AND MD SIMULATIONS OF THE AAA PROTEASE         
JRNL        TITL 2 INTERMEMBRANE SPACE DOMAIN INDICATES PERIPHERAL MEMBRANE     
JRNL        TITL 3 LOCALIZATION WITHIN THE HEXAOLIGOMER.                        
JRNL        REF    FEBS LETT.                    V. 587  3522 2013              
JRNL        REFN                   ISSN 0014-5793                               
JRNL        PMID   24055473                                                     
JRNL        DOI    10.1016/J.FEBSLET.2013.09.009                                
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.3, CYANA 3.0, AUTOSTRUCTURE 2.1                
REMARK   3   AUTHORS     : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ (CNS)   
REMARK   3                 , GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), HUANG,  
REMARK   3                 TEJERO, POWERS AND MONTELIONE (AUTOSTRUCTURE)        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: CNS REFINEMENT IN EXPLICIT WATER + TWO    
REMARK   3  SETS OF NH RDCS                                                     
REMARK   4                                                                      
REMARK   4 2LNA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-DEC-11.                  
REMARK 100 THE RCSB ID CODE IS RCSB102592.                                      
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 6.5                                
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.7 MM [U-100% 13C; U-100% 15N]    
REMARK 210                                   HR6741A, 200 MM SODIUM CHLORIDE,   
REMARK 210                                   20 MM MES, 5 MM CALCIUM CHLORIDE,  
REMARK 210                                   10 MM DTT, 10 UM DSS, 0.02 %       
REMARK 210                                   SODIUM AZIDE, 90% H2O/10% D2O;     
REMARK 210                                   1.0 MM NC5 HR6741A, 200 MM SODIUM  
REMARK 210                                   CHLORIDE, 20 MM MES, 5 MM CALCIUM  
REMARK 210                                   CHLORIDE, 10 MM DTT, 10 UM DSS,    
REMARK 210                                   0.02 % SODIUM AZIDE, 90% H2O/10%   
REMARK 210                                   D2O; 0.7 MM [U-100% 13C; U-100%    
REMARK 210                                   15N] HR6741A, 200 MM SODIUM        
REMARK 210                                   CHLORIDE, 20 MM MES, 5 MM CALCIUM  
REMARK 210                                   CHLORIDE, 10 MM DTT, 10 UM DSS,    
REMARK 210                                   0.02 % SODIUM AZIDE, 100% D2O      
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 2D 1H-13C HSQC;    
REMARK 210                                   3D HNCO; 3D CBCA(CO)NH; 3D         
REMARK 210                                   HNCACB; 3D 1H-13C AROM NOESY; 3D   
REMARK 210                                   1H-13C NOESYALIPH; 3D 1H-15N       
REMARK 210                                   NOESY; 2D 1H-13C HSQC ALIPHATIC;   
REMARK 210                                   2D 1H-15N HETNOE; 3D HN(CO)CA; 3D  
REMARK 210                                   HCCH-TOCSY; 3D HCCH-COSY; 3D       
REMARK 210                                   H(CCO)NH; 3D C(CO)NH; 3D HBHA(CO)  
REMARK 210                                   NH; 4D CC-HMQC-NOESY-HMQC; 3D CCH  
REMARK 210                                   -TOCSY                             
REMARK 210  SPECTROMETER FIELD STRENGTH    : 850 MHZ; 600 MHZ                   
REMARK 210  SPECTROMETER MODEL             : AVANCEIII; INOVA                   
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER; VARIAN                     
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : CNS 1.3, CYANA 3.0,                
REMARK 210                                   AUTOSTRUCTURE 2.1, NMRPIPE 2008    
REMARK 210                                   LINUX9, TOPSPIN 2.1.4 AND 3.1,     
REMARK 210                                   VNMRJ, PINE, SPARKY 3.113, TALOS+  
REMARK 210                                   1.2009.0721.18, PALES 2000, PSVS   
REMARK 210                                   1.4, X-PLOR_NIH 2.25               
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST ENERGY  
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 HIS A   6       96.22    -66.34                                   
REMARK 500  1 MET A  11       98.80    -62.03                                   
REMARK 500  1 LYS A  12       73.39    -60.43                                   
REMARK 500  1 ARG A  13      -74.70     58.49                                   
REMARK 500  1 SER A  14      -51.04   -163.52                                   
REMARK 500  1 TYR A  27      -64.72   -127.81                                   
REMARK 500  1 LYS A  41        5.43     55.85                                   
REMARK 500  1 PRO A  50       97.16    -50.30                                   
REMARK 500  1 GLN A  58       94.15     66.99                                   
REMARK 500  1 ALA A  95       90.86   -161.04                                   
REMARK 500  2 HIS A   4     -168.42    -75.34                                   
REMARK 500  2 HIS A   5       89.15    -66.71                                   
REMARK 500  2 HIS A   8      102.57    -54.46                                   
REMARK 500  2 HIS A  10       74.43   -153.05                                   
REMARK 500  2 MET A  11      -89.95     56.67                                   
REMARK 500  2 ARG A  13      -64.03   -170.58                                   
REMARK 500  2 SER A  14      -70.14     64.31                                   
REMARK 500  2 TYR A  27      -64.84   -122.13                                   
REMARK 500  2 LYS A  41       17.15     53.70                                   
REMARK 500  3 MET A  11      -19.95     70.18                                   
REMARK 500  3 LYS A  12       74.12     52.03                                   
REMARK 500  3 ARG A  13       31.33    -85.53                                   
REMARK 500  3 SER A  14       93.66    -55.11                                   
REMARK 500  3 ASN A  40       18.61     58.66                                   
REMARK 500  3 ASP A  98      -71.10     66.87                                   
REMARK 500  4 HIS A   3      -93.12     50.99                                   
REMARK 500  4 HIS A   4      103.77   -171.73                                   
REMARK 500  4 HIS A   6      142.81     69.03                                   
REMARK 500  4 ASN A  40       18.45     54.12                                   
REMARK 500  4 LYS A  41       16.04     57.09                                   
REMARK 500  4 GLN A  58       85.33     56.44                                   
REMARK 500  5 HIS A   3       87.51    -62.21                                   
REMARK 500  5 HIS A   6     -178.20     65.29                                   
REMARK 500  5 HIS A   7       -0.71     71.28                                   
REMARK 500  5 SER A  14      -22.08     79.98                                   
REMARK 500  5 TYR A  27      -69.35   -122.75                                   
REMARK 500  5 LYS A  41       -4.44     63.31                                   
REMARK 500  5 PRO A  50      104.50    -54.99                                   
REMARK 500  5 GLU A  96      -78.89     64.31                                   
REMARK 500  6 HIS A   3       15.45   -146.91                                   
REMARK 500  6 HIS A   6       91.88    -68.63                                   
REMARK 500  6 SER A   9      -86.93     41.08                                   
REMARK 500  6 LYS A  12      -70.29     72.73                                   
REMARK 500  6 TYR A  27      -69.95   -126.12                                   
REMARK 500  6 LYS A  41       -3.02     65.64                                   
REMARK 500  6 PRO A  54      153.14    -49.98                                   
REMARK 500  6 GLU A  96       99.22    -67.85                                   
REMARK 500  6 SER A  97       46.15   -146.18                                   
REMARK 500  7 HIS A   8      -30.24   -164.86                                   
REMARK 500  7 HIS A  10       46.59   -142.99                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     155 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 18156   RELATED DB: BMRB                                 
REMARK 900 RELATED ID: HR6741A   RELATED DB: TARGETDB                           
DBREF  2LNA A   12    99  UNP    Q9Y4W6   AFG32_HUMAN    164    251             
SEQADV 2LNA MET A    1  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQADV 2LNA GLY A    2  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQADV 2LNA HIS A    3  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQADV 2LNA HIS A    4  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQADV 2LNA HIS A    5  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQADV 2LNA HIS A    6  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQADV 2LNA HIS A    7  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQADV 2LNA HIS A    8  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQADV 2LNA SER A    9  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQADV 2LNA HIS A   10  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQADV 2LNA MET A   11  UNP  Q9Y4W6              EXPRESSION TAG                 
SEQRES   1 A   99  MET GLY HIS HIS HIS HIS HIS HIS SER HIS MET LYS ARG          
SEQRES   2 A   99  SER GLY ARG GLU ILE THR TRP LYS ASP PHE VAL ASN ASN          
SEQRES   3 A   99  TYR LEU SER LYS GLY VAL VAL ASP ARG LEU GLU VAL VAL          
SEQRES   4 A   99  ASN LYS ARG PHE VAL ARG VAL THR PHE THR PRO GLY LYS          
SEQRES   5 A   99  THR PRO VAL ASP GLY GLN TYR VAL TRP PHE ASN ILE GLY          
SEQRES   6 A   99  SER VAL ASP THR PHE GLU ARG ASN LEU GLU THR LEU GLN          
SEQRES   7 A   99  GLN GLU LEU GLY ILE GLU GLY GLU ASN ARG VAL PRO VAL          
SEQRES   8 A   99  VAL TYR ILE ALA GLU SER ASP GLY                              
HELIX    1   1 THR A   19  TYR A   27  1                                   9    
HELIX    2   2 LEU A   28  GLY A   31  5                                   4    
HELIX    3   3 SER A   66  LEU A   81  1                                  16    
SHEET    1   A 5 ARG A  16  GLU A  17  0                                        
SHEET    2   A 5 VAL A  60  ASN A  63  1  O  TRP A  61   N  ARG A  16           
SHEET    3   A 5 PHE A  43  PHE A  48 -1  N  VAL A  44   O  PHE A  62           
SHEET    4   A 5 VAL A  33  VAL A  39 -1  N  GLU A  37   O  ARG A  45           
SHEET    5   A 5 VAL A  91  TYR A  93  1  O  VAL A  92   N  VAL A  38           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000