PDB Short entry for 2LQB HEADER HYDROLASE 28-FEB-12 2LQB TITLE METAL BINDING REPEAT 2 OF THE WILSON DISEASE PROTEIN (ATP7B) COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER-TRANSPORTING ATPASE 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HMA 2 DOMAIN RESIDUES 141-212; COMPND 5 SYNONYM: COPPER PUMP 2, WILSON DISEASE-ASSOCIATED PROTEIN, WND/140 COMPND 6 KDA; COMPND 7 EC: 3.6.3.4; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ATP7B, PWD, WC1, WND; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PTYB12 KEYWDS COPPER BINDING, HYDROLASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.NOKHRIN,N.V.DOLGOVA,C.YU,O.Y.DMITRIEV REVDAT 4 14-JUN-23 2LQB 1 REMARK SEQADV REVDAT 3 14-AUG-13 2LQB 1 JRNL REVDAT 2 24-JUL-13 2LQB 1 JRNL REVDAT 1 03-JUL-13 2LQB 0 JRNL AUTH N.V.DOLGOVA,S.NOKHRIN,C.H.YU,G.N.GEORGE,O.Y.DMITRIEV JRNL TITL COPPER CHAPERONE ATOX1 INTERACTS WITH THE METAL-BINDING JRNL TITL 2 DOMAIN OF WILSON'S DISEASE PROTEIN IN CISPLATIN JRNL TITL 3 DETOXIFICATION. JRNL REF BIOCHEM.J. V. 454 147 2013 JRNL REFN ISSN 0264-6021 JRNL PMID 23751120 JRNL DOI 10.1042/BJ20121656 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.0, CYANA 3.0 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LQB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000102699. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 50 MM [U-2H] TRIS-CL, 0.5 MM REMARK 210 DSS, 0.05 MM SODIUM AZIDE, 5 % REMARK 210 [U-2H] D2O, 5 MM TCEP (TRIS(2- REMARK 210 CARBOXYETHYL)PHOSPHINE), 95% H2O/ REMARK 210 5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HNCACB; 3D HN(COCA)CB; REMARK 210 3D C(CO)NH; 3D H(CCO)NH; 3D 1H- REMARK 210 15N TOCSY; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY; 3D HN(CA)CO REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AUTOASSIGN, CARA 1.9.0, FELIX REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 19 179.17 -57.03 REMARK 500 1 GLN A 33 -72.69 -86.31 REMARK 500 1 LEU A 55 -75.65 -111.62 REMARK 500 2 HIS A 3 106.32 -161.49 REMARK 500 2 CYS A 18 176.14 -54.36 REMARK 500 2 GLN A 33 -76.03 -85.02 REMARK 500 2 LEU A 55 -74.97 -108.78 REMARK 500 3 GLN A 33 -72.00 -83.96 REMARK 500 3 LEU A 55 -71.74 -108.94 REMARK 500 4 MET A 16 -167.69 -60.84 REMARK 500 4 GLN A 19 66.85 60.48 REMARK 500 4 SER A 20 -35.75 -178.68 REMARK 500 4 LEU A 55 -70.13 -109.51 REMARK 500 4 LYS A 75 -154.03 -89.29 REMARK 500 5 MET A 16 -176.31 -57.85 REMARK 500 5 SER A 20 47.82 -90.52 REMARK 500 5 LEU A 55 -70.91 -108.09 REMARK 500 5 ALA A 72 137.28 -39.90 REMARK 500 6 GLN A 33 -76.00 -84.85 REMARK 500 6 LEU A 55 -75.13 -109.73 REMARK 500 7 THR A 17 -73.91 -139.67 REMARK 500 7 GLN A 19 99.81 -69.34 REMARK 500 7 SER A 20 -37.09 179.06 REMARK 500 7 LEU A 55 -70.59 -113.13 REMARK 500 8 GLN A 19 172.05 -53.43 REMARK 500 8 SER A 20 61.34 -109.23 REMARK 500 8 GLN A 33 -71.29 -83.87 REMARK 500 8 LEU A 55 -73.10 -107.37 REMARK 500 9 THR A 17 -74.46 -138.46 REMARK 500 9 SER A 20 48.47 -89.74 REMARK 500 9 LEU A 55 -70.11 -112.64 REMARK 500 10 MET A 4 51.77 -110.97 REMARK 500 10 LEU A 55 -69.87 -108.56 REMARK 500 11 HIS A 3 -59.43 -120.76 REMARK 500 11 GLN A 19 103.38 -51.06 REMARK 500 11 SER A 20 -53.30 180.00 REMARK 500 11 LEU A 55 -70.98 -111.72 REMARK 500 12 LEU A 55 -74.50 -108.02 REMARK 500 13 LYS A 10 131.31 -26.89 REMARK 500 14 MET A 4 41.75 39.38 REMARK 500 14 LYS A 10 132.39 -27.14 REMARK 500 14 THR A 17 -49.92 -143.85 REMARK 500 14 CYS A 18 -169.42 -108.80 REMARK 500 14 SER A 20 -62.64 -146.93 REMARK 500 14 LEU A 55 -76.36 -111.15 REMARK 500 15 MET A 4 42.57 -97.28 REMARK 500 15 MET A 16 29.44 40.43 REMARK 500 15 THR A 17 167.51 -49.85 REMARK 500 15 LEU A 55 -70.92 -113.09 REMARK 500 16 CYS A 18 78.37 48.66 REMARK 500 REMARK 500 THIS ENTRY HAS 67 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18301 RELATED DB: BMRB DBREF 2LQB A 5 76 UNP P35670 ATP7B_HUMAN 141 212 SEQADV 2LQB ALA A 1 UNP P35670 EXPRESSION TAG SEQADV 2LQB GLY A 2 UNP P35670 EXPRESSION TAG SEQADV 2LQB HIS A 3 UNP P35670 EXPRESSION TAG SEQADV 2LQB MET A 4 UNP P35670 EXPRESSION TAG SEQRES 1 A 76 ALA GLY HIS MET GLN GLU ALA VAL VAL LYS LEU ARG VAL SEQRES 2 A 76 GLU GLY MET THR CYS GLN SER CYS VAL SER SER ILE GLU SEQRES 3 A 76 GLY LYS VAL ARG LYS LEU GLN GLY VAL VAL ARG VAL LYS SEQRES 4 A 76 VAL SER LEU SER ASN GLN GLU ALA VAL ILE THR TYR GLN SEQRES 5 A 76 PRO TYR LEU ILE GLN PRO GLU ASP LEU ARG ASP HIS VAL SEQRES 6 A 76 ASN ASP MET GLY PHE GLU ALA ALA ILE LYS SER HELIX 1 1 SER A 20 VAL A 29 1 10 HELIX 2 2 ARG A 30 LEU A 32 5 3 HELIX 3 3 GLN A 57 ASP A 67 1 11 SHEET 1 A 4 ARG A 37 SER A 41 0 SHEET 2 A 4 GLU A 46 TYR A 51 -1 O VAL A 48 N LYS A 39 SHEET 3 A 4 ALA A 7 VAL A 13 -1 N VAL A 9 O ILE A 49 SHEET 4 A 4 ALA A 72 ILE A 74 -1 O ALA A 73 N ARG A 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000