PDB Short entry for 2LS2 HEADER METAL TRANSPORT 20-APR-12 2LS2 TITLE 1H CHEMICAL SHIFT ASSIGNMENTS FOR THE FIRST TRANSMEMBRANE DOMAIN FROM TITLE 2 HUMAN COPPER TRANSPORT 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIGH AFFINITY COPPER UPTAKE PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: COPPER TRANSPORTER 1, HCTR1, SOLUTE CARRIER FAMILY 31 MEMBER COMPND 5 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SLC31A1, COPT1, CTR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HCTR1 TMDS, OLIGOMERIZATION, METAL TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.YANG,Z.HUANG,F.LI REVDAT 2 14-JUN-23 2LS2 1 REMARK SEQADV REVDAT 1 06-JUN-12 2LS2 0 JRNL AUTH L.YANG,Z.HUANG,F.LI JRNL TITL STRUCTURAL INSIGHTS INTO THE TRANSMEMBRANE DOMAINS OF HUMAN JRNL TITL 2 COPPER TRANSPORTER 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GLNTERT P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LS2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000102762. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2 MM TMD1-1, 40% REMARK 210 HEXAFLUOROISOPROPANOL (HFIP) REMARK 210 AQUEOUS SOLUTION REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 2D 1H-1H TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE TOCSY SPECTRA WERE RECORDED WITH MIXING TIME OF 100 REMARK 210 MS. THE NOESY SPECTRA WERE RECORDED WITH MIXING TIMES 200 MS. REMARK 210 THE WATERGATE TECHNIQUE WAS USED IN BOTH EXPERIMENTS FOR WATER REMARK 210 SUPPRESSION REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 4 H MET A 7 1.54 REMARK 500 O ALA A 13 H LEU A 17 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 3 82.93 -150.40 REMARK 500 1 MET A 7 -73.89 -99.36 REMARK 500 1 TYR A 21 -70.50 -50.71 REMARK 500 2 ASN A 2 155.95 75.93 REMARK 500 2 THR A 3 72.75 45.90 REMARK 500 2 MET A 7 -71.61 -100.96 REMARK 500 3 THR A 3 68.64 38.69 REMARK 500 3 MET A 7 -73.54 -99.47 REMARK 500 3 LEU A 24 -163.65 -57.18 REMARK 500 4 THR A 3 62.82 39.08 REMARK 500 4 MET A 7 -67.12 -104.62 REMARK 500 4 GLU A 22 -30.29 -38.45 REMARK 500 4 LEU A 24 -164.87 -61.09 REMARK 500 5 ASN A 2 156.30 -40.67 REMARK 500 5 MET A 7 -70.67 -99.26 REMARK 500 5 LEU A 24 -53.63 -140.17 REMARK 500 6 THR A 3 81.68 41.77 REMARK 500 6 MET A 7 -71.34 -96.93 REMARK 500 7 MET A 7 -73.64 -99.59 REMARK 500 8 ASN A 2 125.59 62.92 REMARK 500 8 THR A 3 60.33 -112.39 REMARK 500 8 MET A 7 -73.94 -94.56 REMARK 500 8 LEU A 24 -79.58 63.73 REMARK 500 9 THR A 3 61.60 -150.56 REMARK 500 9 MET A 7 -70.58 -101.98 REMARK 500 9 GLU A 22 -60.17 -101.94 REMARK 500 10 ASN A 2 92.49 60.81 REMARK 500 10 MET A 7 -73.94 -98.89 REMARK 500 11 ASN A 2 110.71 -171.73 REMARK 500 11 MET A 7 -70.72 -100.50 REMARK 500 12 MET A 7 -66.67 -104.69 REMARK 500 12 LEU A 24 173.46 -47.82 REMARK 500 13 MET A 7 -79.17 -97.47 REMARK 500 13 TYR A 21 -72.41 -51.74 REMARK 500 14 ASN A 2 128.69 178.93 REMARK 500 14 MET A 7 -78.87 -96.58 REMARK 500 14 GLU A 22 14.99 -142.14 REMARK 500 15 THR A 3 66.35 37.24 REMARK 500 15 MET A 7 -73.68 -101.45 REMARK 500 15 TYR A 21 -71.35 -54.27 REMARK 500 15 GLU A 22 14.81 -141.82 REMARK 500 16 MET A 7 -81.36 -94.31 REMARK 500 17 MET A 7 -80.68 -94.49 REMARK 500 17 LEU A 24 52.73 -91.81 REMARK 500 18 ASN A 2 91.22 43.90 REMARK 500 18 THR A 3 64.21 38.90 REMARK 500 18 MET A 7 -69.30 -102.79 REMARK 500 19 ASN A 2 105.52 176.87 REMARK 500 19 THR A 3 72.50 -108.70 REMARK 500 19 MET A 7 -80.76 -94.35 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18408 RELATED DB: BMRB REMARK 900 RELATED ID: 2LS3 RELATED DB: PDB REMARK 900 RELATED ID: 2LS4 RELATED DB: PDB DBREF 2LS2 A 2 25 UNP O15431 COPT1_HUMAN 64 87 SEQADV 2LS2 LYS A 1 UNP O15431 EXPRESSION TAG SEQRES 1 A 25 LYS ASN THR ALA GLY GLU MET ALA GLY ALA PHE VAL ALA SEQRES 2 A 25 VAL PHE LEU LEU ALA MET PHE TYR GLU GLY LEU LYS HELIX 1 1 ALA A 4 TYR A 21 1 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000