PDB Short entry for 2LT8 HEADER ANTIMICROBIAL PROTEIN 15-MAY-12 2LT8 TITLE EUROCIN SOLUTION STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EUROCIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EUROTIUM AMSTELODAMI; SOURCE 3 ORGANISM_TAXID: 5054; SOURCE 4 EXPRESSION_SYSTEM: ASPERGILLUS ORYZAE; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 5062 KEYWDS A/B-FOLD, CYSTEINE STABILISED, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.S.OEEMIG,C.LYNGGAARD,D.H.KNUDSEN,F.T.HANSEN,K.D.NOERGAARD, AUTHOR 2 T.SCHNEIDER,B.S.VAD,S.NEVE,H.KRISTENSEN,H.SAHL,D.E.OTZEN,R.WIMMER REVDAT 4 14-JUN-23 2LT8 1 REMARK REVDAT 3 26-DEC-12 2LT8 1 JRNL REVDAT 2 07-NOV-12 2LT8 1 JRNL REVDAT 1 31-OCT-12 2LT8 0 JRNL AUTH J.S.OEEMIG,C.LYNGGAARD,D.H.KNUDSEN,F.T.HANSEN,K.D.NORGAARD, JRNL AUTH 2 T.SCHNEIDER,B.S.VAD,D.H.SANDVANG,L.A.NIELSEN,S.NEVE, JRNL AUTH 3 H.H.KRISTENSEN,H.G.SAHL,D.E.OTZEN,R.WIMMER JRNL TITL EUROCIN, A NEW FUNGAL DEFENSIN: STRUCTURE, LIPID BINDING, JRNL TITL 2 AND ITS MODE OF ACTION. JRNL REF J.BIOL.CHEM. V. 287 42361 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 23093408 JRNL DOI 10.1074/JBC.M112.382028 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, YASARA 12.1.19 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), DR. REMARK 3 ELMAR KRIEGER (YASARA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LT8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000102804. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.1 REMARK 210 PH : 4.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.68 MM EUROCIN, 95 MM FORMIC REMARK 210 ACID, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 2D 1H-1H TOCSY; 2D DQF- REMARK 210 COSY; 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY 1.5.5, TOPSPIN 1.3, REMARK 210 PROCHECKNMR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 30 -176.06 -68.13 REMARK 500 1 TRP A 31 0.60 -65.37 REMARK 500 1 LEU A 33 -163.63 64.15 REMARK 500 2 PRO A 30 -177.52 -67.56 REMARK 500 2 TRP A 31 0.50 -66.46 REMARK 500 2 LEU A 33 -166.44 64.47 REMARK 500 3 PRO A 30 -176.18 -67.81 REMARK 500 3 LEU A 33 -170.74 64.68 REMARK 500 4 PRO A 30 -177.25 -68.56 REMARK 500 4 LEU A 33 -165.23 63.63 REMARK 500 5 PRO A 30 -178.37 -67.78 REMARK 500 5 TRP A 31 0.59 -66.39 REMARK 500 5 LEU A 33 -167.31 63.88 REMARK 500 6 PRO A 30 -179.49 -67.61 REMARK 500 6 LEU A 33 -162.47 63.83 REMARK 500 7 PRO A 30 -175.59 -68.65 REMARK 500 7 LEU A 33 -164.66 64.45 REMARK 500 8 PRO A 30 -176.48 -68.37 REMARK 500 8 TRP A 31 0.48 -65.46 REMARK 500 8 LEU A 33 -168.11 64.15 REMARK 500 9 PRO A 30 -179.02 -67.82 REMARK 500 9 LEU A 33 -172.94 66.30 REMARK 500 10 PRO A 30 -177.99 -67.66 REMARK 500 10 TRP A 31 0.62 -66.17 REMARK 500 10 LEU A 33 -164.37 62.99 REMARK 500 11 PRO A 30 -176.34 -68.39 REMARK 500 11 LEU A 33 -163.98 63.34 REMARK 500 12 TRP A 31 1.21 -67.96 REMARK 500 12 LEU A 33 -153.92 62.06 REMARK 500 13 PRO A 30 -179.21 -68.88 REMARK 500 13 LEU A 33 -159.90 64.62 REMARK 500 14 PRO A 30 -178.27 -68.52 REMARK 500 14 TRP A 31 0.32 -66.29 REMARK 500 14 LEU A 33 -167.95 64.78 REMARK 500 15 PRO A 30 -178.84 -69.68 REMARK 500 15 LEU A 33 -159.02 64.06 REMARK 500 16 PRO A 30 -177.97 -68.28 REMARK 500 16 LEU A 33 -160.79 62.37 REMARK 500 17 PRO A 30 -179.41 -68.97 REMARK 500 17 LEU A 33 -164.69 65.83 REMARK 500 18 PRO A 30 -179.26 -68.48 REMARK 500 18 LEU A 33 -151.63 63.54 REMARK 500 19 PRO A 30 -176.01 -67.51 REMARK 500 19 LEU A 33 -162.23 64.46 REMARK 500 20 TRP A 31 0.54 -69.22 REMARK 500 20 LEU A 33 -155.20 61.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18463 RELATED DB: BMRB DBREF 2LT8 A 1 42 PDB 2LT8 2LT8 1 42 SEQRES 1 A 42 GLY PHE GLY CYS PRO GLY ASP ALA TYR GLN CYS SER GLU SEQRES 2 A 42 HIS CYS ARG ALA LEU GLY GLY GLY ARG THR GLY GLY TYR SEQRES 3 A 42 CYS ALA GLY PRO TRP TYR LEU GLY HIS PRO THR CYS THR SEQRES 4 A 42 CYS SER PHE HELIX 1 1 ASP A 7 GLY A 19 1 13 SHEET 1 A 2 GLY A 24 ALA A 28 0 SHEET 2 A 2 THR A 37 SER A 41 -1 O THR A 39 N TYR A 26 SSBOND 1 CYS A 4 CYS A 27 1555 1555 2.02 SSBOND 2 CYS A 11 CYS A 38 1555 1555 2.03 SSBOND 3 CYS A 15 CYS A 40 1555 1555 2.04 CISPEP 1 CYS A 4 PRO A 5 1 -1.42 CISPEP 2 CYS A 4 PRO A 5 2 -0.96 CISPEP 3 CYS A 4 PRO A 5 3 0.51 CISPEP 4 CYS A 4 PRO A 5 4 -1.14 CISPEP 5 CYS A 4 PRO A 5 5 -1.44 CISPEP 6 CYS A 4 PRO A 5 6 0.23 CISPEP 7 CYS A 4 PRO A 5 7 -2.14 CISPEP 8 CYS A 4 PRO A 5 8 0.16 CISPEP 9 CYS A 4 PRO A 5 9 -0.76 CISPEP 10 CYS A 4 PRO A 5 10 -0.35 CISPEP 11 CYS A 4 PRO A 5 11 -1.54 CISPEP 12 CYS A 4 PRO A 5 12 -2.15 CISPEP 13 CYS A 4 PRO A 5 13 -2.10 CISPEP 14 CYS A 4 PRO A 5 14 -1.12 CISPEP 15 CYS A 4 PRO A 5 15 -1.57 CISPEP 16 CYS A 4 PRO A 5 16 -1.36 CISPEP 17 CYS A 4 PRO A 5 17 -0.82 CISPEP 18 CYS A 4 PRO A 5 18 0.54 CISPEP 19 CYS A 4 PRO A 5 19 -1.23 CISPEP 20 CYS A 4 PRO A 5 20 -2.17 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000