PDB Short entry for 2LTY
HEADER    PROTEIN BINDING/PEPTIDE                 04-JUN-12   2LTY              
TITLE     NEDD4L WW2 DOMAIN IN COMPLEX WITH A SMAD7 DERIVED PEPTIDE             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE NEDD4-LIKE;                    
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: WW2 DOMAIN (UNP RESIDUES 385-417);                         
COMPND   5 SYNONYM: NEDD4.2, NEDD4-2;                                           
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MOL_ID: 2;                                                           
COMPND   8 MOLECULE: SMAD7 DERIVED PEPTIDE;                                     
COMPND   9 CHAIN: B;                                                            
COMPND  10 FRAGMENT: UNP RESIDUES 203-217;                                      
COMPND  11 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: NEDD4L, KIAA0439, NEDL3;                                       
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 511693;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21;                                      
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PETM11;                                   
SOURCE  11 MOL_ID: 2;                                                           
SOURCE  12 SYNTHETIC: YES;                                                      
SOURCE  13 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE  14 ORGANISM_COMMON: HUMAN;                                              
SOURCE  15 ORGANISM_TAXID: 9606                                                 
KEYWDS    WW, NEDD4L, SMAD7, PROTEIN BINDING-PEPTIDE COMPLEX                    
EXPDTA    SOLUTION NMR                                                          
NUMMDL    30                                                                    
AUTHOR    M.J.MACIAS,E.ARAGON,N.GOERNER,Q.XI,T.LOPES,S.GAO,J.MASSAGUE           
REVDAT   1   21-NOV-12 2LTY    0                                                
JRNL        AUTH   E.ARAGON,N.GOERNER,Q.XI,T.GOMES,S.GAO,J.MASSAGUE,M.J.MACIAS  
JRNL        TITL   STRUCTURAL BASIS FOR THE VERSATILE INTERACTIONS OF SMAD7     
JRNL        TITL 2 WITH REGULATOR WW DOMAINS IN TGF-BETA PATHWAYS.              
JRNL        REF    STRUCTURE                     V.  20  1726 2012              
JRNL        REFN                   ISSN 0969-2126                               
JRNL        PMID   22921829                                                     
JRNL        DOI    10.1016/J.STR.2012.07.014                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNSSOLVE                                             
REMARK   3   AUTHORS     : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ         
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2LTY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-12.                  
REMARK 100 THE RCSB ID CODE IS RCSB102829.                                      
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 285                                
REMARK 210  PH                             : 7.2                                
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1 MM NEDD4LWW2, 2 MM SMAD7, 20     
REMARK 210                                   MM [U-100% 2H] TRIS, 100 MM        
REMARK 210                                   SODIUM CHLORIDE, 90% H2O/10% D2O;  
REMARK 210                                   1 MM [U-100% 13C; U-100% 15N]      
REMARK 210                                   NEDD4LWW2, 3 MM SMAD7, 20 MM [U-   
REMARK 210                                   100% 2H] TRIS, 100 MM SODIUM       
REMARK 210                                   CHLORIDE, 90% H2O/10% D2O          
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 2D 1H-1H TOCSY;    
REMARK 210                                   2D 1H-1H NOESY; 3D CBCA(CO)NH; 3D  
REMARK 210                                   HNCACB                             
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : TOPSPIN, NMRPIPE, CARA, CNSSOLVE   
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 300                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 30                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST ENERGY  
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ARG A 389       70.03     69.16                                   
REMARK 500  1 SER B 212      -75.25   -102.64                                   
REMARK 500  1 ARG B 213      -53.00   -120.28                                   
REMARK 500  2 ARG A 389       70.19     71.73                                   
REMARK 500  2 PRO B 208      155.36    -48.96                                   
REMARK 500  2 SER B 212      -75.40    -91.78                                   
REMARK 500  2 ARG B 213      -51.41   -120.23                                   
REMARK 500  3 ARG A 389       70.11     76.25                                   
REMARK 500  3 PRO B 208      150.73    -48.91                                   
REMARK 500  3 SER B 212      -75.37   -108.59                                   
REMARK 500  4 ARG A 389       70.24     80.06                                   
REMARK 500  4 SER B 212      -75.27    -95.15                                   
REMARK 500  5 ARG A 389       70.10     73.46                                   
REMARK 500  5 SER B 212      -75.24   -107.72                                   
REMARK 500  5 ARG B 213      -55.81   -120.31                                   
REMARK 500  6 ARG A 389       70.42     75.15                                   
REMARK 500  6 SER B 212      -72.01   -112.54                                   
REMARK 500  6 ARG B 213      -52.79   -120.11                                   
REMARK 500  7 SER B 212      -75.22   -107.71                                   
REMARK 500  8 ARG A 389       70.25     80.52                                   
REMARK 500  8 ILE A 397      -61.82    -90.17                                   
REMARK 500  8 SER B 212      -75.04   -116.06                                   
REMARK 500  9 ARG A 389       67.51     69.62                                   
REMARK 500  9 PRO B 208      153.55    -49.06                                   
REMARK 500  9 SER B 212      -70.83   -112.63                                   
REMARK 500 10 ARG A 389       37.35     70.92                                   
REMARK 500 10 SER B 212      -75.16    -97.71                                   
REMARK 500 11 ARG A 389       39.96     72.14                                   
REMARK 500 11 SER B 212      -75.19    -94.71                                   
REMARK 500 11 ARG B 213      -54.09   -120.36                                   
REMARK 500 12 ARG A 389       70.31     75.98                                   
REMARK 500 12 ILE A 397      -63.82    -90.04                                   
REMARK 500 12 SER B 212      -75.31    -94.57                                   
REMARK 500 12 ARG B 213      -52.77   -120.42                                   
REMARK 500 13 ARG A 389       70.27     82.83                                   
REMARK 500 13 PRO B 208      159.83    -49.45                                   
REMARK 500 13 SER B 212      -75.21    -95.05                                   
REMARK 500 13 ARG B 213      -52.82   -120.29                                   
REMARK 500 14 ARG A 389       70.08     81.10                                   
REMARK 500 14 SER B 212      -75.50   -110.47                                   
REMARK 500 15 ASN A 387      -83.57    -59.84                                   
REMARK 500 15 ARG A 389       70.48     81.90                                   
REMARK 500 15 SER B 212      -73.41    -97.83                                   
REMARK 500 15 ARG B 213      -56.07   -120.05                                   
REMARK 500 16 ARG A 389       70.26     82.10                                   
REMARK 500 16 PRO B 208      156.55    -49.81                                   
REMARK 500 16 SER B 212      -75.68    -97.95                                   
REMARK 500 17 ARG A 389       70.32     76.69                                   
REMARK 500 17 PRO B 208      152.66    -49.43                                   
REMARK 500 17 SER B 212      -75.37   -102.15                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      89 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 18501   RELATED DB: BMRB                                 
REMARK 900 RELATED ID: 2LTV   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 2LTW   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 2LTX   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 2LTZ   RELATED DB: PDB                                   
DBREF  2LTY A  365   397  UNP    Q96PU5   NED4L_HUMAN    385    417             
DBREF  2LTY B  203   217  UNP    O15105   SMAD7_HUMAN    203    217             
SEQADV 2LTY GLY A  398  UNP  Q96PU5              EXPRESSION TAG                 
SEQRES   1 A   34  PRO GLY LEU PRO SER GLY TRP GLU GLU ARG LYS ASP ALA          
SEQRES   2 A   34  LYS GLY ARG THR TYR TYR VAL ASN HIS ASN ASN ARG THR          
SEQRES   3 A   34  THR THR TRP THR ARG PRO ILE GLY                              
SEQRES   1 B   15  GLU LEU GLU SER PRO PRO PRO PRO TYR SER ARG TYR PRO          
SEQRES   2 B   15  MET ASP                                                      
SHEET    1   A 3 TRP A 371  ASP A 376  0                                        
SHEET    2   A 3 ARG A 380  ASN A 385 -1  O  ARG A 380   N  ASP A 376           
SHEET    3   A 3 THR A 390  THR A 392 -1  O  THR A 390   N  ASN A 385           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000