PDB Short entry for 2LTZ HEADER PROTEIN BINDING/PEPTIDE 04-JUN-12 2LTZ TITLE SMURF2 WW3 DOMAIN IN COMPLEX WITH A SMAD7 DERIVED PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE SMURF2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: WW3 DOMAIN (UNP RESIDUES 297-333); COMPND 5 SYNONYM: HSMURF2, SMAD UBIQUITINATION REGULATORY FACTOR 2, SMAD- COMPND 6 SPECIFIC E3 UBIQUITIN-PROTEIN LIGASE 2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SMAD7 DERIVED PEPTIDE; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 203-217; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SMURF2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM11; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS WW, SMURF2, SMAD7, PROTEIN BINDING-PEPTIDE COMPLEX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.J.MACIAS,E.ARAGON,N.GOERNER,Q.XI,T.LOPES,S.GAO,J.MASSAGUE REVDAT 2 01-MAY-24 2LTZ 1 REMARK REVDAT 1 21-NOV-12 2LTZ 0 JRNL AUTH E.ARAGON,N.GOERNER,Q.XI,T.GOMES,S.GAO,J.MASSAGUE,M.J.MACIAS JRNL TITL STRUCTURAL BASIS FOR THE VERSATILE INTERACTIONS OF SMAD7 JRNL TITL 2 WITH REGULATOR WW DOMAINS IN TGF-BETA PATHWAYS. JRNL REF STRUCTURE V. 20 1726 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22921829 JRNL DOI 10.1016/J.STR.2012.07.014 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN, CNSSOLVE REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), BRUNGER, ADAMS, CLORE, REMARK 3 GROS, NILGES AND READ (CNSSOLVE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LTZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000102830. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 285 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM SMURF2WW3, 2 MM SMAD7, 20 REMARK 210 MM [U-100% 2H] TRIS, 100 MM REMARK 210 SODIUM CHLORIDE, 90% H2O/10% D2O; REMARK 210 1 MM [U-100% 13C; U-100% 15N] REMARK 210 SMURF2WW3, 3 MM SMAD7, 20 MM [U- REMARK 210 100% 2H] TRIS, 100 MM SODIUM REMARK 210 CHLORIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-1H TOCSY; REMARK 210 2D 1H-1H NOESY; 3D CBCA(CO)NH; REMARK 210 3D HNCACB REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, CARA, CNSSOLVE REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 300 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG B 213 HE1 TYR B 214 1.08 REMARK 500 HE2 TYR A 314 HG2 PRO B 215 1.10 REMARK 500 HB VAL A 316 HE1 TYR B 211 1.30 REMARK 500 HH12 ARG A 306 O ASP B 217 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 298 1.98 -68.89 REMARK 500 1 SER B 206 153.60 -48.87 REMARK 500 1 TYR B 211 94.94 -65.11 REMARK 500 2 SER B 206 152.18 -49.04 REMARK 500 2 TYR B 211 94.81 -64.90 REMARK 500 3 ASN A 319 -70.50 -65.46 REMARK 500 3 ARG A 321 60.49 68.75 REMARK 500 3 ALA A 332 -70.45 -91.16 REMARK 500 4 TYR B 211 97.57 -61.87 REMARK 500 5 SER B 206 154.40 -48.94 REMARK 500 5 TYR B 211 97.48 -59.94 REMARK 500 6 ASN A 319 -75.48 -73.24 REMARK 500 6 ARG A 321 61.31 67.12 REMARK 500 6 SER B 206 159.16 -49.33 REMARK 500 6 TYR B 211 91.75 -64.55 REMARK 500 7 ARG A 321 52.67 71.68 REMARK 500 7 SER B 206 157.50 -48.81 REMARK 500 8 TYR B 211 95.30 -69.87 REMARK 500 10 SER B 206 159.01 -48.95 REMARK 500 10 TYR B 211 92.61 -69.95 REMARK 500 11 SER B 206 151.68 -48.88 REMARK 500 11 TYR B 211 91.21 -67.58 REMARK 500 12 ARG A 321 40.70 70.01 REMARK 500 12 SER B 206 155.00 -49.87 REMARK 500 13 PRO A 298 102.81 -59.66 REMARK 500 13 ARG A 321 50.23 71.35 REMARK 500 13 SER B 206 158.36 -49.14 REMARK 500 13 TYR B 211 91.06 -68.60 REMARK 500 14 SER B 206 152.53 -49.21 REMARK 500 15 TYR B 211 98.14 -61.50 REMARK 500 16 SER B 206 156.70 -49.52 REMARK 500 17 PRO A 298 -93.62 -75.02 REMARK 500 17 SER B 206 151.86 -49.15 REMARK 500 18 SER B 206 155.00 -49.13 REMARK 500 19 ARG A 321 44.27 71.67 REMARK 500 20 ALA A 332 -70.10 -88.92 REMARK 500 20 SER B 206 151.97 -49.01 REMARK 500 20 TYR B 211 94.99 -64.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18502 RELATED DB: BMRB REMARK 900 RELATED ID: 2LTV RELATED DB: PDB REMARK 900 RELATED ID: 2LTW RELATED DB: PDB REMARK 900 RELATED ID: 2LTX RELATED DB: PDB REMARK 900 RELATED ID: 2LTY RELATED DB: PDB DBREF 2LTZ A 297 333 UNP Q9HAU4 SMUF2_HUMAN 297 333 DBREF 2LTZ B 203 217 UNP O15105 SMAD7_HUMAN 203 217 SEQRES 1 A 37 GLY PRO LEU PRO PRO GLY TRP GLU ILE ARG ASN THR ALA SEQRES 2 A 37 THR GLY ARG VAL TYR PHE VAL ASP HIS ASN ASN ARG THR SEQRES 3 A 37 THR GLN PHE THR ASP PRO ARG LEU SER ALA ASN SEQRES 1 B 15 GLU LEU GLU SER PRO PRO PRO PRO TYR SER ARG TYR PRO SEQRES 2 B 15 MET ASP SHEET 1 A 3 TRP A 303 THR A 308 0 SHEET 2 A 3 ARG A 312 ASP A 317 -1 O ARG A 312 N THR A 308 SHEET 3 A 3 THR A 322 GLN A 324 -1 O THR A 322 N ASP A 317 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000