PDB Short entry for 2MAK HEADER SIGNALING PROTEIN/TRANSPORT PROTEIN 12-JUL-13 2MAK TITLE SOLUTION STRUCTURE OF THE STIM1 CC1-CC2 HOMODIMER IN COMPLEX WITH TWO TITLE 2 ORAI1 C-TERMINAL DOMAINS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: STROMAL INTERACTION MOLECULE 1; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 312-387; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1; COMPND 8 CHAIN: B, D; COMPND 9 FRAGMENT: ORAI1 C-TERMINAL DOMAIN, UNP RESIDUES 272-292; COMPND 10 SYNONYM: PROTEIN ORAI-1, TRANSMEMBRANE PROTEIN 142A; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: STIM1, GOK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-28A; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: ORAI1, CRACM1, TMEM142A; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VECTOR: PGEX-4T1 KEYWDS STIM1, ORAI1, COILED-COIL, ORAI1 C-TERMINAL DOMAIN, TRANSPORT KEYWDS 2 PROTEIN, SIGNALING PROTEIN-TRANSPORT PROTEIN COMPLEX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.B.STATHOPULOS,M.IKURA REVDAT 1 15-JAN-14 2MAK 0 JRNL AUTH P.B.STATHOPULOS,R.SCHINDL,M.FAHRNER,L.ZHENG, JRNL AUTH 2 G.M.GASMI-SEABROOK,M.MUIK,C.ROMANIN,M.IKURA JRNL TITL STIM1/ORAI1 COILED-COIL INTERPLAY IN THE REGULATION OF JRNL TITL 2 STORE-OPERATED CALCIUM ENTRY. JRNL REF NAT COMMUN V. 4 2963 2013 JRNL REFN ESSN 2041-1723 JRNL PMID 24351972 JRNL DOI 10.1038/NCOMMS3963 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USED THE RECOORD SCRIPTS IN CNS TO REMARK 3 WATER REFINE THE CYANA-DETERMINED STRUCTURES (NEDERVEEN ET AL., REMARK 3 PROTEINS. 2005 JUN 1;59(4):662-72). REMARK 4 REMARK 4 2MAK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-13. REMARK 100 THE RCSB ID CODE IS RCSB103414. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 0.02 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.25 MM [U-100% 15N] PROTEIN_1, REMARK 210 3.0 MM PROTEIN_2, 20 MM BIS-TRIS, REMARK 210 0.175 V/V [U-99% 2H] TFE, 90% REMARK 210 H2O/10% D2O; 0.25 MM [U-99% 13C; REMARK 210 U-99% 15N] PROTEIN_1, 3.0 MM REMARK 210 PROTEIN_2, 20 MM BIS-TRIS, 0.175 REMARK 210 V/V [U-99% 2H] TFE, 90% H2O/10% REMARK 210 D2O; 0.25 MM [U-99% 13C; U-99% REMARK 210 15N] PROTEIN_1, 3.0 MM PROTEIN_2, REMARK 210 20 MM BIS-TRIS, 0.175 V/V [U-99% REMARK 210 2H] TFE, 100% D2O; 2.5 MM REMARK 210 PROTEIN_1, 0.25 MM [U-99% 15N] REMARK 210 PROTEIN_2, 20 MM BIS-TRIS, 0.175 REMARK 210 V/V [U-99% 2H] TFE, 90% H2O/10% REMARK 210 D2O; 2.5 MM PROTEIN_1, 0.25 MM [U REMARK 210 -99% 13C; U-99% 15N] PROTEIN_2, REMARK 210 20 MM BIS-TRIS, 0.175 V/V [U-99% REMARK 210 2H] TFE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HNCO; 3D C(CO)NH REMARK 210 TOCSY; 3D H(CCO)NH TOCSY; 3D 1H- REMARK 210 15N NOESY; 2D 1H-13C HSQC; 3D 1H- REMARK 210 13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, XEASY, TALOS, CYANA REMARK 210 3.0, CNS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG C 329 OE1 GLU C 332 1.59 REMARK 500 HZ3 LYS A 366 OE1 GLU D 272 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 384 110.11 167.58 REMARK 500 1 LYS C 384 129.53 173.31 REMARK 500 1 HIS D 288 32.38 -97.76 REMARK 500 2 LYS A 384 115.58 160.51 REMARK 500 2 ALA C -1 -166.15 -101.02 REMARK 500 2 LYS C 384 119.48 162.50 REMARK 500 3 MET A -2 79.10 -108.58 REMARK 500 3 ILE A 383 -68.57 -90.65 REMARK 500 3 LYS A 384 146.41 -176.19 REMARK 500 3 HIS B 288 31.82 -99.44 REMARK 500 3 MET C -2 72.51 -101.38 REMARK 500 3 SER C 0 99.20 -69.07 REMARK 500 3 LYS C 384 142.22 -176.21 REMARK 500 4 ARG A 313 29.30 -76.00 REMARK 500 4 TYR A 342 -159.84 -119.74 REMARK 500 4 ILE A 383 -70.15 -89.55 REMARK 500 4 LYS A 384 177.27 164.90 REMARK 500 4 ARG C 313 27.83 -77.79 REMARK 500 4 TYR C 342 -160.96 -125.11 REMARK 500 4 ILE C 383 -70.06 -87.06 REMARK 500 4 LYS C 384 -178.50 164.53 REMARK 500 5 MET A -2 75.38 -109.18 REMARK 500 5 ALA A -1 28.14 -142.18 REMARK 500 5 MET C -2 72.22 -108.55 REMARK 500 5 ALA C -1 27.15 -142.29 REMARK 500 5 ILE C 383 -67.54 -90.70 REMARK 500 5 SER D 0 -167.78 -101.40 REMARK 500 5 HIS D 288 32.26 -95.94 REMARK 500 6 LYS A 384 125.48 174.90 REMARK 500 6 HIS B 288 32.43 -96.32 REMARK 500 6 LYS C 384 124.11 174.04 REMARK 500 6 HIS D 288 31.96 -97.26 REMARK 500 7 MET A -2 72.26 59.69 REMARK 500 7 TYR A 342 -169.90 -118.89 REMARK 500 7 LYS A 384 114.26 170.90 REMARK 500 7 MET C -2 70.61 59.61 REMARK 500 7 TYR C 342 -167.79 -121.59 REMARK 500 7 LYS C 384 110.65 167.87 REMARK 500 8 TYR A 342 -162.43 -128.84 REMARK 500 8 ILE A 383 -67.92 -96.13 REMARK 500 8 ILE C 383 -68.03 -94.52 REMARK 500 9 LYS A 384 114.02 166.29 REMARK 500 9 SER C 312 79.43 -69.20 REMARK 500 9 LYS C 384 115.53 165.09 REMARK 500 10 TYR A 342 -165.92 -115.84 REMARK 500 10 LYS A 384 104.22 75.29 REMARK 500 10 LYS A 385 -70.80 -104.63 REMARK 500 10 LYS C 384 109.89 76.38 REMARK 500 10 LYS C 385 -66.92 -108.22 REMARK 500 11 TYR A 342 -165.61 -120.66 REMARK 500 REMARK 500 THIS ENTRY HAS 105 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 3 ARG B 289 0.07 SIDE CHAIN REMARK 500 4 ARG A 329 0.08 SIDE CHAIN REMARK 500 4 ARG C 329 0.08 SIDE CHAIN REMARK 500 5 ARG D 289 0.08 SIDE CHAIN REMARK 500 9 ARG D 289 0.08 SIDE CHAIN REMARK 500 11 ARG A 313 0.09 SIDE CHAIN REMARK 500 12 ARG C 329 0.08 SIDE CHAIN REMARK 500 14 ARG A 329 0.12 SIDE CHAIN REMARK 500 14 ARG C 329 0.12 SIDE CHAIN REMARK 500 15 ARG B 289 0.10 SIDE CHAIN REMARK 500 15 ARG D 289 0.08 SIDE CHAIN REMARK 500 19 ARG B 289 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 4 LEU A 321 22.4 L L OUTSIDE RANGE REMARK 500 4 HIS A 338 24.9 L L OUTSIDE RANGE REMARK 500 4 LEU C 321 21.9 L L OUTSIDE RANGE REMARK 500 4 LYS C 365 24.8 L L OUTSIDE RANGE REMARK 500 9 LEU A 321 25.0 L L OUTSIDE RANGE REMARK 500 16 LYS A 365 24.8 L L OUTSIDE RANGE REMARK 500 16 LYS C 365 24.8 L L OUTSIDE RANGE REMARK 500 17 LYS C 365 24.2 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2MAJ RELATED DB: PDB REMARK 900 THIS PDB REPRESENTS THE STIM1 CC1-CC2 HOMODIMER IN THE REMARK 900 ABSENCE OF ORAI1 (I.E. THE APO STATE). REMARK 900 RELATED ID: 19362 RELATED DB: BMRB REMARK 900 THIS NMR DATA WAS USED TO CALCULATE THE STIM1 CC1-CC2 REMARK 900 HOMODIMER IN THE ABSENCE OF ORAI1 (I.E. THE APO STATE). REMARK 900 RELATED ID: 19363 RELATED DB: BMRB DBREF 2MAK A 312 387 UNP Q13586 STIM1_HUMAN 312 387 DBREF 2MAK B 272 292 UNP Q96D31 CRCM1_HUMAN 272 292 DBREF 2MAK C 312 387 UNP Q13586 STIM1_HUMAN 312 387 DBREF 2MAK D 272 292 UNP Q96D31 CRCM1_HUMAN 272 292 SEQADV 2MAK GLY A -5 UNP Q13586 EXPRESSION TAG SEQADV 2MAK SER A -4 UNP Q13586 EXPRESSION TAG SEQADV 2MAK HIS A -3 UNP Q13586 EXPRESSION TAG SEQADV 2MAK MET A -2 UNP Q13586 EXPRESSION TAG SEQADV 2MAK ALA A -1 UNP Q13586 EXPRESSION TAG SEQADV 2MAK SER A 0 UNP Q13586 EXPRESSION TAG SEQADV 2MAK GLY B -1 UNP Q96D31 EXPRESSION TAG SEQADV 2MAK SER B 0 UNP Q96D31 EXPRESSION TAG SEQADV 2MAK GLY C -5 UNP Q13586 EXPRESSION TAG SEQADV 2MAK SER C -4 UNP Q13586 EXPRESSION TAG SEQADV 2MAK HIS C -3 UNP Q13586 EXPRESSION TAG SEQADV 2MAK MET C -2 UNP Q13586 EXPRESSION TAG SEQADV 2MAK ALA C -1 UNP Q13586 EXPRESSION TAG SEQADV 2MAK SER C 0 UNP Q13586 EXPRESSION TAG SEQADV 2MAK GLY D -1 UNP Q96D31 EXPRESSION TAG SEQADV 2MAK SER D 0 UNP Q96D31 EXPRESSION TAG SEQRES 1 A 82 GLY SER HIS MET ALA SER SER ARG GLN LYS TYR ALA GLU SEQRES 2 A 82 GLU GLU LEU GLU GLN VAL ARG GLU ALA LEU ARG LYS ALA SEQRES 3 A 82 GLU LYS GLU LEU GLU SER HIS SER SER TRP TYR ALA PRO SEQRES 4 A 82 GLU ALA LEU GLN LYS TRP LEU GLN LEU THR HIS GLU VAL SEQRES 5 A 82 GLU VAL GLN TYR TYR ASN ILE LYS LYS GLN ASN ALA GLU SEQRES 6 A 82 LYS GLN LEU LEU VAL ALA LYS GLU GLY ALA GLU LYS ILE SEQRES 7 A 82 LYS LYS LYS ARG SEQRES 1 B 23 GLY SER GLU LEU ASN GLU LEU ALA GLU PHE ALA ARG LEU SEQRES 2 B 23 GLN ASP GLN LEU ASP HIS ARG GLY ASP HIS SEQRES 1 C 82 GLY SER HIS MET ALA SER SER ARG GLN LYS TYR ALA GLU SEQRES 2 C 82 GLU GLU LEU GLU GLN VAL ARG GLU ALA LEU ARG LYS ALA SEQRES 3 C 82 GLU LYS GLU LEU GLU SER HIS SER SER TRP TYR ALA PRO SEQRES 4 C 82 GLU ALA LEU GLN LYS TRP LEU GLN LEU THR HIS GLU VAL SEQRES 5 C 82 GLU VAL GLN TYR TYR ASN ILE LYS LYS GLN ASN ALA GLU SEQRES 6 C 82 LYS GLN LEU LEU VAL ALA LYS GLU GLY ALA GLU LYS ILE SEQRES 7 C 82 LYS LYS LYS ARG SEQRES 1 D 23 GLY SER GLU LEU ASN GLU LEU ALA GLU PHE ALA ARG LEU SEQRES 2 D 23 GLN ASP GLN LEU ASP HIS ARG GLY ASP HIS HELIX 1 1 ARG A 313 LYS A 315 5 3 HELIX 2 2 TYR A 316 SER A 339 1 24 HELIX 3 3 SER A 340 TYR A 342 5 3 HELIX 4 4 ALA A 343 LYS A 384 1 42 HELIX 5 5 SER B 0 ARG B 289 1 19 HELIX 6 6 ARG C 313 LYS C 315 5 3 HELIX 7 7 TYR C 316 SER C 339 1 24 HELIX 8 8 SER C 340 TYR C 342 5 3 HELIX 9 9 ALA C 343 LYS C 384 1 42 HELIX 10 10 SER D 0 ARG D 289 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000