PDB Short entry for 2MKV HEADER TRANSPORT PROTEIN 13-FEB-14 2MKV TITLE STRUCTURE OF THE NA,K-ATPASE REGULATORY PROTEIN FXYD2B IN MICELLES COMPND MOL_ID: 1; COMPND 2 MOLECULE: SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT GAMMA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 9-66; COMPND 5 SYNONYM: NA(+)/K(+) ATPASE SUBUNIT GAMMA, FXYD DOMAIN-CONTAINING ION COMPND 6 TRANSPORT REGULATOR 2, SODIUM PUMP GAMMA CHAIN; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ATP1C, ATP1G1, FXYD2, FXYD2B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C41 DE3; SOURCE 9 OTHER_DETAILS: SEQUENCE CONTAINS THE MUTATIONS M1L AND C50S KEYWDS FXYD2B, NA, K-ATPASE, FXYD, MICELLE, TRANSPORT PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR F.M.MARASSI,X.GONG REVDAT 4 14-JUN-23 2MKV 1 REMARK SEQADV REVDAT 3 24-DEC-14 2MKV 1 JRNL REVDAT 2 21-MAY-14 2MKV 1 JRNL REVDAT 1 14-MAY-14 2MKV 0 JRNL AUTH X.M.GONG,Y.DING,J.YU,Y.YAO,F.M.MARASSI JRNL TITL STRUCTURE OF THE NA,K-ATPASE REGULATORY PROTEIN FXYD2B IN JRNL TITL 2 MICELLES: IMPLICATIONS FOR MEMBRANE-WATER INTERFACIAL JRNL TITL 3 ARGININES. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1848 299 2015 JRNL REFN ISSN 0006-3002 JRNL PMID 24794573 JRNL DOI 10.1016/J.BBAMEM.2014.04.021 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH, X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH), SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X- REMARK 3 PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STANDARD SIMULATED ANNEALING PROTOCOL REMARK 3 FOR FOLDING AND REFINEMENT REMARK 4 REMARK 4 2MKV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000103736. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.2 MM [U-99% 13C; U-99% 15N] REMARK 210 H2O, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D REMARK 210 CBCA(CO)NH; 3D C(CO)NH; 3D HNCO; REMARK 210 3D H(CCO)NH; 2D 1H-1H TOCSY; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 10 -172.26 -58.57 REMARK 500 1 ASP A 13 -74.17 -85.88 REMARK 500 1 PRO A 16 32.14 -83.90 REMARK 500 1 LYS A 54 80.10 42.20 REMARK 500 1 ARG A 57 54.36 38.17 REMARK 500 2 LEU A 6 -134.61 -116.90 REMARK 500 2 ASN A 53 -147.84 69.97 REMARK 500 3 PRO A 10 -84.24 -67.96 REMARK 500 3 PRO A 16 31.67 -84.12 REMARK 500 3 SER A 50 175.86 76.27 REMARK 500 4 PRO A 10 -153.36 -63.96 REMARK 500 5 LEU A 6 143.55 -34.27 REMARK 500 5 PRO A 10 -85.02 -68.62 REMARK 500 5 ASP A 13 51.50 -160.24 REMARK 500 5 VAL A 24 -23.73 -38.27 REMARK 500 5 SER A 50 40.55 85.72 REMARK 500 5 ARG A 57 -130.35 35.02 REMARK 500 5 ILE A 59 -32.04 -130.92 REMARK 500 6 LEU A 6 159.88 -47.50 REMARK 500 6 ARG A 57 -138.76 90.29 REMARK 500 6 GLU A 61 -122.18 37.35 REMARK 500 6 ASP A 62 -128.97 42.64 REMARK 500 7 ARG A 3 65.27 60.83 REMARK 500 7 PRO A 16 34.88 -83.27 REMARK 500 7 LYS A 54 58.67 -141.23 REMARK 500 8 ARG A 3 -146.67 39.91 REMARK 500 8 ASN A 53 88.38 -45.66 REMARK 500 8 LYS A 54 98.32 44.86 REMARK 500 8 ARG A 57 -150.62 55.69 REMARK 500 9 ARG A 3 171.29 62.71 REMARK 500 9 ASP A 15 58.56 -162.74 REMARK 500 9 PHE A 17 -1.10 -57.48 REMARK 500 9 SER A 50 -113.16 35.10 REMARK 500 10 ARG A 3 69.81 -164.67 REMARK 500 10 LEU A 6 143.67 -38.48 REMARK 500 10 ASP A 13 32.76 -142.83 REMARK 500 10 SER A 50 -150.93 -81.18 REMARK 500 10 ASN A 53 84.59 57.27 REMARK 500 10 LYS A 54 60.52 -69.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JO1 RELATED DB: PDB REMARK 900 FXYD1 REMARK 900 RELATED ID: 2JP3 RELATED DB: PDB REMARK 900 FXYD4 REMARK 900 RELATED ID: 19797 RELATED DB: BMRB DBREF 2MKV A 1 64 UNP P54710 ATNG_HUMAN 1 64 SEQADV 2MKV LEU A 1 UNP P54710 MET 1 ENGINEERED MUTATION SEQADV 2MKV SER A 50 UNP P54710 CYS 50 ENGINEERED MUTATION SEQRES 1 A 64 LEU ASP ARG TRP TYR LEU GLY GLY SER PRO LYS GLY ASP SEQRES 2 A 64 VAL ASP PRO PHE TYR TYR ASP TYR GLU THR VAL ARG ASN SEQRES 3 A 64 GLY GLY LEU ILE PHE ALA GLY LEU ALA PHE ILE VAL GLY SEQRES 4 A 64 LEU LEU ILE LEU LEU SER ARG ARG PHE ARG SER GLY GLY SEQRES 5 A 64 ASN LYS LYS ARG ARG GLN ILE ASN GLU ASP GLU PRO HELIX 1 1 PHE A 17 GLU A 22 1 6 HELIX 2 2 THR A 23 SER A 50 1 28 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000