PDB Short entry for 2N90
HEADER    TRANSFERASE                             29-OCT-15   2N90              
TITLE     TRKA TRANSMEMBRANE DOMAIN NMR STRUCTURE IN DPC MICELLES               
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: HIGH AFFINITY NERVE GROWTH FACTOR RECEPTOR;                
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 SYNONYM: NEUROTROPHIC TYROSINE KINASE RECEPTOR TYPE 1, TRK1-         
COMPND   5 TRANSFORMING TYROSINE KINASE PROTEIN, TROPOMYOSIN-RELATED KINASE A,  
COMPND   6 TYROSINE KINASE RECEPTOR, TYROSINE KINASE RECEPTOR A, TRK-A,         
COMPND   7 GP140TRK, P140-TRKA;                                                 
COMPND   8 EC: 2.7.10.1;                                                        
COMPND   9 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: NTRK1, MTC, TRK, TRKA;                                         
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_VECTOR: PGEMEX-1                                   
KEYWDS    NEUROTROPHIN RECEPTOR, TRANSFERASE                                    
EXPDTA    SOLUTION NMR                                                          
NUMMDL    10                                                                    
AUTHOR    K.NADEZHDIN,S.GONCHARUK,A.ARSENIEV                                    
REVDAT   3   14-JUN-23 2N90    1       REMARK                                   
REVDAT   2   10-FEB-21 2N90    1       JRNL   REMARK SEQADV                     
REVDAT   1   09-NOV-16 2N90    0                                                
JRNL        AUTH   M.L.FRANCO,K.D.NADEZHDIN,S.A.GONCHARUK,K.S.MINEEV,           
JRNL        AUTH 2 A.S.ARSENIEV,M.VILAR                                         
JRNL        TITL   STRUCTURAL BASIS OF THE TRANSMEMBRANE DOMAIN DIMERIZATION    
JRNL        TITL 2 AND ROTATION IN THE ACTIVATION MECHANISM OF THE TRKA         
JRNL        TITL 3 RECEPTOR BY NERVE GROWTH FACTOR.                             
JRNL        REF    J.BIOL.CHEM.                  V. 295   275 2020              
JRNL        REFN                   ESSN 1083-351X                               
JRNL        PMID   31801826                                                     
JRNL        DOI    10.1074/JBC.RA119.011312                                     
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : TOPSPIN, CYANA                                       
REMARK   3   AUTHORS     : BRUKER BIOSPIN (TOPSPIN), GUNTERT, MUMENTHALER AND   
REMARK   3                 WUTHRICH (CYANA)                                     
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2N90 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-NOV-15.                  
REMARK 100 THE DEPOSITION ID IS D_1000104573.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 318                                
REMARK 210  PH                             : 5.9                                
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1 MM [U-100% 13C; U-100% 15N]      
REMARK 210                                   PROTEIN, 1 MM PROTEIN, 40 MM [U-   
REMARK 210                                   100% 2H] DPC, 20 MM POTASSIUM      
REMARK 210                                   PHOSPHATE, 95% H2O/5% D2O          
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 2D 1H-13C HSQC;    
REMARK 210                                   3D HNCO; 3D HNCA; 3D HNCACB; 3D    
REMARK 210                                   HNHA; 3D 1H-15N NOESY; 3D 1H-13C   
REMARK 210                                   NOESY; 3D HN(CO)CA                 
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ; 600 MHZ                   
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : TOPSPIN, CYANA, MOLMOL, CARA       
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 10                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : TARGET FUNCTION                    
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ASP A   4     -177.65    -68.79                                   
REMARK 500  1 GLU A   5       76.24   -167.36                                   
REMARK 500  1 GLU B 105       73.68   -171.03                                   
REMARK 500  2 GLU A   5      -70.95    -58.35                                   
REMARK 500  2 ALA A  34      102.30   -161.06                                   
REMARK 500  2 ALA B 134      101.26   -162.94                                   
REMARK 500  3 PHE A   8      114.30   -178.25                                   
REMARK 500  3 PHE B 108      114.15   -179.07                                   
REMARK 500  5 GLU A   5       74.30   -172.93                                   
REMARK 500  5 ALA A  34      104.77   -164.87                                   
REMARK 500  5 GLU B 105       72.20   -174.37                                   
REMARK 500  5 ALA B 134      106.35   -174.74                                   
REMARK 500  6 GLU A   5       79.23   -167.56                                   
REMARK 500  6 GLU B 105       76.80   -168.78                                   
REMARK 500  7 GLU A   5       83.71   -170.89                                   
REMARK 500  7 GLU B 105       81.94   -171.91                                   
REMARK 500  8 ALA B 134       94.72   -161.15                                   
REMARK 500  9 GLU A   5       90.54   -166.06                                   
REMARK 500  9 GLU B 105       89.01   -168.72                                   
REMARK 500 10 GLU A   5       84.58   -172.16                                   
REMARK 500 10 GLU B 105       79.95   -173.43                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 25872   RELATED DB: BMRB                                 
DBREF  2N90 A    2    39  UNP    P04629   NTRK1_HUMAN    410    447             
DBREF  2N90 B  102   139  UNP    P04629   NTRK1_HUMAN    410    447             
SEQADV 2N90 MET A    1  UNP  P04629              EXPRESSION TAG                 
SEQADV 2N90 ALA A   34  UNP  P04629    CYS   442 CONFLICT                       
SEQADV 2N90 MET B  101  UNP  P04629              EXPRESSION TAG                 
SEQADV 2N90 ALA B  134  UNP  P04629    CYS   442 CONFLICT                       
SEQRES   1 A   39  MET LYS LYS ASP GLU THR PRO PHE GLY VAL SER VAL ALA          
SEQRES   2 A   39  VAL GLY LEU ALA VAL PHE ALA CYS LEU PHE LEU SER THR          
SEQRES   3 A   39  LEU LEU LEU VAL LEU ASN LYS ALA GLY ARG ARG ASN LYS          
SEQRES   1 B   39  MET LYS LYS ASP GLU THR PRO PHE GLY VAL SER VAL ALA          
SEQRES   2 B   39  VAL GLY LEU ALA VAL PHE ALA CYS LEU PHE LEU SER THR          
SEQRES   3 B   39  LEU LEU LEU VAL LEU ASN LYS ALA GLY ARG ARG ASN LYS          
HELIX    1   1 GLY A    9  ALA A   34  1                                  26    
HELIX    2   2 GLY B  109  ALA B  134  1                                  26    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000