PDB Short entry for 2O02 HEADER PROTEIN BINDING/TOXIN 27-NOV-06 2O02 TITLE PHOSPHORYLATION INDEPENDENT INTERACTIONS BETWEEN 14-3-3 AND EXOENZYME TITLE 2 S: FROM STRUCTURE TO PATHOGENESIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN ZETA/DELTA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN KINASE C INHIBITOR PROTEIN 1, KCIP-1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: EXOS (416-430) PEPTIDE; COMPND 8 CHAIN: P, Q; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: YWHAZ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX 2TK; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: CHEMICALLY SYNTHESIZED. KEYWDS 14-3-3, ADAPTER PROTEIN, EXOS, PATHOGEN, PROTEIN BINDING-TOXIN KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.OTTMANN,L.YASMIN,M.WEYAND,A.R.HAUSER,A.WITTINGHOFER,B.HALLBERG REVDAT 4 27-DEC-23 2O02 1 REMARK REVDAT 3 18-OCT-17 2O02 1 REMARK REVDAT 2 24-FEB-09 2O02 1 VERSN REVDAT 1 27-NOV-07 2O02 0 JRNL AUTH C.OTTMANN,L.YASMIN,M.WEYAND,J.L.VEESENMEYER,M.H.DIAZ, JRNL AUTH 2 R.H.PALMER,M.S.FRANCIS,A.R.HAUSER,A.WITTINGHOFER,B.HALLBERG JRNL TITL PHOSPHORYLATION-INDEPENDENT INTERACTION BETWEEN 14-3-3 AND JRNL TITL 2 EXOENZYME S: FROM STRUCTURE TO PATHOGENESIS JRNL REF EMBO J. V. 26 902 2007 JRNL REFN ISSN 0261-4189 JRNL PMID 17235285 JRNL DOI 10.1038/SJ.EMBOJ.7601530 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 103941 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5198 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7145 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1750 REMARK 3 BIN FREE R VALUE SET COUNT : 377 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3805 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 721 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : -0.45000 REMARK 3 B33 (A**2) : 0.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.072 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.052 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.121 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4273 ; 0.032 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5827 ; 2.558 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 592 ; 5.322 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 218 ;35.804 ;25.596 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 886 ;16.769 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;18.788 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 646 ; 0.176 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3257 ; 0.015 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2224 ; 0.242 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2920 ; 0.318 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 559 ; 0.247 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 67 ; 0.279 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 45 ; 0.317 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2690 ; 3.381 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4177 ; 4.449 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1847 ; 6.416 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1587 ; 8.593 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4537 ; 3.850 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 721 ;14.256 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4161 ; 9.916 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O02 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040516. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97883 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 103943 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.31400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.66500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.83200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.11900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.83200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.66500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.11900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, P, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 69 REMARK 465 GLU A 70 REMARK 465 GLY A 71 REMARK 465 ALA A 72 REMARK 465 GLU A 73 REMARK 465 LYS A 74 REMARK 465 GLY Q 417 REMARK 465 HIS Q 418 REMARK 465 GLY Q 419 REMARK 465 GLN Q 420 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 186 O HOH B 1074 1.66 REMARK 500 OG SER A 114 O HOH A 960 1.84 REMARK 500 OD2 ASP B 96 O HOH B 1023 1.91 REMARK 500 O GLN P 420 O HOH P 444 1.92 REMARK 500 O HOH A 871 O HOH A 1129 1.95 REMARK 500 OE2 GLU A 5 O HOH A 1114 1.96 REMARK 500 OE1 GLU A 154 O HOH A 897 1.98 REMARK 500 OG SER A 175 O HOH A 1117 2.03 REMARK 500 OE2 GLU B 186 O HOH B 1074 2.04 REMARK 500 CD GLU B 186 O HOH B 1074 2.05 REMARK 500 O HOH A 1034 O HOH A 1110 2.06 REMARK 500 O ALA A 133 O HOH A 1008 2.08 REMARK 500 OG SER B 156 O HOH B 919 2.10 REMARK 500 O HOH A 887 O HOH A 1109 2.10 REMARK 500 O HOH A 1107 O HOH A 1111 2.11 REMARK 500 O HOH B 916 O HOH B 1127 2.13 REMARK 500 CE LYS B 115 O HOH B 1119 2.15 REMARK 500 OG SER B 63 O HOH B 1090 2.15 REMARK 500 OE1 GLN A 147 O HOH A 824 2.16 REMARK 500 O HOH B 931 O HOH B 1125 2.17 REMARK 500 O HOH A 930 O HOH A 1136 2.17 REMARK 500 O HOH B 838 O HOH B 1121 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 193 O HOH A 1094 4445 1.77 REMARK 500 NZ LYS A 9 O HOH B 901 3454 1.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 8 CG GLN A 8 CD 0.187 REMARK 500 GLU A 14 CG GLU A 14 CD -0.110 REMARK 500 TYR A 48 CG TYR A 48 CD1 0.088 REMARK 500 ARG A 80 CG ARG A 80 CD 0.158 REMARK 500 LYS A 115 CE LYS A 115 NZ 0.157 REMARK 500 PHE A 117 CG PHE A 117 CD2 0.094 REMARK 500 TYR A 126 CE1 TYR A 126 CZ 0.079 REMARK 500 GLU A 131 CD GLU A 131 OE1 0.067 REMARK 500 GLU A 151 CD GLU A 151 OE2 0.067 REMARK 500 GLU A 208 CB GLU A 208 CG 0.179 REMARK 500 GLU A 208 CG GLU A 208 CD 0.139 REMARK 500 TYR B 19 CG TYR B 19 CD1 0.091 REMARK 500 GLU B 73 CG GLU B 73 CD 0.109 REMARK 500 GLU B 73 CD GLU B 73 OE1 0.094 REMARK 500 GLU B 73 CD GLU B 73 OE2 0.074 REMARK 500 GLU B 81 CD GLU B 81 OE1 0.074 REMARK 500 GLU B 87 CD GLU B 87 OE2 -0.080 REMARK 500 LYS B 115 CE LYS B 115 NZ 0.155 REMARK 500 SER B 145 CB SER B 145 OG -0.080 REMARK 500 TYR B 179 CE1 TYR B 179 CZ 0.087 REMARK 500 SER P 430 CB SER P 430 OG 0.085 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 41 NE - CZ - NH2 ANGL. DEV. = -6.2 DEGREES REMARK 500 LYS A 49 CD - CE - NZ ANGL. DEV. = 17.5 DEGREES REMARK 500 ARG A 56 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 56 NE - CZ - NH2 ANGL. DEV. = 4.2 DEGREES REMARK 500 GLU A 89 OE1 - CD - OE2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG A 91 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 GLU A 131 OE1 - CD - OE2 ANGL. DEV. = -7.7 DEGREES REMARK 500 ARG A 167 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 PHE A 174 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP A 204 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP A 204 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ARG B 18 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 GLU B 40 OE1 - CD - OE2 ANGL. DEV. = -12.0 DEGREES REMARK 500 ARG B 55 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 60 CD - NE - CZ ANGL. DEV. = 8.7 DEGREES REMARK 500 ARG B 60 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG B 60 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG B 80 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 80 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 GLU B 87 OE1 - CD - OE2 ANGL. DEV. = -7.3 DEGREES REMARK 500 LEU B 90 CB - CG - CD2 ANGL. DEV. = -13.2 DEGREES REMARK 500 ASP B 96 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 LYS B 115 CD - CE - NZ ANGL. DEV. = 22.5 DEGREES REMARK 500 TYR B 128 CB - CG - CD1 ANGL. DEV. = 4.2 DEGREES REMARK 500 TYR B 179 CB - CG - CD2 ANGL. DEV. = -4.5 DEGREES REMARK 500 LEU B 225 CB - CG - CD2 ANGL. DEV. = -11.0 DEGREES REMARK 500 ASP P 424 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 104 -54.58 -126.61 REMARK 500 ARG B 18 79.09 -117.02 REMARK 500 PHE B 104 -57.07 -127.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEZ A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEZ B 802 DBREF 2O02 A 1 230 UNP P63104 1433Z_HUMAN 1 230 DBREF 2O02 B 1 230 UNP P63104 1433Z_HUMAN 1 230 DBREF 2O02 P 417 430 PDB 2O02 2O02 417 430 DBREF 2O02 Q 417 430 PDB 2O02 2O02 417 430 SEQRES 1 A 230 MET ASP LYS ASN GLU LEU VAL GLN LYS ALA LYS LEU ALA SEQRES 2 A 230 GLU GLN ALA GLU ARG TYR ASP ASP MET ALA ALA CYS MET SEQRES 3 A 230 LYS SER VAL THR GLU GLN GLY ALA GLU LEU SER ASN GLU SEQRES 4 A 230 GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN VAL VAL SEQRES 5 A 230 GLY ALA ARG ARG SER SER TRP ARG VAL VAL SER SER ILE SEQRES 6 A 230 GLU GLN LYS THR GLU GLY ALA GLU LYS LYS GLN GLN MET SEQRES 7 A 230 ALA ARG GLU TYR ARG GLU LYS ILE GLU THR GLU LEU ARG SEQRES 8 A 230 ASP ILE CYS ASN ASP VAL LEU SER LEU LEU GLU LYS PHE SEQRES 9 A 230 LEU ILE PRO ASN ALA SER GLN ALA GLU SER LYS VAL PHE SEQRES 10 A 230 TYR LEU LYS MET LYS GLY ASP TYR TYR ARG TYR LEU ALA SEQRES 11 A 230 GLU VAL ALA ALA GLY ASP ASP LYS LYS GLY ILE VAL ASP SEQRES 12 A 230 GLN SER GLN GLN ALA TYR GLN GLU ALA PHE GLU ILE SER SEQRES 13 A 230 LYS LYS GLU MET GLN PRO THR HIS PRO ILE ARG LEU GLY SEQRES 14 A 230 LEU ALA LEU ASN PHE SER VAL PHE TYR TYR GLU ILE LEU SEQRES 15 A 230 ASN SER PRO GLU LYS ALA CYS SER LEU ALA LYS THR ALA SEQRES 16 A 230 PHE ASP GLU ALA ILE ALA GLU LEU ASP THR LEU SER GLU SEQRES 17 A 230 GLU SER TYR LYS ASP SER THR LEU ILE MET GLN LEU LEU SEQRES 18 A 230 ARG ASP ASN LEU THR LEU TRP THR SER SEQRES 1 B 230 MET ASP LYS ASN GLU LEU VAL GLN LYS ALA LYS LEU ALA SEQRES 2 B 230 GLU GLN ALA GLU ARG TYR ASP ASP MET ALA ALA CYS MET SEQRES 3 B 230 LYS SER VAL THR GLU GLN GLY ALA GLU LEU SER ASN GLU SEQRES 4 B 230 GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN VAL VAL SEQRES 5 B 230 GLY ALA ARG ARG SER SER TRP ARG VAL VAL SER SER ILE SEQRES 6 B 230 GLU GLN LYS THR GLU GLY ALA GLU LYS LYS GLN GLN MET SEQRES 7 B 230 ALA ARG GLU TYR ARG GLU LYS ILE GLU THR GLU LEU ARG SEQRES 8 B 230 ASP ILE CYS ASN ASP VAL LEU SER LEU LEU GLU LYS PHE SEQRES 9 B 230 LEU ILE PRO ASN ALA SER GLN ALA GLU SER LYS VAL PHE SEQRES 10 B 230 TYR LEU LYS MET LYS GLY ASP TYR TYR ARG TYR LEU ALA SEQRES 11 B 230 GLU VAL ALA ALA GLY ASP ASP LYS LYS GLY ILE VAL ASP SEQRES 12 B 230 GLN SER GLN GLN ALA TYR GLN GLU ALA PHE GLU ILE SER SEQRES 13 B 230 LYS LYS GLU MET GLN PRO THR HIS PRO ILE ARG LEU GLY SEQRES 14 B 230 LEU ALA LEU ASN PHE SER VAL PHE TYR TYR GLU ILE LEU SEQRES 15 B 230 ASN SER PRO GLU LYS ALA CYS SER LEU ALA LYS THR ALA SEQRES 16 B 230 PHE ASP GLU ALA ILE ALA GLU LEU ASP THR LEU SER GLU SEQRES 17 B 230 GLU SER TYR LYS ASP SER THR LEU ILE MET GLN LEU LEU SEQRES 18 B 230 ARG ASP ASN LEU THR LEU TRP THR SER SEQRES 1 P 14 GLY HIS GLY GLN GLY LEU LEU ASP ALA LEU ASP LEU ALA SEQRES 2 P 14 SER SEQRES 1 Q 14 GLY HIS GLY GLN GLY LEU LEU ASP ALA LEU ASP LEU ALA SEQRES 2 Q 14 SER HET BEZ A 801 9 HET BEZ B 802 9 HETNAM BEZ BENZOIC ACID FORMUL 5 BEZ 2(C7 H6 O2) FORMUL 7 HOH *721(H2 O) HELIX 1 1 ASP A 2 ALA A 16 1 15 HELIX 2 2 ARG A 18 GLN A 32 1 15 HELIX 3 3 SER A 37 LYS A 68 1 32 HELIX 4 4 LYS A 75 PHE A 104 1 30 HELIX 5 5 PHE A 104 ALA A 109 1 6 HELIX 6 6 GLN A 111 VAL A 132 1 22 HELIX 7 7 ALA A 134 MET A 160 1 27 HELIX 8 8 HIS A 164 ILE A 181 1 18 HELIX 9 9 SER A 184 ALA A 201 1 18 HELIX 10 10 GLU A 202 LEU A 206 5 5 HELIX 11 11 SER A 210 THR A 229 1 20 HELIX 12 12 ASP B 2 ALA B 16 1 15 HELIX 13 13 ARG B 18 GLY B 33 1 16 HELIX 14 14 SER B 37 THR B 69 1 33 HELIX 15 15 ALA B 72 PHE B 104 1 33 HELIX 16 16 GLN B 111 VAL B 132 1 22 HELIX 17 17 ASP B 137 MET B 160 1 24 HELIX 18 18 HIS B 164 ILE B 181 1 18 HELIX 19 19 SER B 184 ALA B 201 1 18 HELIX 20 20 GLU B 202 LEU B 206 5 5 HELIX 21 21 SER B 207 GLU B 209 5 3 HELIX 22 22 SER B 210 THR B 229 1 20 HELIX 23 23 GLY P 421 LEU P 426 1 6 HELIX 24 24 GLY Q 421 LEU Q 426 1 6 SITE 1 AC1 7 PHE A 196 MET A 218 GLN A 219 ARG A 222 SITE 2 AC1 7 PHE B 196 ARG B 222 BEZ B 802 SITE 1 AC2 6 PHE A 196 GLN A 219 ARG A 222 BEZ A 801 SITE 2 AC2 6 GLN B 219 ARG B 222 CRYST1 71.330 72.238 125.664 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014019 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013843 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007958 0.00000