PDB Short entry for 2O61 HEADER TRANSCRIPTION/DNA 06-DEC-06 2O61 TITLE CRYSTAL STRUCTURE OF NFKB, IRF7, IRF3 BOUND TO THE INTERFERON-B TITLE 2 ENHANCER CAVEAT 2O61 CHIRALITY ERROR AT C1' CENTER OF G35 CHAIN E. COMPND MOL_ID: 1; COMPND 2 MOLECULE: 36-MER; COMPND 3 CHAIN: E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 34-MER; COMPND 7 CHAIN: F; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: TRANSCRIPTION FACTOR P65/INTERFERON REGULATORY FACTOR COMPND 11 7/INTERFERON REGULATORY FACTOR 3 FUSION PROTEIN; COMPND 12 CHAIN: A; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT; COMPND 16 CHAIN: B; COMPND 17 FRAGMENT: RHR REGION; COMPND 18 SYNONYM: DNA-BINDING FACTOR KBF1, EBP-1; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 MOL_ID: 4; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: NFKB1; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-DNA COMPLEX, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.PANNE REVDAT 8 27-DEC-23 2O61 1 REMARK REVDAT 7 20-OCT-21 2O61 1 SEQADV REVDAT 6 18-OCT-17 2O61 1 REMARK REVDAT 5 02-AUG-17 2O61 1 SOURCE REVDAT 4 07-DEC-11 2O61 1 CAVEAT VERSN REVDAT 3 17-NOV-10 2O61 1 REMARK REVDAT 2 24-FEB-09 2O61 1 VERSN REVDAT 1 24-JUL-07 2O61 0 JRNL AUTH D.PANNE,T.MANIATIS,S.C.HARRISON JRNL TITL AN ATOMIC MODEL OF THE INTERFERON-BETA ENHANCEOSOME. JRNL REF CELL(CAMBRIDGE,MASS.) V. 129 1111 2007 JRNL REFN ISSN 0092-8674 JRNL PMID 17574024 JRNL DOI 10.1016/J.CELL.2007.05.019 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1165152.250 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 37592 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2254 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5801 REMARK 3 BIN R VALUE (WORKING SET) : 0.4560 REMARK 3 BIN FREE R VALUE : 0.5040 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 373 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.026 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6459 REMARK 3 NUCLEIC ACID ATOMS : 1428 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.98000 REMARK 3 B22 (A**2) : -1.42000 REMARK 3 B33 (A**2) : -8.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM SIGMAA (A) : 0.49 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.62 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.420 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GROUP REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.29 REMARK 3 BSOL : 29.85 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2O61 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000040731. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38201 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.10 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.50 REMARK 200 R MERGE FOR SHELL (I) : 0.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES, PH 7.0, 15% (W/V) PEG REMARK 280 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 47.61100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.11850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.18500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.11850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 47.61100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.18500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 CHAIN A REPRESENTS A PROTEIN MADE OF THREE DIFFERENT REMARK 400 PROTEINS FUSED TOGETHER. THE LINKERS ARE DISORDERED REMARK 400 IN THE STRUCTURE AND ARE LISTED IN SEQADV RECORDS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 18 REMARK 465 GLY A 292 REMARK 465 SER A 293 REMARK 465 LEU A 294 REMARK 465 SER A 295 REMARK 465 SER A 296 REMARK 465 GLY A 297 REMARK 465 SER A 298 REMARK 465 SER A 299 REMARK 465 LEU A 300 REMARK 465 SER A 301 REMARK 465 SER A 302 REMARK 465 PRO A 303 REMARK 465 SER A 304 REMARK 465 ALA A 305 REMARK 465 GLY A 306 REMARK 465 GLY A 1076 REMARK 465 GLY A 1077 REMARK 465 GLY A 1078 REMARK 465 SER A 1133 REMARK 465 LEU A 1134 REMARK 465 SER A 1135 REMARK 465 SER A 1136 REMARK 465 PRO A 1137 REMARK 465 SER A 1138 REMARK 465 ALA A 1139 REMARK 465 LEU A 1140 REMARK 465 SER A 1141 REMARK 465 PRO A 1142 REMARK 465 LYS A 1143 REMARK 465 PRO A 1144 REMARK 465 ARG A 1145 REMARK 465 ILE A 1146 REMARK 465 GLY A 2112 REMARK 465 LEU A 2113 REMARK 465 GLU A 2114 REMARK 465 HIS A 2115 REMARK 465 HIS A 2116 REMARK 465 HIS A 2117 REMARK 465 HIS A 2118 REMARK 465 HIS A 2119 REMARK 465 HIS A 2120 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1035 CG CD OE1 OE2 REMARK 470 SER A1132 OG REMARK 470 LYS A2039 CG CD CE NZ REMARK 470 GLU A2049 CG CD OE1 OE2 REMARK 470 ASP A2050 CG OD1 OD2 REMARK 470 VAL A2110 CG1 CG2 REMARK 470 ASN A2111 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O6 DG E 11 NH2 ARG A 2086 1.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG E 35 N9 - C1' - C2' ANGL. DEV. = 10.5 DEGREES REMARK 500 DG E 35 O4' - C1' - N9 ANGL. DEV. = 3.3 DEGREES REMARK 500 PRO A 81 C - N - CA ANGL. DEV. = 11.1 DEGREES REMARK 500 PRO A 82 C - N - CA ANGL. DEV. = -9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 41 -166.06 43.12 REMARK 500 GLU A 49 -52.20 -24.59 REMARK 500 TYR A 66 140.16 -178.57 REMARK 500 PRO A 81 -62.38 -10.20 REMARK 500 HIS A 83 65.92 -62.68 REMARK 500 GLN A 142 44.10 33.22 REMARK 500 ILE A 145 -16.24 -39.47 REMARK 500 GLU A 146 -74.28 -73.31 REMARK 500 ASP A 151 152.80 -42.56 REMARK 500 VAL A 165 -142.64 -85.61 REMARK 500 PRO A 168 100.74 -32.68 REMARK 500 SER A 169 113.60 44.70 REMARK 500 ARG A 171 152.65 -31.03 REMARK 500 ASN A 190 54.49 -104.75 REMARK 500 THR A 191 4.70 174.19 REMARK 500 LYS A 218 119.96 -39.81 REMARK 500 LYS A 221 -14.06 -47.29 REMARK 500 ASP A 223 73.86 -158.18 REMARK 500 ILE A 224 143.25 -173.71 REMARK 500 PRO A 231 91.06 -53.54 REMARK 500 ARG A 246 39.97 33.04 REMARK 500 GLN A 247 -2.03 66.89 REMARK 500 PRO A 260 34.07 -73.13 REMARK 500 SER A 261 77.90 -157.67 REMARK 500 ARG A 278 -4.02 69.91 REMARK 500 PRO A 290 154.75 -47.03 REMARK 500 ARG A1037 64.58 67.57 REMARK 500 PRO A1072 -152.93 -65.63 REMARK 500 SER A1074 -102.06 -17.02 REMARK 500 GLU A1082 6.14 -68.01 REMARK 500 ALA A1083 28.12 -74.92 REMARK 500 ASN A1111 31.26 -91.02 REMARK 500 ASP A1114 95.98 -31.60 REMARK 500 SER A1127 -18.52 -174.61 REMARK 500 LEU A1128 47.18 171.36 REMARK 500 SER A1129 99.66 -69.14 REMARK 500 ASP A1131 102.30 -48.55 REMARK 500 GLN A2020 -75.30 -45.37 REMARK 500 ALA A2025 -152.42 174.32 REMARK 500 LYS A2029 48.99 -83.46 REMARK 500 ARG A2031 98.79 58.93 REMARK 500 THR A2032 -36.24 165.02 REMARK 500 TRP A2038 48.17 -178.48 REMARK 500 PHE A2051 37.94 -95.98 REMARK 500 ARG A2068 65.15 -108.42 REMARK 500 ASP A2069 118.65 -178.30 REMARK 500 ASN A2085 -85.16 -50.85 REMARK 500 GLU A2088 97.11 13.94 REMARK 500 LEU A2090 140.89 178.93 REMARK 500 ALA A2093 -92.36 -128.23 REMARK 500 REMARK 500 THIS ENTRY HAS 85 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O6G RELATED DB: PDB DBREF 2O61 A 20 291 UNP Q04206 TF65_HUMAN 20 291 DBREF 2O61 A 1008 1125 UNP Q92985 IRF7_HUMAN 8 125 DBREF 2O61 A 2009 2111 UNP Q14653 IRF3_HUMAN 9 111 DBREF 2O61 B 38 350 UNP P19838 NFKB1_HUMAN 40 352 DBREF 2O61 E 1 36 PDB 2O61 2O61 1 36 DBREF 2O61 F 2 35 PDB 2O61 2O61 2 35 SEQADV 2O61 MET A 18 UNP Q04206 INITIATING METHIONINE SEQADV 2O61 GLY A 19 UNP Q04206 CLONING ARTIFACT SEQADV 2O61 GLY A 292 UNP Q04206 LINKER SEQADV 2O61 SER A 293 UNP Q04206 LINKER SEQADV 2O61 LEU A 294 UNP Q04206 LINKER SEQADV 2O61 SER A 295 UNP Q04206 LINKER SEQADV 2O61 SER A 296 UNP Q04206 LINKER SEQADV 2O61 GLY A 297 UNP Q04206 LINKER SEQADV 2O61 SER A 298 UNP Q04206 LINKER SEQADV 2O61 SER A 299 UNP Q04206 LINKER SEQADV 2O61 LEU A 300 UNP Q04206 LINKER SEQADV 2O61 SER A 301 UNP Q04206 LINKER SEQADV 2O61 SER A 302 UNP Q04206 LINKER SEQADV 2O61 PRO A 303 UNP Q04206 LINKER SEQADV 2O61 SER A 304 UNP Q04206 LINKER SEQADV 2O61 ALA A 305 UNP Q04206 LINKER SEQADV 2O61 GLY A 306 UNP Q04206 LINKER SEQADV 2O61 GLN A 1118 UNP Q92985 PRO 404 ENGINEERED MUTATION SEQADV 2O61 GLY A 1126 UNP Q92985 LINKER SEQADV 2O61 SER A 1127 UNP Q92985 LINKER SEQADV 2O61 LEU A 1128 UNP Q92985 LINKER SEQADV 2O61 SER A 1129 UNP Q92985 LINKER SEQADV 2O61 SER A 1130 UNP Q92985 LINKER SEQADV 2O61 ASP A 1131 UNP Q92985 LINKER SEQADV 2O61 SER A 1132 UNP Q92985 LINKER SEQADV 2O61 SER A 1133 UNP Q92985 LINKER SEQADV 2O61 LEU A 1134 UNP Q92985 LINKER SEQADV 2O61 SER A 1135 UNP Q92985 LINKER SEQADV 2O61 SER A 1136 UNP Q92985 LINKER SEQADV 2O61 PRO A 1137 UNP Q92985 LINKER SEQADV 2O61 SER A 1138 UNP Q92985 LINKER SEQADV 2O61 ALA A 1139 UNP Q92985 LINKER SEQADV 2O61 LEU A 1140 UNP Q92985 LINKER SEQADV 2O61 SER A 1141 UNP Q92985 LINKER SEQADV 2O61 PRO A 1142 UNP Q92985 LINKER SEQADV 2O61 LYS A 1143 UNP Q92985 LINKER SEQADV 2O61 PRO A 1144 UNP Q92985 LINKER SEQADV 2O61 ARG A 1145 UNP Q92985 LINKER SEQADV 2O61 ILE A 1146 UNP Q92985 LINKER SEQADV 2O61 GLY A 2112 UNP Q14653 EXPRESSION TAG SEQADV 2O61 LEU A 2113 UNP Q14653 EXPRESSION TAG SEQADV 2O61 GLU A 2114 UNP Q14653 EXPRESSION TAG SEQADV 2O61 HIS A 2115 UNP Q14653 EXPRESSION TAG SEQADV 2O61 HIS A 2116 UNP Q14653 EXPRESSION TAG SEQADV 2O61 HIS A 2117 UNP Q14653 EXPRESSION TAG SEQADV 2O61 HIS A 2118 UNP Q14653 EXPRESSION TAG SEQADV 2O61 HIS A 2119 UNP Q14653 EXPRESSION TAG SEQADV 2O61 HIS A 2120 UNP Q14653 EXPRESSION TAG SEQADV 2O61 MET B 37 UNP P19838 INITIATING METHIONINE SEQRES 1 E 36 DT DT DG DA DA DA DG DG DG DA DG DA DA SEQRES 2 E 36 DG DT DG DA DA DA DG DT DG DG DG DA DA SEQRES 3 E 36 DA DT DT DC DC DT DC DT DG DT SEQRES 1 F 34 DC DA DG DA DG DG DA DA DT DT DT DC DC SEQRES 2 F 34 DC DA DC DT DT DT DC DA DC DT DT DC DT SEQRES 3 F 34 DC DC DC DT DT DT DC DA SEQRES 1 A 540 MET GLY TYR VAL GLU ILE ILE GLU GLN PRO LYS GLN ARG SEQRES 2 A 540 GLY MET ARG PHE ARG TYR LYS CYS GLU GLY ARG SER ALA SEQRES 3 A 540 GLY SER ILE PRO GLY GLU ARG SER THR ASP THR THR LYS SEQRES 4 A 540 THR HIS PRO THR ILE LYS ILE ASN GLY TYR THR GLY PRO SEQRES 5 A 540 GLY THR VAL ARG ILE SER LEU VAL THR LYS ASP PRO PRO SEQRES 6 A 540 HIS ARG PRO HIS PRO HIS GLU LEU VAL GLY LYS ASP CYS SEQRES 7 A 540 ARG ASP GLY PHE TYR GLU ALA GLU LEU CYS PRO ASP ARG SEQRES 8 A 540 CYS ILE HIS SER PHE GLN ASN LEU GLY ILE GLN CYS VAL SEQRES 9 A 540 LYS LYS ARG ASP LEU GLU GLN ALA ILE SER GLN ARG ILE SEQRES 10 A 540 GLN THR ASN ASN ASN PRO PHE GLN VAL PRO ILE GLU GLU SEQRES 11 A 540 GLN ARG GLY ASP TYR ASP LEU ASN ALA VAL ARG LEU CYS SEQRES 12 A 540 PHE GLN VAL THR VAL ARG ASP PRO SER GLY ARG PRO LEU SEQRES 13 A 540 ARG LEU PRO PRO VAL LEU SER HIS PRO ILE PHE ASP ASN SEQRES 14 A 540 ARG ALA PRO ASN THR ALA GLU LEU LYS ILE CYS ARG VAL SEQRES 15 A 540 ASN ARG ASN SER GLY SER CYS LEU GLY GLY ASP GLU ILE SEQRES 16 A 540 PHE LEU LEU CYS ASP LYS VAL GLN LYS GLU ASP ILE GLU SEQRES 17 A 540 VAL TYR PHE THR GLY PRO GLY TRP GLU ALA ARG GLY SER SEQRES 18 A 540 PHE SER GLN ALA ASP VAL HIS ARG GLN VAL ALA ILE VAL SEQRES 19 A 540 PHE ARG THR PRO PRO TYR ALA ASP PRO SER LEU GLN ALA SEQRES 20 A 540 PRO VAL ARG VAL SER MET GLN LEU ARG ARG PRO SER ASP SEQRES 21 A 540 ARG GLU LEU SER GLU PRO MET GLU PHE GLN TYR LEU PRO SEQRES 22 A 540 ASP GLY SER LEU SER SER GLY SER SER LEU SER SER PRO SEQRES 23 A 540 SER ALA GLY ALA ALA PRO ARG VAL LEU PHE GLY GLU TRP SEQRES 24 A 540 LEU LEU GLY GLU ILE SER SER GLY CYS TYR GLU GLY LEU SEQRES 25 A 540 GLN TRP LEU ASP GLU ALA ARG THR CYS PHE ARG VAL PRO SEQRES 26 A 540 TRP LYS HIS PHE ALA ARG LYS ASP LEU SER GLU ALA ASP SEQRES 27 A 540 ALA ARG ILE PHE LYS ALA TRP ALA VAL ALA ARG GLY ARG SEQRES 28 A 540 TRP PRO PRO SER SER ARG GLY GLY GLY PRO PRO PRO GLU SEQRES 29 A 540 ALA GLU THR ALA GLU ARG ALA GLY TRP LYS THR ASN PHE SEQRES 30 A 540 ARG CYS ALA LEU ARG SER THR ARG ARG PHE VAL MET LEU SEQRES 31 A 540 ARG ASP ASN SER GLY ASP PRO ALA ASP GLN HIS LYS VAL SEQRES 32 A 540 TYR ALA LEU SER GLY SER LEU SER SER ASP SER SER LEU SEQRES 33 A 540 SER SER PRO SER ALA LEU SER PRO LYS PRO ARG ILE LEU SEQRES 34 A 540 PRO TRP LEU VAL SER GLN LEU ASP LEU GLY GLN LEU GLU SEQRES 35 A 540 GLY VAL ALA TRP VAL ASN LYS SER ARG THR ARG PHE ARG SEQRES 36 A 540 ILE PRO TRP LYS HIS GLY LEU ARG GLN ASP ALA GLN GLN SEQRES 37 A 540 GLU ASP PHE GLY ILE PHE GLN ALA TRP ALA GLU ALA THR SEQRES 38 A 540 GLY ALA TYR VAL PRO GLY ARG ASP LYS PRO ASP LEU PRO SEQRES 39 A 540 THR TRP LYS ARG ASN PHE ARG SER ALA LEU ASN ARG LYS SEQRES 40 A 540 GLU GLY LEU ARG LEU ALA GLU ASP ARG SER LYS ASP PRO SEQRES 41 A 540 HIS ASP PRO HIS LYS ILE TYR GLU PHE VAL ASN GLY LEU SEQRES 42 A 540 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 314 MET ASP GLY PRO TYR LEU GLN ILE LEU GLU GLN PRO LYS SEQRES 2 B 314 GLN ARG GLY PHE ARG PHE ARG TYR VAL CYS GLU GLY PRO SEQRES 3 B 314 SER HIS GLY GLY LEU PRO GLY ALA SER SER GLU LYS ASN SEQRES 4 B 314 LYS LYS SER TYR PRO GLN VAL LYS ILE CYS ASN TYR VAL SEQRES 5 B 314 GLY PRO ALA LYS VAL ILE VAL GLN LEU VAL THR ASN GLY SEQRES 6 B 314 LYS ASN ILE HIS LEU HIS ALA HIS SER LEU VAL GLY LYS SEQRES 7 B 314 HIS CYS GLU ASP GLY ILE CYS THR VAL THR ALA GLY PRO SEQRES 8 B 314 LYS ASP MET VAL VAL GLY PHE ALA ASN LEU GLY ILE LEU SEQRES 9 B 314 HIS VAL THR LYS LYS LYS VAL PHE GLU THR LEU GLU ALA SEQRES 10 B 314 ARG MET THR GLU ALA CYS ILE ARG GLY TYR ASN PRO GLY SEQRES 11 B 314 LEU LEU VAL HIS PRO ASP LEU ALA TYR LEU GLN ALA GLU SEQRES 12 B 314 GLY GLY GLY ASP ARG GLN LEU GLY ASP ARG GLU LYS GLU SEQRES 13 B 314 LEU ILE ARG GLN ALA ALA LEU GLN GLN THR LYS GLU MET SEQRES 14 B 314 ASP LEU SER VAL VAL ARG LEU MET PHE THR ALA PHE LEU SEQRES 15 B 314 PRO ASP SER THR GLY SER PHE THR ARG ARG LEU GLU PRO SEQRES 16 B 314 VAL VAL SER ASP ALA ILE TYR ASP SER LYS ALA PRO ASN SEQRES 17 B 314 ALA SER ASN LEU LYS ILE VAL ARG MET ASP ARG THR ALA SEQRES 18 B 314 GLY CYS VAL THR GLY GLY GLU GLU ILE TYR LEU LEU CYS SEQRES 19 B 314 ASP LYS VAL GLN LYS ASP ASP ILE GLN ILE ARG PHE TYR SEQRES 20 B 314 GLU GLU GLU GLU ASN GLY GLY VAL TRP GLU GLY PHE GLY SEQRES 21 B 314 ASP PHE SER PRO THR ASP VAL HIS ARG GLN PHE ALA ILE SEQRES 22 B 314 VAL PHE LYS THR PRO LYS TYR LYS ASP ILE ASN ILE THR SEQRES 23 B 314 LYS PRO ALA SER VAL PHE VAL GLN LEU ARG ARG LYS SER SEQRES 24 B 314 ASP LEU GLU THR SER GLU PRO LYS PRO PHE LEU TYR TYR SEQRES 25 B 314 PRO GLU FORMUL 5 HOH *25(H2 O) HELIX 1 1 LYS A 122 ARG A 124 5 3 HELIX 2 2 ASP A 125 THR A 136 1 12 HELIX 3 3 SER A 240 ALA A 242 5 3 HELIX 4 4 ARG A 274 ARG A 278 5 5 HELIX 5 5 LEU A 1013 GLY A 1025 1 13 HELIX 6 6 GLU A 1054 ASP A 1056 5 3 HELIX 7 7 ALA A 1057 ARG A 1067 1 11 HELIX 8 8 ALA A 1083 ARG A 1103 1 21 HELIX 9 9 LEU A 2009 GLY A 2019 1 11 HELIX 10 10 GLN A 2048 ASP A 2050 5 3 HELIX 11 11 PHE A 2051 ALA A 2060 1 10 HELIX 12 12 ASP A 2072 ASN A 2085 1 14 HELIX 13 13 TYR B 57 GLY B 61 5 5 HELIX 14 14 LYS B 146 ARG B 161 1 16 HELIX 15 15 GLY B 187 MET B 205 1 19 HELIX 16 16 GLN B 274 ASP B 276 5 3 HELIX 17 17 SER B 299 THR B 301 5 3 SHEET 1 A 3 TYR A 20 GLU A 25 0 SHEET 2 A 3 THR A 60 ASN A 64 -1 O THR A 60 N ILE A 24 SHEET 3 A 3 ILE A 110 SER A 112 -1 O HIS A 111 N ILE A 61 SHEET 1 B 3 ARG A 35 TYR A 36 0 SHEET 2 B 3 GLY A 117 CYS A 120 1 O CYS A 120 N ARG A 35 SHEET 3 B 3 GLU A 89 VAL A 91 -1 N GLU A 89 O GLN A 119 SHEET 1 C 5 CYS A 95 ARG A 96 0 SHEET 2 C 5 PHE A 99 GLU A 103 -1 O PHE A 99 N ARG A 96 SHEET 3 C 5 THR A 71 VAL A 77 -1 N ILE A 74 O TYR A 100 SHEET 4 C 5 ALA A 156 ARG A 166 -1 O GLN A 162 N ARG A 73 SHEET 5 C 5 VAL A 178 LEU A 179 -1 O VAL A 178 N PHE A 161 SHEET 1 D 3 PRO A 172 ARG A 174 0 SHEET 2 D 3 ALA A 156 ARG A 166 -1 N VAL A 165 O LEU A 173 SHEET 3 D 3 ILE A 183 PHE A 184 -1 O ILE A 183 N VAL A 157 SHEET 1 E 4 ILE A 196 VAL A 199 0 SHEET 2 E 4 GLU A 211 CYS A 216 -1 O LEU A 215 N CYS A 197 SHEET 3 E 4 ALA A 249 ARG A 253 -1 O ILE A 250 N LEU A 214 SHEET 4 E 4 VAL A 244 HIS A 245 -1 N HIS A 245 O ALA A 249 SHEET 1 F 5 SER A 203 SER A 205 0 SHEET 2 F 5 MET A 284 LEU A 289 1 O LEU A 289 N GLY A 204 SHEET 3 F 5 VAL A 266 ARG A 273 -1 N VAL A 268 O PHE A 286 SHEET 4 F 5 GLU A 225 GLY A 230 -1 N TYR A 227 O GLN A 271 SHEET 5 F 5 TRP A 233 ARG A 236 -1 O ALA A 235 N PHE A 228 SHEET 1 G 4 GLN A1031 TRP A1032 0 SHEET 2 G 4 CYS A1039 PRO A1043 -1 O ARG A1041 N GLN A1031 SHEET 3 G 4 HIS A1119 LEU A1124 -1 O TYR A1122 N PHE A1040 SHEET 4 G 4 PHE A1105 ASN A1111 -1 N ARG A1109 O VAL A1121 SHEET 1 H 4 ALA A2025 TRP A2026 0 SHEET 2 H 4 PHE A2034 PRO A2037 -1 O ARG A2035 N ALA A2025 SHEET 3 H 4 HIS A2104 PHE A2109 -1 O LYS A2105 N ILE A2036 SHEET 4 H 4 LEU A2090 ARG A2096 -1 N ARG A2091 O GLU A2108 SHEET 1 I 3 TYR B 41 ILE B 44 0 SHEET 2 I 3 GLN B 81 CYS B 85 -1 O LYS B 83 N GLN B 43 SHEET 3 I 3 VAL B 131 GLY B 133 -1 O VAL B 132 N VAL B 82 SHEET 1 J 5 CYS B 116 GLU B 117 0 SHEET 2 J 5 ILE B 120 ALA B 125 -1 O ILE B 120 N GLU B 117 SHEET 3 J 5 ALA B 91 VAL B 98 -1 N VAL B 93 O VAL B 123 SHEET 4 J 5 VAL B 209 THR B 215 -1 O ARG B 211 N VAL B 98 SHEET 5 J 5 VAL B 232 TYR B 238 -1 O ILE B 237 N VAL B 210 SHEET 1 K 2 SER B 110 GLY B 113 0 SHEET 2 K 2 LEU B 137 LEU B 140 -1 O LEU B 140 N SER B 110 SHEET 1 L 2 PHE B 217 LEU B 218 0 SHEET 2 L 2 ARG B 227 ARG B 228 -1 O ARG B 227 N LEU B 218 SHEET 1 M 4 ILE B 250 MET B 253 0 SHEET 2 M 4 GLU B 265 CYS B 270 -1 O LEU B 269 N ARG B 252 SHEET 3 M 4 ALA B 308 LYS B 312 -1 O PHE B 311 N ILE B 266 SHEET 4 M 4 VAL B 303 HIS B 304 -1 N HIS B 304 O ALA B 308 SHEET 1 N 5 ALA B 257 CYS B 259 0 SHEET 2 N 5 LYS B 343 TYR B 348 1 O TYR B 348 N GLY B 258 SHEET 3 N 5 ALA B 325 ARG B 333 -1 N VAL B 327 O PHE B 345 SHEET 4 N 5 ILE B 278 GLU B 286 -1 N ARG B 281 O GLN B 330 SHEET 5 N 5 GLY B 290 PHE B 295 -1 O GLY B 294 N PHE B 282 CISPEP 1 PRO A 1079 PRO A 1080 0 0.04 CRYST1 95.222 116.370 134.237 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010472 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008593 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007420 0.00000