PDB Short entry for 2O96 HEADER UNKNOWN FUNCTION 13-DEC-06 2O96 TITLE CRYSTAL STRUCTURE OF THE METAL-FREE DIMERIC HUMAN MOV34 MPN DOMAIN TITLE 2 (RESIDUES 1-177) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: MPN DOMAIN, N-TERMINUS DOMAIN, RESIDUES 1-177; COMPND 5 SYNONYM: 26S PROTEASOME REGULATORY SUBUNIT RPN8, 26S PROTEASOME COMPND 6 REGULATORY SUBUNIT S12, PROTEASOME SUBUNIT P40, MOV34 PROTEIN COMPND 7 HOMOLOG; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PSMD7, MOV34L; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)SLYD-; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A-TEV KEYWDS PSMD7, 26S PROTEASOME SUBUNIT, MOV34, JAB1/MPN, METAL-FREE DIMER, KEYWDS 2 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.SANCHES,B.S.C.ALVES,N.I.T.ZANCHIN,B.G.GUIMARAES REVDAT 4 25-OCT-23 2O96 1 SEQADV REVDAT 3 13-JUL-11 2O96 1 VERSN REVDAT 2 24-FEB-09 2O96 1 VERSN REVDAT 1 17-JUL-07 2O96 0 JRNL AUTH M.SANCHES,B.S.C.ALVES,N.I.T.ZANCHIN,B.G.GUIMARAES JRNL TITL THE CRYSTAL STRUCTURE OF THE HUMAN MOV34 MPN DOMAIN REVEALS JRNL TITL 2 A METAL-FREE DIMER JRNL REF J.MOL.BIOL. V. 370 846 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17559875 JRNL DOI 10.1016/J.JMB.2007.04.084 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.S.C.ALVES,S.OYAMA JR.,F.C.GOZZO,M.SANCHES,B.G.GUIMARAES, REMARK 1 AUTH 2 N.I.T.ZANCHIN REMARK 1 TITL CHARACTERIZATION OF THE HUMAN ORTHOLOG OF MOV34 REVEALS REMARK 1 TITL 2 EIGHT N-TERMINAL RESIDUES IMPORTANT FOR MPN DOMAIN STABILITY REMARK 1 REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 347 608 2006 REMARK 1 REFN ISSN 0006-291X REMARK 1 PMID 16842755 REMARK 1 DOI 10.1016/J.BBRC.2006.06.133 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 10068 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 509 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 737 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.4370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2557 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 76.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.45000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.27000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.408 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.256 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 29.805 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.920 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.874 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2613 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3536 ; 1.590 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 313 ; 7.172 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;36.657 ;25.041 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 463 ;20.471 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;23.809 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 398 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1934 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1307 ; 0.267 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1776 ; 0.328 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 110 ; 0.180 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 58 ; 0.258 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.019 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1621 ; 1.432 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2584 ; 2.543 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1115 ; 1.914 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 952 ; 3.175 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 2 A 167 1 REMARK 3 1 B 2 B 167 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1268 ; 0.040 ; 0.050 REMARK 3 TIGHT THERMAL 1 A (A**2): 1268 ; 0.060 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 24 REMARK 3 ORIGIN FOR THE GROUP (A): 24.8466 11.4180 -2.9856 REMARK 3 T TENSOR REMARK 3 T11: 0.1235 T22: 0.2892 REMARK 3 T33: 0.2814 T12: -0.1104 REMARK 3 T13: -0.0167 T23: -0.0191 REMARK 3 L TENSOR REMARK 3 L11: 4.3955 L22: 2.3629 REMARK 3 L33: 6.1732 L12: 3.1062 REMARK 3 L13: 0.2986 L23: -0.8051 REMARK 3 S TENSOR REMARK 3 S11: 0.2155 S12: -0.6812 S13: -0.1614 REMARK 3 S21: 0.8301 S22: -0.0005 S23: -0.3306 REMARK 3 S31: 0.6299 S32: 0.5017 S33: -0.2150 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 33 REMARK 3 ORIGIN FOR THE GROUP (A): 29.5366 0.6249 -20.3625 REMARK 3 T TENSOR REMARK 3 T11: 1.0456 T22: 0.6848 REMARK 3 T33: 0.5710 T12: 0.4120 REMARK 3 T13: 0.1629 T23: -0.1093 REMARK 3 L TENSOR REMARK 3 L11: 5.3931 L22: 138.5937 REMARK 3 L33: 3.4322 L12: 2.6255 REMARK 3 L13: -0.3536 L23: -21.8078 REMARK 3 S TENSOR REMARK 3 S11: 2.7220 S12: 0.2789 S13: 0.4403 REMARK 3 S21: -6.6948 S22: -2.2007 S23: 2.6023 REMARK 3 S31: -0.5546 S32: 1.1292 S33: -0.5213 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 34 A 69 REMARK 3 ORIGIN FOR THE GROUP (A): 19.6816 13.1668 -11.9200 REMARK 3 T TENSOR REMARK 3 T11: 0.2689 T22: 0.2690 REMARK 3 T33: 0.3009 T12: -0.0082 REMARK 3 T13: 0.0365 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: 2.6587 L22: 0.7506 REMARK 3 L33: 9.9952 L12: 1.0908 REMARK 3 L13: -0.2486 L23: -0.7919 REMARK 3 S TENSOR REMARK 3 S11: 0.2251 S12: -0.0371 S13: -0.0901 REMARK 3 S21: 0.0358 S22: 0.0600 S23: -0.0237 REMARK 3 S31: -0.0496 S32: -0.1245 S33: -0.2851 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 70 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): 16.2411 12.8589 -10.3717 REMARK 3 T TENSOR REMARK 3 T11: 0.3292 T22: 0.3168 REMARK 3 T33: 0.2592 T12: 0.0011 REMARK 3 T13: -0.0013 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 4.0362 L22: 3.8112 REMARK 3 L33: 0.9085 L12: 1.6035 REMARK 3 L13: -0.4528 L23: -0.7559 REMARK 3 S TENSOR REMARK 3 S11: -0.0412 S12: 0.0699 S13: 0.0902 REMARK 3 S21: 0.1820 S22: 0.0820 S23: -0.0044 REMARK 3 S31: -0.1517 S32: 0.0640 S33: -0.0408 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 126 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): 38.6048 7.8647 -10.2204 REMARK 3 T TENSOR REMARK 3 T11: 0.3130 T22: 0.3532 REMARK 3 T33: 1.3855 T12: 0.0777 REMARK 3 T13: 0.0689 T23: -0.1039 REMARK 3 L TENSOR REMARK 3 L11: 187.0490 L22: 1.3644 REMARK 3 L33: 83.2512 L12: 14.5889 REMARK 3 L13: 72.3636 L23: 9.1822 REMARK 3 S TENSOR REMARK 3 S11: 2.0783 S12: -2.6723 S13: -4.1861 REMARK 3 S21: -0.9256 S22: -1.7472 S23: 4.5244 REMARK 3 S31: -2.3338 S32: 2.8992 S33: -0.3311 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 133 A 167 REMARK 3 ORIGIN FOR THE GROUP (A): 25.1830 20.8039 -4.4109 REMARK 3 T TENSOR REMARK 3 T11: 0.1906 T22: 0.3072 REMARK 3 T33: 0.2592 T12: -0.1304 REMARK 3 T13: -0.0512 T23: -0.1131 REMARK 3 L TENSOR REMARK 3 L11: 9.0325 L22: 11.7061 REMARK 3 L33: 11.1012 L12: -6.5576 REMARK 3 L13: 4.4422 L23: -6.5022 REMARK 3 S TENSOR REMARK 3 S11: 0.1954 S12: -0.4093 S13: 0.3197 REMARK 3 S21: -0.1710 S22: 0.0144 S23: -0.0188 REMARK 3 S31: -0.2126 S32: 0.4028 S33: -0.2098 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 24 REMARK 3 ORIGIN FOR THE GROUP (A): 24.6430 -13.2193 -2.4646 REMARK 3 T TENSOR REMARK 3 T11: 0.1721 T22: 0.3146 REMARK 3 T33: 0.1341 T12: 0.0412 REMARK 3 T13: -0.0948 T23: 0.0591 REMARK 3 L TENSOR REMARK 3 L11: 6.5280 L22: 4.1236 REMARK 3 L33: 3.5957 L12: 0.8442 REMARK 3 L13: -0.4710 L23: -3.8422 REMARK 3 S TENSOR REMARK 3 S11: 0.1113 S12: -0.0382 S13: 0.5824 REMARK 3 S21: -0.4242 S22: -0.1110 S23: -0.5573 REMARK 3 S31: -0.2406 S32: 0.7171 S33: -0.0003 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 25 B 33 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7016 -1.4484 9.6623 REMARK 3 T TENSOR REMARK 3 T11: 0.9613 T22: 0.6752 REMARK 3 T33: 1.9695 T12: -0.2802 REMARK 3 T13: 0.5933 T23: -0.1092 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: -0.1380 S12: -0.4032 S13: 4.2856 REMARK 3 S21: 1.8870 S22: 0.2539 S23: 2.6193 REMARK 3 S31: 1.9596 S32: 0.6085 S33: -0.1159 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 34 B 69 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0447 -13.9922 -2.9474 REMARK 3 T TENSOR REMARK 3 T11: 0.3142 T22: 0.2681 REMARK 3 T33: 0.2209 T12: 0.0155 REMARK 3 T13: -0.0140 T23: -0.0309 REMARK 3 L TENSOR REMARK 3 L11: 6.1505 L22: 1.3061 REMARK 3 L33: 2.5911 L12: -0.1761 REMARK 3 L13: -0.8158 L23: -1.5008 REMARK 3 S TENSOR REMARK 3 S11: -0.0491 S12: 0.0710 S13: 0.3959 REMARK 3 S21: 0.0360 S22: 0.0986 S23: -0.0515 REMARK 3 S31: 0.0444 S32: -0.1292 S33: -0.0494 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 70 B 124 REMARK 3 ORIGIN FOR THE GROUP (A): 13.7959 -13.7333 -7.0132 REMARK 3 T TENSOR REMARK 3 T11: 0.2787 T22: 0.3047 REMARK 3 T33: 0.3276 T12: 0.0342 REMARK 3 T13: 0.0262 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 1.7464 L22: 3.4002 REMARK 3 L33: 3.5248 L12: 0.0781 REMARK 3 L13: 1.6881 L23: -1.1500 REMARK 3 S TENSOR REMARK 3 S11: -0.0836 S12: -0.0103 S13: -0.1321 REMARK 3 S21: -0.1683 S22: 0.1458 S23: -0.1263 REMARK 3 S31: 0.0815 S32: -0.0789 S33: -0.0622 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 125 B 158 REMARK 3 ORIGIN FOR THE GROUP (A): 20.2708 -22.1590 2.7526 REMARK 3 T TENSOR REMARK 3 T11: 0.3115 T22: 0.3412 REMARK 3 T33: 0.2714 T12: 0.0735 REMARK 3 T13: -0.0300 T23: 0.0813 REMARK 3 L TENSOR REMARK 3 L11: 4.0964 L22: 12.9539 REMARK 3 L33: 6.9792 L12: -2.2343 REMARK 3 L13: 0.6709 L23: 3.1500 REMARK 3 S TENSOR REMARK 3 S11: 0.2373 S12: -0.6467 S13: -0.3377 REMARK 3 S21: 1.1132 S22: 0.2805 S23: -0.2172 REMARK 3 S31: 0.9158 S32: 0.4530 S33: -0.5178 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 159 B 168 REMARK 3 ORIGIN FOR THE GROUP (A): 34.1675 -8.3819 -2.9313 REMARK 3 T TENSOR REMARK 3 T11: 0.3944 T22: 0.7405 REMARK 3 T33: 0.5792 T12: 0.0343 REMARK 3 T13: -0.0614 T23: -0.0376 REMARK 3 L TENSOR REMARK 3 L11: 1.5486 L22: 13.5567 REMARK 3 L33: 8.2626 L12: 4.3559 REMARK 3 L13: 0.2587 L23: 4.0019 REMARK 3 S TENSOR REMARK 3 S11: -0.3136 S12: 0.1597 S13: -0.4425 REMARK 3 S21: -0.3502 S22: 0.7498 S23: -3.1248 REMARK 3 S31: -1.6531 S32: 0.0783 S33: -0.4362 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O96 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040844. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : D03B-MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.427 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10578 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 68.278 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : 0.08800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.56200 REMARK 200 R SYM FOR SHELL (I) : 0.56200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2O95 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRATE, 0,2M NH4OAC, 30% PEG REMARK 280 4000, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.35050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.00500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.35050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 48.00500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER IN THE ASYMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 LEU A 131 REMARK 465 GLY A 132 REMARK 465 VAL A 144 REMARK 465 HIS A 145 REMARK 465 ASP A 146 REMARK 465 ASP A 147 REMARK 465 GLY A 148 REMARK 465 THR A 149 REMARK 465 GLU A 168 REMARK 465 GLU A 169 REMARK 465 VAL A 170 REMARK 465 GLY A 171 REMARK 465 VAL A 172 REMARK 465 GLU A 173 REMARK 465 HIS A 174 REMARK 465 LEU A 175 REMARK 465 LEU A 176 REMARK 465 ARG A 177 REMARK 465 GLY B 0 REMARK 465 LEU B 131 REMARK 465 VAL B 144 REMARK 465 HIS B 145 REMARK 465 ASP B 146 REMARK 465 ASP B 147 REMARK 465 GLY B 148 REMARK 465 THR B 149 REMARK 465 GLU B 169 REMARK 465 VAL B 170 REMARK 465 GLY B 171 REMARK 465 VAL B 172 REMARK 465 GLU B 173 REMARK 465 HIS B 174 REMARK 465 LEU B 175 REMARK 465 LEU B 176 REMARK 465 ARG B 177 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 44 O VAL A 47 2.14 REMARK 500 OE1 GLN B 44 O VAL B 47 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 22 -36.11 -38.51 REMARK 500 VAL A 29 63.13 -103.05 REMARK 500 GLN A 44 -139.50 -131.44 REMARK 500 VAL A 85 -87.20 -117.08 REMARK 500 ALA A 87 -170.20 -48.60 REMARK 500 ARG A 88 88.48 -59.34 REMARK 500 LEU A 101 151.63 -49.23 REMARK 500 ASN A 118 53.65 -103.49 REMARK 500 THR A 151 94.11 -19.69 REMARK 500 GLU A 166 107.96 103.32 REMARK 500 HIS B 22 -36.17 -38.12 REMARK 500 VAL B 29 62.80 -104.33 REMARK 500 GLN B 44 -139.89 -131.93 REMARK 500 LYS B 46 13.96 58.80 REMARK 500 VAL B 85 -87.91 -118.82 REMARK 500 ALA B 87 -167.68 -46.98 REMARK 500 ARG B 88 89.47 -63.02 REMARK 500 LEU B 101 152.75 -44.86 REMARK 500 ASN B 118 52.51 -104.34 REMARK 500 THR B 151 93.35 -17.51 REMARK 500 GLU B 166 102.83 103.78 REMARK 500 ALA B 167 106.28 99.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O95 RELATED DB: PDB REMARK 900 THE LONGER DOMAIN OF THE SAME PROTEIN DBREF 2O96 A 1 177 UNP P51665 PSD7_HUMAN 1 177 DBREF 2O96 B 1 177 UNP P51665 PSD7_HUMAN 1 177 SEQADV 2O96 GLY A 0 UNP P51665 CLONING ARTIFACT SEQADV 2O96 GLY B 0 UNP P51665 CLONING ARTIFACT SEQRES 1 A 178 GLY MET PRO GLU LEU ALA VAL GLN LYS VAL VAL VAL HIS SEQRES 2 A 178 PRO LEU VAL LEU LEU SER VAL VAL ASP HIS PHE ASN ARG SEQRES 3 A 178 ILE GLY LYS VAL GLY ASN GLN LYS ARG VAL VAL GLY VAL SEQRES 4 A 178 LEU LEU GLY SER TRP GLN LYS LYS VAL LEU ASP VAL SER SEQRES 5 A 178 ASN SER PHE ALA VAL PRO PHE ASP GLU ASP ASP LYS ASP SEQRES 6 A 178 ASP SER VAL TRP PHE LEU ASP HIS ASP TYR LEU GLU ASN SEQRES 7 A 178 MET TYR GLY MET PHE LYS LYS VAL ASN ALA ARG GLU ARG SEQRES 8 A 178 ILE VAL GLY TRP TYR HIS THR GLY PRO LYS LEU HIS LYS SEQRES 9 A 178 ASN ASP ILE ALA ILE ASN GLU LEU MET LYS ARG TYR CYS SEQRES 10 A 178 PRO ASN SER VAL LEU VAL ILE ILE ASP VAL LYS PRO LYS SEQRES 11 A 178 ASP LEU GLY LEU PRO THR GLU ALA TYR ILE SER VAL GLU SEQRES 12 A 178 GLU VAL HIS ASP ASP GLY THR PRO THR SER LYS THR PHE SEQRES 13 A 178 GLU HIS VAL THR SER GLU ILE GLY ALA GLU GLU ALA GLU SEQRES 14 A 178 GLU VAL GLY VAL GLU HIS LEU LEU ARG SEQRES 1 B 178 GLY MET PRO GLU LEU ALA VAL GLN LYS VAL VAL VAL HIS SEQRES 2 B 178 PRO LEU VAL LEU LEU SER VAL VAL ASP HIS PHE ASN ARG SEQRES 3 B 178 ILE GLY LYS VAL GLY ASN GLN LYS ARG VAL VAL GLY VAL SEQRES 4 B 178 LEU LEU GLY SER TRP GLN LYS LYS VAL LEU ASP VAL SER SEQRES 5 B 178 ASN SER PHE ALA VAL PRO PHE ASP GLU ASP ASP LYS ASP SEQRES 6 B 178 ASP SER VAL TRP PHE LEU ASP HIS ASP TYR LEU GLU ASN SEQRES 7 B 178 MET TYR GLY MET PHE LYS LYS VAL ASN ALA ARG GLU ARG SEQRES 8 B 178 ILE VAL GLY TRP TYR HIS THR GLY PRO LYS LEU HIS LYS SEQRES 9 B 178 ASN ASP ILE ALA ILE ASN GLU LEU MET LYS ARG TYR CYS SEQRES 10 B 178 PRO ASN SER VAL LEU VAL ILE ILE ASP VAL LYS PRO LYS SEQRES 11 B 178 ASP LEU GLY LEU PRO THR GLU ALA TYR ILE SER VAL GLU SEQRES 12 B 178 GLU VAL HIS ASP ASP GLY THR PRO THR SER LYS THR PHE SEQRES 13 B 178 GLU HIS VAL THR SER GLU ILE GLY ALA GLU GLU ALA GLU SEQRES 14 B 178 GLU VAL GLY VAL GLU HIS LEU LEU ARG HELIX 1 1 HIS A 12 ILE A 26 1 15 HELIX 2 2 ASP A 71 VAL A 85 1 15 HELIX 3 3 ASN A 104 ARG A 114 1 11 HELIX 4 4 HIS B 12 ILE B 26 1 15 HELIX 5 5 ASP B 71 VAL B 85 1 15 HELIX 6 6 ASN B 104 ARG B 114 1 11 SHEET 1 A 8 LYS A 8 VAL A 11 0 SHEET 2 A 8 VAL A 47 ALA A 55 1 O LEU A 48 N LYS A 8 SHEET 3 A 8 VAL A 36 TRP A 43 -1 N LEU A 40 O ASN A 52 SHEET 4 A 8 ARG A 90 HIS A 96 -1 O ARG A 90 N GLY A 41 SHEET 5 A 8 VAL A 120 ILE A 124 1 O VAL A 122 N TRP A 94 SHEET 6 A 8 THR A 135 VAL A 141 -1 O TYR A 138 N LEU A 121 SHEET 7 A 8 THR A 154 ILE A 162 -1 O THR A 154 N VAL A 141 SHEET 8 A 8 LYS A 8 VAL A 11 1 N VAL A 9 O THR A 159 SHEET 1 B 2 PHE A 58 GLU A 60 0 SHEET 2 B 2 TRP A 68 LEU A 70 -1 O PHE A 69 N ASP A 59 SHEET 1 C 8 LYS B 8 VAL B 11 0 SHEET 2 C 8 VAL B 47 ALA B 55 1 O LEU B 48 N LYS B 8 SHEET 3 C 8 VAL B 36 TRP B 43 -1 N LEU B 40 O ASN B 52 SHEET 4 C 8 ARG B 90 HIS B 96 -1 O ARG B 90 N GLY B 41 SHEET 5 C 8 VAL B 120 ILE B 124 1 O VAL B 120 N TRP B 94 SHEET 6 C 8 THR B 135 VAL B 141 -1 O TYR B 138 N LEU B 121 SHEET 7 C 8 THR B 154 ILE B 162 -1 O THR B 154 N VAL B 141 SHEET 8 C 8 LYS B 8 VAL B 11 1 N VAL B 9 O THR B 159 SHEET 1 D 2 PHE B 58 GLU B 60 0 SHEET 2 D 2 TRP B 68 LEU B 70 -1 O PHE B 69 N ASP B 59 CISPEP 1 GLY A 98 PRO A 99 0 10.90 CISPEP 2 GLY B 98 PRO B 99 0 9.13 CRYST1 114.701 96.010 60.982 90.00 122.14 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008718 0.000000 0.005478 0.00000 SCALE2 0.000000 0.010416 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019367 0.00000