PDB Short entry for 2OZP HEADER OXIDOREDUCTASE 27-FEB-07 2OZP TITLE CRYSTAL STRUCTURE OF N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE TITLE 2 (TTHA1904) FROM THERMUS THERMOPHILUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.2.1.38; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS AMINO ACID BIOSYNTHESIS, STRUCTURAL GENOMICS, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.H.REHSE,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 2 (RSGI) REVDAT 5 25-OCT-17 2OZP 1 REMARK REVDAT 4 18-OCT-17 2OZP 1 REMARK REVDAT 3 13-JUL-11 2OZP 1 VERSN REVDAT 2 24-FEB-09 2OZP 1 VERSN REVDAT 1 28-AUG-07 2OZP 0 JRNL AUTH P.H.REHSE,S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE JRNL TITL 2 REDUCTASE (TTHA1904) FROM THERMUS THERMOPHILUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 35565 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 3227 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.65 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2401 REMARK 3 BIN FREE R VALUE : 0.3125 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 325 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2670 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 301 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.38700 REMARK 3 B22 (A**2) : -3.38700 REMARK 3 B33 (A**2) : 6.77400 REMARK 3 B12 (A**2) : -1.53300 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.19 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.24 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.93 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.935 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 52.21 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : LIG.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2OZP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000041785. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97882, 0.97935, 0.90000 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64827 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 126.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.30 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.00 REMARK 200 R MERGE FOR SHELL (I) : 0.48900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE 2.10, RESOLVE 2.10, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 80MM SODIUM HEPES, 1.6% PEG 400, 1.6M REMARK 280 AMMONIUM SULFATE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.75200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.37600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 56.75200 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.37600 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.75200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 28.37600 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 56.75200 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.37600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 23000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -191.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 72.47850 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 125.53644 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 56.75200 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 72.47850 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 125.53644 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 56.75200 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1094 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1271 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1282 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1294 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLY A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 105 CD CE NZ REMARK 470 ARG A 221 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 37 126.31 -171.42 REMARK 500 LYS A 204 84.44 -151.22 REMARK 500 VAL A 315 -91.06 -99.03 REMARK 500 THR A 318 -89.71 -145.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZI A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZI A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZI A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZI A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZI A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZI A 1008 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003000050.1 RELATED DB: TARGETDB DBREF 2OZP A 1 345 UNP Q5SH26 Q5SH26_THET8 1 345 SEQRES 1 A 345 MET THR GLY LYS LYS THR LEU SER ILE VAL GLY ALA SER SEQRES 2 A 345 GLY TYR ALA GLY GLY GLU PHE LEU ARG LEU ALA LEU SER SEQRES 3 A 345 HIS PRO TYR LEU GLU VAL LYS GLN VAL THR SER ARG ARG SEQRES 4 A 345 PHE ALA GLY GLU PRO VAL HIS PHE VAL HIS PRO ASN LEU SEQRES 5 A 345 ARG GLY ARG THR ASN LEU LYS PHE VAL PRO PRO GLU LYS SEQRES 6 A 345 LEU GLU PRO ALA ASP ILE LEU VAL LEU ALA LEU PRO HIS SEQRES 7 A 345 GLY VAL PHE ALA ARG GLU PHE ASP ARG TYR SER ALA LEU SEQRES 8 A 345 ALA PRO VAL LEU VAL ASP LEU SER ALA ASP PHE ARG LEU SEQRES 9 A 345 LYS ASP PRO GLU LEU TYR ARG ARG TYR TYR GLY GLU HIS SEQRES 10 A 345 PRO ARG PRO ASP LEU LEU GLY ARG PHE VAL TYR ALA VAL SEQRES 11 A 345 PRO GLU LEU TYR ARG GLU ALA LEU LYS GLY ALA ASP TRP SEQRES 12 A 345 ILE ALA GLY ALA GLY CYS ASN ALA THR ALA THR LEU LEU SEQRES 13 A 345 GLY LEU TYR PRO LEU LEU LYS ALA GLY VAL LEU LYS PRO SEQRES 14 A 345 THR PRO ILE PHE VAL THR LEU LEU ILE SER THR SER ALA SEQRES 15 A 345 GLY GLY ALA GLU ALA SER PRO ALA SER HIS HIS PRO GLU SEQRES 16 A 345 ARG ALA GLY SER ILE ARG VAL TYR LYS PRO THR GLY HIS SEQRES 17 A 345 ARG HIS THR ALA GLU VAL VAL GLU ASN LEU PRO GLY ARG SEQRES 18 A 345 PRO GLU VAL HIS LEU THR ALA ILE ALA THR ASP ARG VAL SEQRES 19 A 345 ARG GLY ILE LEU MSE THR ALA GLN CYS PHE VAL GLN ASP SEQRES 20 A 345 GLY TRP SER GLU ARG ASP VAL TRP GLN ALA TYR ARG GLU SEQRES 21 A 345 ALA TYR ALA GLY GLU PRO PHE ILE ARG LEU VAL LYS GLN SEQRES 22 A 345 LYS LYS GLY VAL HIS ARG TYR PRO ASP PRO ARG PHE VAL SEQRES 23 A 345 GLN GLY THR ASN TYR ALA ASP ILE GLY PHE GLU LEU GLU SEQRES 24 A 345 GLU ASP THR GLY ARG LEU VAL VAL MSE THR ALA ILE ASP SEQRES 25 A 345 ASN LEU VAL LYS GLY THR ALA GLY HIS ALA LEU GLN ALA SEQRES 26 A 345 LEU ASN VAL ARG MSE GLY TRP PRO GLU THR LEU GLY LEU SEQRES 27 A 345 ASP PHE PRO GLY LEU HIS PRO MODRES 2OZP MSE A 239 MET SELENOMETHIONINE MODRES 2OZP MSE A 308 MET SELENOMETHIONINE MODRES 2OZP MSE A 330 MET SELENOMETHIONINE HET MSE A 239 8 HET MSE A 308 8 HET MSE A 330 8 HET SO4 A1001 5 HET SO4 A1002 5 HET AZI A1003 3 HET AZI A1004 3 HET AZI A1005 3 HET AZI A1006 3 HET AZI A1007 3 HET AZI A1008 3 HET AZI A1009 3 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM AZI AZIDE ION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 AZI 7(N3 1-) FORMUL 11 HOH *301(H2 O) HELIX 1 1 GLY A 14 SER A 26 1 13 HELIX 2 2 PRO A 44 VAL A 48 5 5 HELIX 3 3 HIS A 49 ARG A 53 5 5 HELIX 4 4 PRO A 62 LEU A 66 5 5 HELIX 5 5 GLY A 79 GLU A 84 1 6 HELIX 6 6 GLU A 84 ALA A 90 1 7 HELIX 7 7 ASP A 106 GLY A 115 1 10 HELIX 8 8 ARG A 119 LEU A 123 5 5 HELIX 9 9 VAL A 130 GLY A 140 1 11 HELIX 10 10 GLY A 148 ALA A 164 1 17 HELIX 11 11 THR A 180 GLY A 184 5 5 HELIX 12 12 SER A 188 SER A 191 5 4 HELIX 13 13 HIS A 192 ALA A 197 1 6 HELIX 14 14 ARG A 209 ASN A 217 1 9 HELIX 15 15 SER A 250 ALA A 263 1 14 HELIX 16 16 ASP A 282 GLN A 287 1 6 HELIX 17 17 THR A 318 MSE A 330 1 13 SHEET 1 A 6 LEU A 30 VAL A 35 0 SHEET 2 A 6 LYS A 5 VAL A 10 1 N LEU A 7 O GLU A 31 SHEET 3 A 6 ILE A 71 LEU A 74 1 O VAL A 73 N VAL A 10 SHEET 4 A 6 VAL A 94 ASP A 97 1 O VAL A 96 N LEU A 74 SHEET 5 A 6 TRP A 143 ALA A 145 1 O ILE A 144 N LEU A 95 SHEET 6 A 6 VAL A 127 TYR A 128 1 N VAL A 127 O TRP A 143 SHEET 1 B 7 ARG A 201 LYS A 204 0 SHEET 2 B 7 VAL A 224 ALA A 230 -1 O ALA A 230 N ARG A 201 SHEET 3 B 7 ILE A 172 ILE A 178 1 N VAL A 174 O HIS A 225 SHEET 4 B 7 ILE A 237 PHE A 244 -1 O GLN A 242 N PHE A 173 SHEET 5 B 7 ARG A 304 ILE A 311 -1 O THR A 309 N MSE A 239 SHEET 6 B 7 ALA A 292 LEU A 298 -1 N GLY A 295 O MSE A 308 SHEET 7 B 7 ILE A 268 LEU A 270 1 N ARG A 269 O ILE A 294 LINK C LEU A 238 N MSE A 239 1555 1555 1.33 LINK C MSE A 239 N THR A 240 1555 1555 1.33 LINK C VAL A 307 N MSE A 308 1555 1555 1.33 LINK C MSE A 308 N THR A 309 1555 1555 1.32 LINK C ARG A 329 N MSE A 330 1555 1555 1.33 LINK C MSE A 330 N GLY A 331 1555 1555 1.33 CISPEP 1 HIS A 344 PRO A 345 0 -0.42 SITE 1 AC1 8 HIS A 78 ARG A 103 GLY A 148 CYS A 149 SITE 2 AC1 8 ARG A 209 HIS A 210 HOH A1021 HOH A1274 SITE 1 AC2 4 SER A 13 SER A 37 ARG A 38 ARG A 39 SITE 1 AC3 1 ARG A 135 SITE 1 AC4 8 GLY A 14 TYR A 15 ALA A 16 GLY A 184 SITE 2 AC4 8 ALA A 185 HOH A1059 HOH A1080 HOH A1134 SITE 1 AC5 2 ARG A 112 TYR A 113 SITE 1 AC6 4 ARG A 125 HOH A1102 HOH A1159 HOH A1304 SITE 1 AC7 1 ARG A 209 SITE 1 AC8 4 HIS A 46 ARG A 53 LYS A 272 GLN A 273 CRYST1 144.957 144.957 85.128 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006899 0.003983 0.000000 0.00000 SCALE2 0.000000 0.007966 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011747 0.00000